Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00421.2
CDS Infomation

gene=orange1.1t00421
Sequence

ATGGCAGAACAGCACGTATCATTGAAGCGTGTGCAGGTAGCGCAGCCGAAACACTTGTTC
AAACAAACTCAACTACTTGTTACCCTAACACAACACTACTCTCGGATTCTCAACAACTCC
AATATGTCATTCTCTAGAATCAACAGAGCTCGACCACTCCTTGTTCGCTGCATGAGCAAT
ATCCCCGAGAATTCCGTATACGGTGGGCCAAAGCCTCAGAATCCAAACCAGCGAGTAACT
CTCACGCACCTGAGACAGAAACACAAGAACGGAGAGCCCATTACAATGGTCACCGCCTAT
GACTATCCCTCGGCGGTGCACCTCGACAGTGCGGGCATTGATATATGTTTGGTCGGTGAC
TCAGCGGCCATGGTCGTTCACGGTCACGACACTACGTTGCCCATCACTCTCGAGGAAATG
CTTGTCCATTGCCGCGCTGTTGCTCGTGGCGCTAAGAGACCGTTACTTGTCGGGGATTTG
CCTTTCGGGACTTACGAGTCTAGCACCAATCAGGCAGTTGATACGGCAGTTAGGATTTTG
AAAGAAGGAGGAATGGACGCTATTAAACTTGAGGGAGGGTCGCCATCACGAATTACAGCA
GCAAGAGGAATTGTTGAAGCTGGAATTGCAGTTATGGGGCATGTGGGACTTACCCCTCAA
GCCATTAGTGTTCTTGGGGGATTCAGGCCTCAAGGGAAAAATGTTACTAGTGCTGTCAAG
GTTGTGGAGACTGCTCTGGCTTTGCAAGAAGTCGGATGTTTCTCAGTTGTTTTGGAATGT
GTGCCCCCGCCTGTGGCTGCTGCAGCTACATCTGCTCTTCAAATTCCTACCATTGGCATT
GGAGCTGGACCCTTCTGCAGTGGCCAGGTGCTAGTTTACCATGATCTTTTAGGGATGATG
CAACACCCACATCATGCCAAGGTCACTCCGAAGTTCTGCAAGCAGTTTGCACGTGTTGGA
GATGTCATAAACAAAGCTCTATTGGAGTACAAGGAAGAAGTAACAAATGGTTCATTCCCT
GGTCCCAGTCACAGCCCTTATAAAATGTCTAGTAGTGATTGTAATGGTTTCTTCAATGAG
TTACAGAAGCTGGGTTTCGACAAAGCAGCAGCGGTGGCTGCTGAAGCAGCTGAGAAGATT
GATACAGCTAAATAA

Peptide Sequence

PEP ID

orange1.1t00421.2
PEP Infomation
Sequence

MAEQHVSLKRVQVAQPKHLFKQTQLLVTLTQHYSRILNNSNMSFSRINRARPLLVRCMSN
IPENSVYGGPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGD
SAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRIL
KEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVK
VVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMM
QHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNE
LQKLGFDKAAAVAAEAAEKIDTAK*

Transcript Sequence

Transcript ID

orange1.1t00421.2
Transcript Infomation

gene=orange1.1t00421 CDS=20-1174
Sequence

AAAAAACTGATAAATCTACATGGCAGAACAGCACGTATCATTGAAGCGTGTGCAGGTAGC
GCAGCCGAAACACTTGTTCAAACAAACTCAACTACTTGTTACCCTAACACAACACTACTC
TCGGATTCTCAACAACTCCAATATGTCATTCTCTAGAATCAACAGAGCTCGACCACTCCT
TGTTCGCTGCATGAGCAATATCCCCGAGAATTCCGTATACGGTGGGCCAAAGCCTCAGAA
TCCAAACCAGCGAGTAACTCTCACGCACCTGAGACAGAAACACAAGAACGGAGAGCCCAT
TACAATGGTCACCGCCTATGACTATCCCTCGGCGGTGCACCTCGACAGTGCGGGCATTGA
TATATGTTTGGTCGGTGACTCAGCGGCCATGGTCGTTCACGGTCACGACACTACGTTGCC
CATCACTCTCGAGGAAATGCTTGTCCATTGCCGCGCTGTTGCTCGTGGCGCTAAGAGACC
GTTACTTGTCGGGGATTTGCCTTTCGGGACTTACGAGTCTAGCACCAATCAGGCAGTTGA
TACGGCAGTTAGGATTTTGAAAGAAGGAGGAATGGACGCTATTAAACTTGAGGGAGGGTC
GCCATCACGAATTACAGCAGCAAGAGGAATTGTTGAAGCTGGAATTGCAGTTATGGGGCA
TGTGGGACTTACCCCTCAAGCCATTAGTGTTCTTGGGGGATTCAGGCCTCAAGGGAAAAA
TGTTACTAGTGCTGTCAAGGTTGTGGAGACTGCTCTGGCTTTGCAAGAAGTCGGATGTTT
CTCAGTTGTTTTGGAATGTGTGCCCCCGCCTGTGGCTGCTGCAGCTACATCTGCTCTTCA
AATTCCTACCATTGGCATTGGAGCTGGACCCTTCTGCAGTGGCCAGGTGCTAGTTTACCA
TGATCTTTTAGGGATGATGCAACACCCACATCATGCCAAGGTCACTCCGAAGTTCTGCAA
GCAGTTTGCACGTGTTGGAGATGTCATAAACAAAGCTCTATTGGAGTACAAGGAAGAAGT
AACAAATGGTTCATTCCCTGGTCCCAGTCACAGCCCTTATAAAATGTCTAGTAGTGATTG
TAATGGTTTCTTCAATGAGTTACAGAAGCTGGGTTTCGACAAAGCAGCAGCGGTGGCTGC
TGAAGCAGCTGAGAAGATTGATACAGCTAAATAACCTGATGAAGGAAATTCAGCAAGGCA
ATGAATATGCTCAATCCAGCCAGAGAGCCACTTTCACTCGGCTCCTCTTTCGCTGATTAA
ACAAAGTGTAGAAGCTACAAATAACAGTGGCGTTTTGGGCTGTTTTGGTTGTCTTATGAC
ATTAACTTATTTGATTAGCATGGTTGTAGTTTTTGAACAAACTGAAATACACAGAATAAA
TAGATAAAGAAGACGCCGTTACTTATACAATGGCGATACTTTTACCGTATTGATTCTCAT