Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00404.2
CDS Infomation

gene=orange1.1t00404
Sequence

ATGAGTCGCCCCCAGGATCCACACCGTCCTTTCTTCCCATTTGGAAATCCTTTTCGGATG
ATGTCCCCCAAAGGTTCTCGTTTGTCTCCCAAGCTTGTATCTCTGTTGGCTGATTTTGAG
GAGACCTTGGCAGAGAGGCTGAGAAAACTTATGCCGAAAGACAAGGATGATATCCTCAAC
TTATCATGGATGAGACTGGCAATGGAGTCACTTTGTGAGACTCACAATGTCATAAAAGAC
CTTATAACTGAGTTGGAGCTTCCTGTAAGTGACTGGGATGAGAAATGGATAGACGTGTAC
TTAGACATCAGTGTAAACTTGCTTGATATATGCATTGCTTTTAGCTCTGTTCTCACGAAG
GTCAGCCAAGGCCACCTATTGCTTCAGTGTGTCTTGCACACTTTGGATTCTTCCTCTCCA
ACACAGTTTGGGCGAGCCTGTTCTTCTCTTGATAACTGGAGGGAGCACATTAGTTCAAAG
AACCCCAGAGTTGAGAGCTGTCGTTCAATCTTAGACAATCTGGTAGCTTCTTTGGATTTG
CCCAAGGTTAAGAACTCAGCCAAAGGGAAGGTTTTGATGCGCGCAATGTATGGGGTTAAG
GTGTTGACTGTATTTGTTTGTAGTATTTTTGCTGCAGCCTTCTCTGGATCAGCCAAGAAT
TTGTTAGAACTGAACGTTTCTGACACATTACCTTGGGCACCAGCATTTTCTGCCTTGCAA
GCTAATGTGAATGCAGAAGTTAGGAACATATTATCCTCTGGAAGAGCTACAGTTTTGAAC
GAACTAGAGGCTGTTGATGGGAGCGTTAAGAAATTGTATGAGGTGATTCAAAATGAGGTT
GACACTGTTGAAGAGGAACTGCTCCAGAAATCTGTTTTGGATTTGGGAAAGAGGGCAGAT
AACCTTTCTCAAGGGCTAGATCATCTTACAAAGGCAGTGGATGGCTTTTTCAAAATAGTT
TTGAGTGGGCGTGATGCTTTGCTTTGTAATCTAAGAGCAACTGGTACTGCCCCTGACATA
CTAGTAGGGAGGAATGCAGAACCTGTCAGGAGGTGA

Peptide Sequence

PEP ID

orange1.1t00404.2
PEP Infomation
Sequence

MSRPQDPHRPFFPFGNPFRMMSPKGSRLSPKLVSLLADFEETLAERLRKLMPKDKDDILN
LSWMRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDISVNLLDICIAFSSVLTK
VSQGHLLLQCVLHTLDSSSPTQFGRACSSLDNWREHISSKNPRVESCRSILDNLVASLDL
PKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFSALQ
ANVNAEVRNILSSGRATVLNELEAVDGSVKKLYEVIQNEVDTVEEELLQKSVLDLGKRAD
NLSQGLDHLTKAVDGFFKIVLSGRDALLCNLRATGTAPDILVGRNAEPVRR*

