Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00381.1
CDS Infomation

gene=orange1.1t00381
Sequence

ATGGCGGATAATGAGGTAGAAGAGAATGCTTCCCGTGGGAATGAATGGGAGGTTGTGTCA
CTTACAGCATCTACCTATGCTGCTGCTCCTAGTGCTCAAAATGATGAACCGAAGGATGAT
GCCAGGGGTGACACTGCTGAAGAAATTGAAGCGGAAACTTCTCATGCATTATTCATGTCT
CGTCACTTTGTTTTTCCCCCCGGTGAGCATGAGAATTTGCCGGTGGAACCTGAACTTGTA
AAGAGTGAGATTTATAATGAATCTGAAGGGAAGGACGTTGTCTCTGAATTGGGTGCTGAA
GTCGGAGACAAATCTAGTGGAAAGGATGATGAAGATAATTGGACCCTTAAGGATTTGAGT
GTACACAATGAGTTTCCAGAAATGCAGATTTTTGATGAGAGGGGTAACAGGCTATCCTTT
AGTAGTACAGAGTTTGAAGAAGGTACACCATTACCGGGGTTAAATTTGACTAGGAAGGAA
GAGAGTATTTACAGTGCGGCTACGTTTAGTTCTTTCCACGGTGACGCGGCACTCAATGAG
AACTTGGAGACTCCTGAGCTAACTGAACCTTCTGAGCAAGGTTTAAATGTTCCTGCAGAC
GCATCAAAATCTCTGATGCCTGCAAAAGAAGATGACAAATTTGCTGAGTCTGACCTTCCC
TGTGAAGCATGGTGGAAGAGAAGGGCAGCTTCCTTGTATGCTCATGCAAAGGAGACAAAT
ACATTTTGGTCCATTTTCATTGCAGCGGCTGTGATGGGCATTGTAATTATTGGGCAGCAG
TGGCAACAAGAAAGGTGGCAAGCTTTGCAGCTGAAGTGGCAGCTCAGCATCAATGATGAG
AAAGGGAGCAGGTTGTTGGGTCCCATATCTCGTCTTAAAGATGCAATTGTAGGTGGCCAC
CGTCGAGGTTCTCTTGTCAGGGGAAGCTCCTCAAATGATAGTTAA

Peptide Sequence

PEP ID

orange1.1t00381.1
PEP Infomation
Sequence

MADNEVEENASRGNEWEVVSLTASTYAAAPSAQNDEPKDDARGDTAEEIEAETSHALFMS
RHFVFPPGEHENLPVEPELVKSEIYNESEGKDVVSELGAEVGDKSSGKDDEDNWTLKDLS
VHNEFPEMQIFDERGNRLSFSSTEFEEGTPLPGLNLTRKEESIYSAATFSSFHGDAALNE
NLETPELTEPSEQGLNVPADASKSLMPAKEDDKFAESDLPCEAWWKRRAASLYAHAKETN
TFWSIFIAAAVMGIVIIGQQWQQERWQALQLKWQLSINDEKGSRLLGPISRLKDAIVGGH
RRGSLVRGSSSNDS*

Transcript Sequence

Transcript ID

orange1.1t00381.1
Transcript Infomation

gene=orange1.1t00381 CDS=346-1290
Sequence

CTCGCACGCAAACGCACGAACCTTACCTTAATTACCGGTTAACGACCGGTAGCCACAGTG
ACTAACAATAAAGATATTATTATTATTATCTCAATACACGACGTGCTTTACCTACAACAG
CCAGTAACTCCGATCAAATATACCGGTACCATCGGTTCTCTTCTTTTATCTCGAATTCGA
GAAACCTTAACTATAGTCTATAAAGCCTTGTTCCGCTCTACGCCTGTCGAGGCAGTTAGT
GTTGCTCAATCTAATCAGAAACGCCGCCGTATCGATCACCAGTCTATCTTTCCGCCTTAG
ATCTTGTTCCTCCGATTGCGTCTCTGAAACTTGTCATTGGGAAGGATGGCGGATAATGAG
GTAGAAGAGAATGCTTCCCGTGGGAATGAATGGGAGGTTGTGTCACTTACAGCATCTACC
TATGCTGCTGCTCCTAGTGCTCAAAATGATGAACCGAAGGATGATGCCAGGGGTGACACT
GCTGAAGAAATTGAAGCGGAAACTTCTCATGCATTATTCATGTCTCGTCACTTTGTTTTT
CCCCCCGGTGAGCATGAGAATTTGCCGGTGGAACCTGAACTTGTAAAGAGTGAGATTTAT
AATGAATCTGAAGGGAAGGACGTTGTCTCTGAATTGGGTGCTGAAGTCGGAGACAAATCT
AGTGGAAAGGATGATGAAGATAATTGGACCCTTAAGGATTTGAGTGTACACAATGAGTTT
CCAGAAATGCAGATTTTTGATGAGAGGGGTAACAGGCTATCCTTTAGTAGTACAGAGTTT
GAAGAAGGTACACCATTACCGGGGTTAAATTTGACTAGGAAGGAAGAGAGTATTTACAGT
GCGGCTACGTTTAGTTCTTTCCACGGTGACGCGGCACTCAATGAGAACTTGGAGACTCCT
GAGCTAACTGAACCTTCTGAGCAAGGTTTAAATGTTCCTGCAGACGCATCAAAATCTCTG
ATGCCTGCAAAAGAAGATGACAAATTTGCTGAGTCTGACCTTCCCTGTGAAGCATGGTGG
AAGAGAAGGGCAGCTTCCTTGTATGCTCATGCAAAGGAGACAAATACATTTTGGTCCATT
TTCATTGCAGCGGCTGTGATGGGCATTGTAATTATTGGGCAGCAGTGGCAACAAGAAAGG
TGGCAAGCTTTGCAGCTGAAGTGGCAGCTCAGCATCAATGATGAGAAAGGGAGCAGGTTG
TTGGGTCCCATATCTCGTCTTAAAGATGCAATTGTAGGTGGCCACCGTCGAGGTTCTCTT
GTCAGGGGAAGCTCCTCAAATGATAGTTAAGATGATGATGATGAAGAAAAAAGTTGAGAG
AGAAAGGAGAGATTGGTGTGAGGGTGTTAATATGCTCGTTTGCTTTGTGAAGCTCCTGTT
TTCTGGTGTCCTAGCTACATAGCGACATGTTATAATTTTGATATTGTTGTGCCTTATTAT
TTTTTGCAAATGAATTATGTGATCCTGCCATGCTGTAGCTACCTGAGTTGTAGGGCCGGT
TGTCTAGATAGAATTTGTATACCCGGATCATGAAAGTCCCGACTGGGTGTTATAATCAAA
TCTATTTGCTGGTTCAGCTGGTGTCGGTGGTTCTCGAATTAGAATTGTGTCTCGAATTAA
AATTTGAGAAATAATCAACAAGATGTGGGAATCTAAACATTGTCGACTGATGGTTTGTAC
TAAAATGGTGCAACCCAAAAAAGCTTGACGATTGCTCAGCAGTGTATTCGTTTGGGATGA
ATTTGGATATCTGATCTT