Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00411.2
CDS Infomation

gene=orange1.1t00411
Sequence

ATGGTGTCCGTGAACCCGAACCCGGCTCAAGGCTTTTTCTTCTTCGATCCCATGAATATG
GGGCATCCCGGTCCGAATTCTCTCCCGCCAACTGGTAGTTACAACGCCGCGACGACGACG
AATGATTCTACTACTGCCTCAGCTTCGACTAAAAGTACAGGTGCAATAAATACTATGTCG
TTTGCGGAGGATCCGAGTAAGAAGATTCGGAAGCCGTACACAATTACTAAATCTAGAGAG
AGCTGGACGGAACAAGAGCACGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGTGAC
TGGAAGAAGATTGAAGCATTTATTGGATCCAAGACTGTCATTCAGATACGAAGTCATGCA
CAAAAGTACTTTCTAAAGGTTCAGAAGAATGGGACAAGTGAACATGTACCTCCCCCTCGA
CCAAAGAGAAAAGCAGCTCATCCATACCCACAAAAAGCACCTAAAACTGTTCATGGTGTA
TCACAATTTGGTGGGCAAGTTCAATCATCAGCAGCTCTGCTTGAACCAGGATATATTTAC
AGGCCAGACTCTTCATCTGTGCTTGGAAATCCGGTTCCTGTTGCGGCCTTGTCGTCCTGG
AGTTATGACTCAGTGCCACCAGTGAATGTATCGCAAGTGACTAAAGATGATGTGGGATTG
CCTGGATCAAGCAACGCTCAGAATTTCTGCTACAGTAGTAGTAATGACAGCACTCTAAGA
ACTTGGCCAGTTGGTGAAACAATTGATCGAGGGGATCACGGAAAACCCCGAAGAGTTATG
CCTGATTTTGCTCAAGTTTACAGCTTCCTTGGCAGTGTCTTTGACCCCAATTCAACTGGT
CACATTCAGAGATTGAAGCAGATGGATCCAATAAATTTTGAAACTGTATTGTTGTTGATG
AGAAATCTTGCCATCAACTTGACTAGTCCTGAGTTTGAGGACCACAAAAGGTTGCTTTCG
CTTTATGATGTAGAATCTGAGAGGAATAAATTTGGTAGTCTGCACGCTGGTAACTCAGAA
AGTGCCATTCCATCAGCGTAA

Peptide Sequence

PEP ID

orange1.1t00411.2
PEP Infomation
Sequence

MVSVNPNPAQGFFFFDPMNMGHPGPNSLPPTGSYNAATTTNDSTTASASTKSTGAINTMS
FAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHA
QKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKTVHGVSQFGGQVQSSAALLEPGYIY
RPDSSSVLGNPVPVAALSSWSYDSVPPVNVSQVTKDDVGLPGSSNAQNFCYSSSNDSTLR
TWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPINFETVLLLM
RNLAINLTSPEFEDHKRLLSLYDVESERNKFGSLHAGNSESAIPSA*

Transcript Sequence

Transcript ID

orange1.1t00411.2
Transcript Infomation

gene=orange1.1t00411 CDS=115-1155
Sequence

GAGACTACCCTCGTCAATCTCATTCTTGTCTGACTCACCAAAAGCTAAGATCAAGGCAAA
AACGAATATTACAATTGAAAACAGAAACTCGATCAGCATTTAACGAATTAGCTTATGGTG
TCCGTGAACCCGAACCCGGCTCAAGGCTTTTTCTTCTTCGATCCCATGAATATGGGGCAT
CCCGGTCCGAATTCTCTCCCGCCAACTGGTAGTTACAACGCCGCGACGACGACGAATGAT
TCTACTACTGCCTCAGCTTCGACTAAAAGTACAGGTGCAATAAATACTATGTCGTTTGCG
GAGGATCCGAGTAAGAAGATTCGGAAGCCGTACACAATTACTAAATCTAGAGAGAGCTGG
ACGGAACAAGAGCACGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGTGACTGGAAG
AAGATTGAAGCATTTATTGGATCCAAGACTGTCATTCAGATACGAAGTCATGCACAAAAG
TACTTTCTAAAGGTTCAGAAGAATGGGACAAGTGAACATGTACCTCCCCCTCGACCAAAG
AGAAAAGCAGCTCATCCATACCCACAAAAAGCACCTAAAACTGTTCATGGTGTATCACAA
TTTGGTGGGCAAGTTCAATCATCAGCAGCTCTGCTTGAACCAGGATATATTTACAGGCCA
GACTCTTCATCTGTGCTTGGAAATCCGGTTCCTGTTGCGGCCTTGTCGTCCTGGAGTTAT
GACTCAGTGCCACCAGTGAATGTATCGCAAGTGACTAAAGATGATGTGGGATTGCCTGGA
TCAAGCAACGCTCAGAATTTCTGCTACAGTAGTAGTAATGACAGCACTCTAAGAACTTGG
CCAGTTGGTGAAACAATTGATCGAGGGGATCACGGAAAACCCCGAAGAGTTATGCCTGAT
TTTGCTCAAGTTTACAGCTTCCTTGGCAGTGTCTTTGACCCCAATTCAACTGGTCACATT
CAGAGATTGAAGCAGATGGATCCAATAAATTTTGAAACTGTATTGTTGTTGATGAGAAAT
CTTGCCATCAACTTGACTAGTCCTGAGTTTGAGGACCACAAAAGGTTGCTTTCGCTTTAT
GATGTAGAATCTGAGAGGAATAAATTTGGTAGTCTGCACGCTGGTAACTCAGAAAGTGCC
ATTCCATCAGCGTAAAAGGTGAAATAATATAGGAAGATATTTCTTATTGTATGCATAATT
ATATTTTGTTCGGTGAATCATCCTGGGCTGCTGCTGACCATGAATTTTGAATATCAGGGA
AAATTTCGGTTTCACATTCCGTTGCCAGCAAGTACAGTACTGGAGTGATATATATATATA
TGTAAATAAGTTTGTGTTGACATAGACATGTGATTGTGATCTGCATGGTTAGTACATCTA
GCACATAGGCTGTTGGTCACTGAACAAGGTTTTTTCTTCTTCCTTCTTCTTGGCCTATAT
GTGTATATGATATAGAAAGATTTCTTGTTTATGTGAAAATGTCTTACGATTTTTGTTCAG
AGGCTTTCTTGTATAGAGATTTGAGTGACCTTAAAAGAGTTTTTCATTATTATATATTGT
AGGAAGGTTTATAGTTGGGATTTGTGAATGTAATTTCTGGATCTGTGTGTGTGAGAGAGG
TTGGATTTAACTAGAGTGGCTCTTATGCAAGAGAGCCACATACTCCATTTTCTTGTTCCT
TTTTTTTTTTTTAACTTGCTCTGTTCAGGTGCTTAAACATTTCACTCTGGCTGGCAATGA
TACGTGTTTGGTGAGCCAACCGTCTACAGATAACCCAAACTCAGTTGAACGATTGGCCGC
CCTTTTCAGAAATCATGCACGTTTAGTTGTGTTGGAGTGCGCGAGATTGGTGAACAAAAT
TAAATTGGATATGATTAGATTACATTTAGTTGTATTTGATATTGTGTAGTCCAAGGTGGG
ATATATGATTATTTAAATGATTTTTTCTTTAAAAAATAATGTTTTTAATGAGTAATTTCA
GTTAGCGCAAATGAAAACTAATTAAACATAAAA