Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00438.5
CDS Infomation

gene=orange1.1t00438
Sequence

ATGGTACTTGATAACCTAAAAGACTATGCTGTAAGAGCGCTGGTCAATGCTGTTGATCAC
CTTGGCACTGTGGCTTACAAGTTAACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCA
ACCATGGAGCTAAGGGTTTCTTGTATGAACCAGAAACTTCTTACATGCCAAACCTACTCA
AATAAAGAAGGTCTCCGGCAGCAACAGTTATTGGCGTTCATCCCAAGACATCACAAGCAT
TACATTTTACCAAATTCTGTGAACAAGAAGGTACATTTTAGTCCACGTGTACCAACTGAT
GCTAGGCAAAATCATTTTTCATCACGTCTTCAACCTACAGGTATCCCTGCTTCTAAAACT
CTTTCCTGGCATTTAGCCTCTGAAACTAAATCCACATCGAAGGGGACTCAGCAGGCTTTG
ACAAGCTCTGAAGACCGCAAAACTTCTGGAGTTTTCCATCTGTTGGATAATGAAGAGAAT
AAGCTGACAAAGTCCTCTGCTGTCTCTGCTCAATTATCAAGTGGAGGTCCTGCATCTAGT
GCACTTGTGCAATCGTTCGGTGTTGCACGCAGGGACGCAATGGAGGGTAACAAAACTTTG
GCACCATTTAGATCATTTGACAACCCAAGGCGTGAGATTGTACGTGCCCCTGTTCGCAGC
AAAAGTGTGCTATCAGCTTTCTTTGTTAAACAGAAAACGTCTAAGCTGAAGGCTGGTTAT
GTCTCATGA

Peptide Sequence

PEP ID

orange1.1t00438.5
PEP Infomation
Sequence

MVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYS
NKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDARQNHFSSRLQPTGIPASKT
LSWHLASETKSTSKGTQQALTSSEDRKTSGVFHLLDNEENKLTKSSAVSAQLSSGGPASS
ALVQSFGVARRDAMEGNKTLAPFRSFDNPRREIVRAPVRSKSVLSAFFVKQKTSKLKAGY
VS*

Transcript Sequence

Transcript ID

orange1.1t00438.5
Transcript Infomation

gene=orange1.1t00438 CDS=577-1305
Sequence

GTTCTCCTAACTGATCTTAATTAGTGTCATTTCTGTTGAATGAATCAAAATACTTTGGTT
AGTGTTTTATTCTGCATTGAGTGGAATTTTCCAGAGAAGCAAGTTAGTGAGAAGTTAACT
GACCCCTTGAATAAAATATTAACTTTATGAGGCCTCTTAAATTTGACTTTTTGAACTAGG
ATATTAAAAAAAAATTGTCGGGGGAAGCTATCTGATGCAGGAAAATGAAAAAATATACCA
TGGCCCTTAGAAAATGGCTTGTACTGATATTTGCTGTTGTTTATGAGTGGCCTGTTATTA
AATGAACCTGTAAAGATCATATATTCAACATGCTTGGGATCTTTTGATTGGATGCTGTCC
TCTCTTTTTATTTGGACTTGACTCTCTTGTAGTATACTCTGTTGAATAATTCCAGCTTGA
CCAATGTGAACACACTATTTGGATGGAAAACTTTGCTTCCATATAAGTTTAATGATCATG
CCATTTTCCTGACAGGAGCTCAAGAACTTAAGACCTCAACTGTATTCAGCTGCAGAATAT
TGTGAAAAGTCTTATCTTCACAGTGAGCAGAAACAAATGGTACTTGATAACCTAAAAGAC
TATGCTGTAAGAGCGCTGGTCAATGCTGTTGATCACCTTGGCACTGTGGCTTACAAGTTA
ACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCAACCATGGAGCTAAGGGTTTCTTGT
ATGAACCAGAAACTTCTTACATGCCAAACCTACTCAAATAAAGAAGGTCTCCGGCAGCAA
CAGTTATTGGCGTTCATCCCAAGACATCACAAGCATTACATTTTACCAAATTCTGTGAAC
AAGAAGGTACATTTTAGTCCACGTGTACCAACTGATGCTAGGCAAAATCATTTTTCATCA
CGTCTTCAACCTACAGGTATCCCTGCTTCTAAAACTCTTTCCTGGCATTTAGCCTCTGAA
ACTAAATCCACATCGAAGGGGACTCAGCAGGCTTTGACAAGCTCTGAAGACCGCAAAACT
TCTGGAGTTTTCCATCTGTTGGATAATGAAGAGAATAAGCTGACAAAGTCCTCTGCTGTC
TCTGCTCAATTATCAAGTGGAGGTCCTGCATCTAGTGCACTTGTGCAATCGTTCGGTGTT
GCACGCAGGGACGCAATGGAGGGTAACAAAACTTTGGCACCATTTAGATCATTTGACAAC
CCAAGGCGTGAGATTGTACGTGCCCCTGTTCGCAGCAAAAGTGTGCTATCAGCTTTCTTT
GTTAAACAGAAAACGTCTAAGCTGAAGGCTGGTTATGTCTCATGAATACTTATCAAGGCA
AGTCAAACATGTCAATTAGGAGAAGTTGCCATCAGTTATCATCTCATATGATTGTTGATA
GCGAGCTAGCTAATGTCAATCATCTCATATGATTGTTGATAATGAGCTGGTTTAATCAAT
TATTGTTTCTTCTACTCCAATCTTTTTCTCTTGGTGGCGTAATAATTGAGCAAATTGTGT
ATAAACTCCCATAATGAAGATCATTAACATGTCTGCTCACTGTATTGTAGCTCTGGTAAA
TGATTGTTGAAATCTAGTTGTGTAGATTACCAAACTCTTTCAACTGTCCAACATATATTT
GTAATGATTTAGGTGATGTTGATAATGCCAGTGATGAAGCTTGTAAACTATGCACCTCTT
TCATTATGCTTATTTTATTTTATTTCCAGATCTCAAGAGGACATGTGAGTACTGATGAGG
GCTGGAGATGAACTAGCCACCATAAATATGACTAGAATTGTTTGTTATTTCTGTATCTCA
GGCATGTGTTTGCAGTACATATTGCATCTGTACTCACATGGGGACCCAACCAAAATGAAG
ATTGAAGAACTAGGTTACCTTTAAGTTAGATTCTACAGTTCTGGTCTGTATGTATAGAAG
AAGATTAGGTTGCATTCTATCACTGAAAATTGAATATCTTATTATTTACATAAGAATCTG
AAATCCTTTTAAGGCCCAATTTGATAGTAAGATGTTGTAGTTTAAAAGTCATAGTTGTTG
TAAAATAAAATAAATAGTTGTTGTAAAAT