Transcript Sequence

Transcript ID

orange1.1t00404.2
Transcript Infomation

gene=orange1.1t00404 CDS=226-1281
Sequence

TTTAAGTAAAAAGTATCCGTTGTGCTAATCACCATTCGTAGAACTCCACGTGTCCATCTG
TCACGAAATTTTCCAGAACCGCAAGTGACTCCATCCCGCGCCCTACACCTTCAATATCAA
AATAAAACAACCCCTCACCTAAAAAAGCGAGGACGCAATAGTGTCTCTAACGCGTCTGCG
AAATTTCCTAAGATTTTCGAGTACTGATTTCGCAAATCCATCAAAATGAGTCGCCCCCAG
GATCCACACCGTCCTTTCTTCCCATTTGGAAATCCTTTTCGGATGATGTCCCCCAAAGGT
TCTCGTTTGTCTCCCAAGCTTGTATCTCTGTTGGCTGATTTTGAGGAGACCTTGGCAGAG
AGGCTGAGAAAACTTATGCCGAAAGACAAGGATGATATCCTCAACTTATCATGGATGAGA
CTGGCAATGGAGTCACTTTGTGAGACTCACAATGTCATAAAAGACCTTATAACTGAGTTG
GAGCTTCCTGTAAGTGACTGGGATGAGAAATGGATAGACGTGTACTTAGACATCAGTGTA
AACTTGCTTGATATATGCATTGCTTTTAGCTCTGTTCTCACGAAGGTCAGCCAAGGCCAC
CTATTGCTTCAGTGTGTCTTGCACACTTTGGATTCTTCCTCTCCAACACAGTTTGGGCGA
GCCTGTTCTTCTCTTGATAACTGGAGGGAGCACATTAGTTCAAAGAACCCCAGAGTTGAG
AGCTGTCGTTCAATCTTAGACAATCTGGTAGCTTCTTTGGATTTGCCCAAGGTTAAGAAC
TCAGCCAAAGGGAAGGTTTTGATGCGCGCAATGTATGGGGTTAAGGTGTTGACTGTATTT
GTTTGTAGTATTTTTGCTGCAGCCTTCTCTGGATCAGCCAAGAATTTGTTAGAACTGAAC
GTTTCTGACACATTACCTTGGGCACCAGCATTTTCTGCCTTGCAAGCTAATGTGAATGCA
GAAGTTAGGAACATATTATCCTCTGGAAGAGCTACAGTTTTGAACGAACTAGAGGCTGTT
GATGGGAGCGTTAAGAAATTGTATGAGGTGATTCAAAATGAGGTTGACACTGTTGAAGAG
GAACTGCTCCAGAAATCTGTTTTGGATTTGGGAAAGAGGGCAGATAACCTTTCTCAAGGG
CTAGATCATCTTACAAAGGCAGTGGATGGCTTTTTCAAAATAGTTTTGAGTGGGCGTGAT
GCTTTGCTTTGTAATCTAAGAGCAACTGGTACTGCCCCTGACATACTAGTAGGGAGGAAT
GCAGAACCTGTCAGGAGGTGAATATTGATGAATGAACTAAAATTTACTGTATACAAGTGG
TGTACGTATGGGGTTTTCTGTTCTCTGATTGATAGAAATATACCAACTAGTATTCTGTGT
GGTCTGAGTCGTAAGGTGTGTCGTACTACTATTTCTCCTGTCTGTAAATGTACTTTGTGC
TGTTTAATGCCAAGATTATATCACTGGAATTGTACTGTTTGCATAAGTGTTCGTGTTGTC
ATATCAAGCAGCATTAACTTACAAGATGTGATGATGTGATTCCGACATCTGCAAGAGTGT
ATGTATTATACACCTGCTTACCGGTAATTCTTTCTGGTTCTTTTCTGGCACTCAACTCAA
ATTTTGATGAACTAATATACCTATCATTTGAATGTGCTTTGCACTGTGGCTAATCATGCT
CTCTCTCTGTCTCATTGGGTGTCATGGCAAAGGAATTTCCTTCTCGGTTTGCAGTACTCC
GAGGGGAAGTTTCTCTCTTCGTGGTCTGTTCACATATTGAGTGAGTAGCATCACATTCTT
GACTTCCTCCATTGGAAGCTAACATGATGAGGTTGATTCTCTTCATGTTATTGATGTTTT
AATGGCTTTGAGAGAAAGTAAGCCACATAGTGGCTTGTTATGCAATGGTTTCGTAAGTTA
GCTCTCTTTGAAACTTATTGCAAATTGCTGTGG