Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00408.1
CDS Infomation

gene=orange1.1t00408
Sequence

ATGATATGCTTAAGTCAGTTTGCATTGGGGAGAGCACCACCAATGGCAAAACCCTCGGTT
TTCAGAGCTGAACATCCCATGGCTCTTGATCTTTCTCCCAACCCGATCTCCCACGGTGCC
GCCTCCTCTTCTCGCCGTCGCGATCTCGTGTTCGTCGTCAATCCTCGAGGTGCTAGTGGG
AGAACGGGTAAGGAATGGAAAAAATTGCTTCCATACCTTAGGTCTCGTCTTAGTGTCGAT
TGTAATATATGTGAATCTTTGACTTCTGGTCCTTCTCACGCGATCGACATAACAAGAGAG
GCTATAAAGGAGGGTGCTGATGCTGTAATTGCTGTTGGAGGTGATGGAACTCTTCATGAG
GTTGTTAATGGATTTTTCTCGGCTGGAAAACTGGTTACTAACCACAATAGAGAGTCTGCT
CATTCAACTGCACTTGGTCTTATCCCCTTAGGTACTGGGTCTGATTTTGCCAGGACATTT
GGCTGGAGAAATGATCCTTATGAGGCAGTTGAACGCATAGCCAAAGGGGTACGATCATGG
GTAGATGTTGGTGTTATTAATGGAGAAACCGGAGAACCTCATTACTTCATAAACGTTGCG
GACCTTCATTTGAGTGCAAAGGCAGGATATTATGCCTCAAGATATAAGAGATTTGGAAAC
TTATGCTATGTAATTGGTGCTTTGCAAGCTTTTATGGGCCATCGAAACCAGGACCTTAGA
GTCAAGGTTAATGAGGGTGAGTGGGAAGAATATTCTCAAGTGACAGCCCTTTGCATTGGC
AATGCAAAATACTTTGGTGGCGGTATGAAAATTACTCCAAATGCTGATCCTCGCAATGGG
TATTTTGAGGTTGTGATTCTTCAGGACTTTAAGTGGTATGACTTCATTCTGAAACTACTT
AAGCTGTACAATGGGACACATTTATCAGTGAAAAATGTAACATCAAGAAGAGCACATTCT
ATTGAAGTGGAGGATATTTCAAGTGGGGATAGCATTTATGTACAATCAGATGGCGAACAT
TTAGGATTCCTTCCTAGGAAGTTGTGTGTTTTGCCTGCTGCCATTGAGATGATATGCTGA

Peptide Sequence

PEP ID

orange1.1t00408.1
PEP Infomation
Sequence

MICLSQFALGRAPPMAKPSVFRAEHPMALDLSPNPISHGAASSSRRRDLVFVVNPRGASG
RTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHE
VVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSW
VDVGVINGETGEPHYFINVADLHLSAKAGYYASRYKRFGNLCYVIGALQAFMGHRNQDLR
VKVNEGEWEEYSQVTALCIGNAKYFGGGMKITPNADPRNGYFEVVILQDFKWYDFILKLL
KLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGFLPRKLCVLPAAIEMIC*

Transcript Sequence

Transcript ID

orange1.1t00408.1
Transcript Infomation

gene=orange1.1t00408 CDS=104-1183
Sequence

GTTCTGAACCAAGAGTGGCCAGCTTGGCAAGAAGCAAACAAAATATTTGGGGGGCGCTAA
ACAAGAAAGCGAAAGCAATTAACAAAAGCCAGATGAAAGAGAAATGATATGCTTAAGTCA
GTTTGCATTGGGGAGAGCACCACCAATGGCAAAACCCTCGGTTTTCAGAGCTGAACATCC
CATGGCTCTTGATCTTTCTCCCAACCCGATCTCCCACGGTGCCGCCTCCTCTTCTCGCCG
TCGCGATCTCGTGTTCGTCGTCAATCCTCGAGGTGCTAGTGGGAGAACGGGTAAGGAATG
GAAAAAATTGCTTCCATACCTTAGGTCTCGTCTTAGTGTCGATTGTAATATATGTGAATC
TTTGACTTCTGGTCCTTCTCACGCGATCGACATAACAAGAGAGGCTATAAAGGAGGGTGC
TGATGCTGTAATTGCTGTTGGAGGTGATGGAACTCTTCATGAGGTTGTTAATGGATTTTT
CTCGGCTGGAAAACTGGTTACTAACCACAATAGAGAGTCTGCTCATTCAACTGCACTTGG
TCTTATCCCCTTAGGTACTGGGTCTGATTTTGCCAGGACATTTGGCTGGAGAAATGATCC
TTATGAGGCAGTTGAACGCATAGCCAAAGGGGTACGATCATGGGTAGATGTTGGTGTTAT
TAATGGAGAAACCGGAGAACCTCATTACTTCATAAACGTTGCGGACCTTCATTTGAGTGC
AAAGGCAGGATATTATGCCTCAAGATATAAGAGATTTGGAAACTTATGCTATGTAATTGG
TGCTTTGCAAGCTTTTATGGGCCATCGAAACCAGGACCTTAGAGTCAAGGTTAATGAGGG
TGAGTGGGAAGAATATTCTCAAGTGACAGCCCTTTGCATTGGCAATGCAAAATACTTTGG
TGGCGGTATGAAAATTACTCCAAATGCTGATCCTCGCAATGGGTATTTTGAGGTTGTGAT
TCTTCAGGACTTTAAGTGGTATGACTTCATTCTGAAACTACTTAAGCTGTACAATGGGAC
ACATTTATCAGTGAAAAATGTAACATCAAGAAGAGCACATTCTATTGAAGTGGAGGATAT
TTCAAGTGGGGATAGCATTTATGTACAATCAGATGGCGAACATTTAGGATTCCTTCCTAG
GAAGTTGTGTGTTTTGCCTGCTGCCATTGAGATGATATGCTGAAGTGAGCAGAGTAACAC
ATCTGATTATGTGATATGTGATTGTTGTAACCATTGCTTGAAAGTGTTGCATCTCACTGT
CCAGCCTTCAAGGCTCACTTATTCTGACTTTGGAGACATACTTGGGAACGCAGAATAAGA
TGAAGTGGCAAAAAATGAGTAGGGAAGATAGGTTTAGGGAGTTTTCTGGGAGCAGGATCA
TGTGCAGCTTGAATTTTTTTGTGAAAGGTGAAACTTTTATACTTCCAACTGTGGAATACG
CAGGGCCCATTTTTTGTAACTTAGTAGTGTTCTAGTCCTGGATTTCCTTCGATTTGACAT
TCTGTAATCTGCTCCTTTTAGCCTGGTAACCTCTGTTTCAAACAGAGCGCTCGGTTGTTC
TTTACAGAATAGACAGTTTTGTGAAATATCATAACTTATTACTCCAGCAGGGAGTAAACT
GTTGTATGTAATTCATTCGTTTGCATTCAACAGGGCTTTCCAAGAATACAACAAACCTTT
CATATTCCCTGACCCTTGTTGTGAATGTTGGTAAAATAAGATGAATTTTCTTTTCTGCAT
GCCCAAGAACCCTTGAGCCGTAGTGCAAAATTATTGAATCACTAAAAAGGAGAGATCAGA
TGCCGTGAACTTTTGTAGTAAGCAGTACGTAGGTGGGTGG