Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00383.1
CDS Infomation

gene=orange1.1t00383
Sequence

ATGGCGGATTTGTACGCCTTGGACTTCGACGGAGTTCTCTGTGACAGCTGTGGGGAGAGC
TCTCTCTCCGCCGTCAAGGCTGCGAAAGTGAGATGGCCAGGTTTATTTGACGGCGTCGAT
TCCGTCATCGAGGATTGGATTGTTGATCAAATGCATATACTGCGACCTGTGGTGGAAACA
GGATATGAAAATCTGTTACTGGTGAGGTTGCTGCTTGAGATAAGAATGCCTTCTATTCGG
AAATCCTCGGTTTCGGAGGGACTCACGGTGGAAGGGATACTGGAGAACTGGTCTAAGATA
AAACCTGTGATTATGGAAGATTGGAGCGAGAATAGAGATGCTCTTGTTGATCTTTTCGGC
AAGGTCAGAGATGAATGGATGGATAAGGACTTGACTACTTGGATTGGTGCTAATAGATTC
TATCCAGGCATCCCTGATGCTCTAAAATTTGCAAGCTCAAGGATTTATATTGTCACCACA
AAGCAGAGCCGTTTCGCAGATGCTTTACTACGAGAGCTTGCAGGAGTTACAATACCACCT
GACAGAATTTATGGTCTGGGAACTGGTCCAAAGGTGGAAGTGTTGAAGCAACTCCAGAAG
AAACCAGAACTCCAGGGGATGACATTGCACTTTGTGGAAGATCGACTTGCAACTCTTAAG
AATGTGATTAAAGAGCCTGAGCTAGATGGGTGGAATTTGTACCTAGGTGACTGGGGATAC
AACACTCAGAAAGAGAGGGAAGAAGCAGCAAGCATTCCTAGGATTCAGCTCCTTCAACTC
TCAGACTTCAGTAGAAAGCTGAAATGA

Peptide Sequence

PEP ID

orange1.1t00383.1
PEP Infomation
Sequence

MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET
GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG
KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP
DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY
NTQKEREEAASIPRIQLLQLSDFSRKLK*

Transcript Sequence

Transcript ID

orange1.1t00383.1
Transcript Infomation

gene=orange1.1t00383 CDS=171-977
Sequence

ATTAAAATTTACAGAAAAAACAAAAAAAAAGGATCGTCGTTCAAAATGGGAAAACGGGAA
AACGTGTCGCTCCATCATTGGAGTTTGGTGAGTAAGCCAATCCGCACCCCACCGGTATAA
TGGGAGTCGGCAAGAGTAAAAGCAAAAACAAGGTTGGGTGTCGCGACTAGATGGCGGATT
TGTACGCCTTGGACTTCGACGGAGTTCTCTGTGACAGCTGTGGGGAGAGCTCTCTCTCCG
CCGTCAAGGCTGCGAAAGTGAGATGGCCAGGTTTATTTGACGGCGTCGATTCCGTCATCG
AGGATTGGATTGTTGATCAAATGCATATACTGCGACCTGTGGTGGAAACAGGATATGAAA
ATCTGTTACTGGTGAGGTTGCTGCTTGAGATAAGAATGCCTTCTATTCGGAAATCCTCGG
TTTCGGAGGGACTCACGGTGGAAGGGATACTGGAGAACTGGTCTAAGATAAAACCTGTGA
TTATGGAAGATTGGAGCGAGAATAGAGATGCTCTTGTTGATCTTTTCGGCAAGGTCAGAG
ATGAATGGATGGATAAGGACTTGACTACTTGGATTGGTGCTAATAGATTCTATCCAGGCA
TCCCTGATGCTCTAAAATTTGCAAGCTCAAGGATTTATATTGTCACCACAAAGCAGAGCC
GTTTCGCAGATGCTTTACTACGAGAGCTTGCAGGAGTTACAATACCACCTGACAGAATTT
ATGGTCTGGGAACTGGTCCAAAGGTGGAAGTGTTGAAGCAACTCCAGAAGAAACCAGAAC
TCCAGGGGATGACATTGCACTTTGTGGAAGATCGACTTGCAACTCTTAAGAATGTGATTA
AAGAGCCTGAGCTAGATGGGTGGAATTTGTACCTAGGTGACTGGGGATACAACACTCAGA
AAGAGAGGGAAGAAGCAGCAAGCATTCCTAGGATTCAGCTCCTTCAACTCTCAGACTTCA
GTAGAAAGCTGAAATGATTGTCGGGTGCAATATTTATTCATAGATTACCCCAATTCTTAC
TTGAATAGATGCAAACAGTGTCCTTTCGCCGTCCAAGTCAATTATTGAGATGAGAATTAC
TCGAGTATCTGCTAACTGCTAATGAAGGAACTGGAGTGTTTCTCATGTTGTCATTGGTAT
TGCATACACATAGAATAAGATGAAGATTCTGCATGTTTAAAATTCTTTTTCTTCAAATCA
AGAAGTTCCAATTTCAGTAAATTGCATTGAATATATTTGTAATCCAGTGTGCATCATTCA
GAAAGTTACAAACTATCTGCTCAGGCAGACGGGCACAAATATTAAAGGAATGGGATGAGG
AATGAGGATGAGTGCGGGTACCTAACGAAAGTTGAAAGTGGTGAAAAGCAAATCTTAGAA
ATGAATTCCTAGTGTTGTTAATCTGAATCTAATTTTGTAAATCTTGTCAGCTAGAGCTCT
TCCTTGGCGCGTCCATCATCAGCATCATCTTTGTTATTTTCATTTTGTAGCTTCTGAATA
ACTTTTTCAAGAGGAGGATCTCCTGGTCGTCGATAAGCTTGGTCCCCTATCTTAACCTCA
TAGGCCTCCGGTTGGTTCAATAAAAACTCCCTCAACTGGGTTGGAAGAACAATTTCCCAA
AAGAAAATGAATCAGAATCCAAAAGACGAACAATGTGGAGAATTATCAAAAGTTAATTTA
TTAGCCAA