Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00439.1
CDS Infomation

gene=orange1.1t00439
Sequence

ATGTCACAGTGGCTGCATCAACGGCCGTTACACAATCCGTTACCAAATCCGTACCCTCTT
TCGCCGCGCAATTCAATGACCTTCCAATTCCAAAGACCAATGTTACTAGTTCTCAACCGA
ACAACTCTTCTAGTGTTACTCTCTCTCTTAGTCGTACTCGGCGTAATCCTCCCCTGGACT
GGAACCCCCGGGTTCATGTTCCCAAACGCTACTTCCTCTCTCGCTAAATGGCGTGACTAC
ACGCTGTCCCAAGCGGCGTCGTTTGTGGCTAAGAACGGCACTATTATCGTCTGCGCTGTG
AGTCAGCCTTACTTGCCGTTTCTAAACAACTGGTTGATTAGTATTTCGAGACAAAAGCAC
CAAGATCAAGTGCTGGTTATTGCAGAGGATTACGCCACTCTTTATAAAGTGAACGGGAGA
TGGCCTGGTCACGCTGTCCTCGTGCCGCCTGCTCCCGATTCACAAACTGCCCATAAGTTT
GGCTCTCAGGGATTCTTCAATTTTACATCTCGGAGGCCTTGTCATCTGCTGCACATATTA
GAGCTTGGGTATAACGTTATGTACAATGATGTTGATATGGTTTGGTTGAAAGATCCCTTT
CCCTATCTCCAGGGCGATCACGATGTGTACTTTACTGATGACATGGCTGCTGTGAAGCCT
CTTGATCATTCGCATGATCTGCCGCCTCCAGGAAAAAAAGGCCGCACTTACATTTGTAGT
TGTATGATTTACCTGCGTCCCACTGATGGTGCAAAGCTAGTCATGAAGAAATGGATTGAG
GAGCTTCAGGCTGAACCTTGGTCCAAGGCAAAGAAAGCAAATGATCAGCCTGCATTTAAT
TGGGCACTGAATAAAACTGCTGGACAGGTGGATCTCTACCTGCTACCCCAGTCAGCATTT
CCAACTGGGGGATTGTACTTTAAAAACCAGACATGGGTTGAAGAAACTAAAGGAAAGCAT
GTAATTATCCACAATAATTACATCACAGGTTTTGAGAAAAAGATAAAGAGATTCCGTGAT
TTTGGTCTCTGGTTGGTTGATGATCATGCTGTCGAGTCCCCCTTAGGCAAGTTGTAA

Peptide Sequence

PEP ID

orange1.1t00439.1
PEP Infomation
Sequence

MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWT
GTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKH
QDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHIL
ELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICS
CMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVDLYLLPQSAF
PTGGLYFKNQTWVEETKGKHVIIHNNYITGFEKKIKRFRDFGLWLVDDHAVESPLGKL*

Transcript Sequence

Transcript ID

orange1.1t00439.1
Transcript Infomation

gene=orange1.1t00439 CDS=168-1244
Sequence

ACTGACAACACACCGACAGACCGGACACTGAAGCTGGAATCGCAAACCCGATATTACAGA
TCCAAATCTGAAAAATCTGAGCAGTCAGCTCACTGATTCAAAATATCATCAATACTCCTT
CCTTCGATTCCTTGTATCTTTTCTACTTGGTTAAAATTGCGACAACAATGTCACAGTGGC
TGCATCAACGGCCGTTACACAATCCGTTACCAAATCCGTACCCTCTTTCGCCGCGCAATT
CAATGACCTTCCAATTCCAAAGACCAATGTTACTAGTTCTCAACCGAACAACTCTTCTAG
TGTTACTCTCTCTCTTAGTCGTACTCGGCGTAATCCTCCCCTGGACTGGAACCCCCGGGT
TCATGTTCCCAAACGCTACTTCCTCTCTCGCTAAATGGCGTGACTACACGCTGTCCCAAG
CGGCGTCGTTTGTGGCTAAGAACGGCACTATTATCGTCTGCGCTGTGAGTCAGCCTTACT
TGCCGTTTCTAAACAACTGGTTGATTAGTATTTCGAGACAAAAGCACCAAGATCAAGTGC
TGGTTATTGCAGAGGATTACGCCACTCTTTATAAAGTGAACGGGAGATGGCCTGGTCACG
CTGTCCTCGTGCCGCCTGCTCCCGATTCACAAACTGCCCATAAGTTTGGCTCTCAGGGAT
TCTTCAATTTTACATCTCGGAGGCCTTGTCATCTGCTGCACATATTAGAGCTTGGGTATA
ACGTTATGTACAATGATGTTGATATGGTTTGGTTGAAAGATCCCTTTCCCTATCTCCAGG
GCGATCACGATGTGTACTTTACTGATGACATGGCTGCTGTGAAGCCTCTTGATCATTCGC
ATGATCTGCCGCCTCCAGGAAAAAAAGGCCGCACTTACATTTGTAGTTGTATGATTTACC
TGCGTCCCACTGATGGTGCAAAGCTAGTCATGAAGAAATGGATTGAGGAGCTTCAGGCTG
AACCTTGGTCCAAGGCAAAGAAAGCAAATGATCAGCCTGCATTTAATTGGGCACTGAATA
AAACTGCTGGACAGGTGGATCTCTACCTGCTACCCCAGTCAGCATTTCCAACTGGGGGAT
TGTACTTTAAAAACCAGACATGGGTTGAAGAAACTAAAGGAAAGCATGTAATTATCCACA
ATAATTACATCACAGGTTTTGAGAAAAAGATAAAGAGATTCCGTGATTTTGGTCTCTGGT
TGGTTGATGATCATGCTGTCGAGTCCCCCTTAGGCAAGTTGTAACAATCTGGGGAAACAT
ATGATCTCTTTCTGCAGGACCAATAGTCCTTAGTGAACCTTAAATGGAGTTTGACTTGCC
AATTGGATCGTCTTGGTGCTCATCAGGGGCGCCATGGAATCAAAGGGCAACATTTCAAGA
TTCAGCCGCTAAGAAGCTCATTGTTTCATTTGTTTCTGACGGGGTTTGTTTGCACAAAGT
CCATGTAATTTATTGGAAATGTTTTGATAGCGCTTGTGCACTTCAGAAATTCTTTCAACA
TGTAACCCCCATCAGATTGCTGGCGGGTCGCCAACTTTTTGATGGAAATATGCCTCTTGA
TAAGAATTGTTTTCTATAAAAATATTAATATATCTATAAGATGATAATGAATAAATGTTG
TGCCA