Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00358.2
CDS Infomation

gene=orange1.1t00358
Sequence

ATGGACCCTGACGAAGTGATCGAGTTCTTGAGCTGTGTTCCGTTGCTACAGAGACTACCG
GGTTCTTCTCTGAAGAGAATTGCTGATATTGTTATTGTTAAACGCTATGGGAAAGGAGAG
TATGTTGTTCGAGATGGGGATATTGGGGAGGGAATTTATTTCATATGGGAAGGAGAGGCT
GAAGTCTCTGTGTCAGACTCAGTTCAGGCTGAGGAAGAAGATCGTCCTGAATTTCAGTTA
AAACGATATGATTACTTTGGACATGGGTCGCCCACAATCTTCCGGCAGGGAGATGTAATT
GCTTTGACAGAGCTGACCTGCTTAGTGCTGCCGCATGAACATTGCAATTGGCTTGAAACA
AAATCAATCTGGAGTGCAGATAAGACAGTTGGGACATGCTCACTTGTGGAGAATATATTG
CATTTAGAGCCTGTAGAGGTGAATATATTTCAAGGGATCACATTGCCAGATGCTCCAAAA
TTTGGAAAGGTCTTCGGAGGACAGTTAGTTGGGCAGGCGCTGGCTGCAGCATCAAAGACT
GTTGATTGTCTTAAAATTGTCCATAGTTTGCACTGCTACTTTCTTCTGGTTGGGGATTTA
AACATTCCAATTATATACCAAGTTCACCGTGTACGTGACGGCAATAGCTTTGCAACCCGA
AGAGTTGATGCAATACAAAAAGGAAACATCATATTCACTTTGCTCGCTTCATTTCAAAAA
GAAGAGCAGGGATTTGAACACCAGGAGACGACTATGCCACTAGTGCCAGCTCCAGAAATG
CTTCTGTCAATGGAAGAGCTACGCGAGAGACGTCTCACAGATCCTCGCCTTCCTAGGAGC
TATCGAAACAAGGTTGCCTCAAAAGAATTTGTCCCGTGGCCCATAGATATAAGGTTTTGC
GAGCCGAACAGTTATACTAATCAGAGTAAATCTCCACCAAGCTTGAGGTACTGGTTCAGA
GCCAAAGGGAAACTTTCAGACGACCAGGCTCTGCATAGGTAA

Peptide Sequence

PEP ID

orange1.1t00358.2
PEP Infomation
Sequence

MDPDEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEA
EVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPHEHCNWLET
KSIWSADKTVGTCSLVENILHLEPVEVNIFQGITLPDAPKFGKVFGGQLVGQALAAASKT
VDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQK
EEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVPWPIDIRFC
EPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHR*

Transcript Sequence

Transcript ID

orange1.1t00358.2
Transcript Infomation

gene=orange1.1t00358 CDS=322-1323
Sequence

CGCAAATCGCACAAATGTTTGATGGGCACGCGCTCCGCCTGCCATCAACGTGGAGTCAAC
TAAAACGTGCGGCAAAAAAGGTCGCTGAAGAGTTACAGTCTAGTGTCGAAGACTAATTGG
TTACGAGCTTTATTAGGATCATCTCGTCTCCGGGCAAGAAACAGAAACTGATACGAAAAG
TCATCAAATCTGCTAATTCCAGCTCCCTCCTCTGCCACCTCAAAGATCAACGCAAAAAAG
CTTACCAAAAAAAAAAAAAAATACTATTAAATTAATTAAATTTATAAAGTTTTTTCCTCT
TCGGTTGCGAGCCGAGCCATCATGGACCCTGACGAAGTGATCGAGTTCTTGAGCTGTGTT
CCGTTGCTACAGAGACTACCGGGTTCTTCTCTGAAGAGAATTGCTGATATTGTTATTGTT
AAACGCTATGGGAAAGGAGAGTATGTTGTTCGAGATGGGGATATTGGGGAGGGAATTTAT
TTCATATGGGAAGGAGAGGCTGAAGTCTCTGTGTCAGACTCAGTTCAGGCTGAGGAAGAA
GATCGTCCTGAATTTCAGTTAAAACGATATGATTACTTTGGACATGGGTCGCCCACAATC
TTCCGGCAGGGAGATGTAATTGCTTTGACAGAGCTGACCTGCTTAGTGCTGCCGCATGAA
CATTGCAATTGGCTTGAAACAAAATCAATCTGGAGTGCAGATAAGACAGTTGGGACATGC
TCACTTGTGGAGAATATATTGCATTTAGAGCCTGTAGAGGTGAATATATTTCAAGGGATC
ACATTGCCAGATGCTCCAAAATTTGGAAAGGTCTTCGGAGGACAGTTAGTTGGGCAGGCG
CTGGCTGCAGCATCAAAGACTGTTGATTGTCTTAAAATTGTCCATAGTTTGCACTGCTAC
TTTCTTCTGGTTGGGGATTTAAACATTCCAATTATATACCAAGTTCACCGTGTACGTGAC
GGCAATAGCTTTGCAACCCGAAGAGTTGATGCAATACAAAAAGGAAACATCATATTCACT
TTGCTCGCTTCATTTCAAAAAGAAGAGCAGGGATTTGAACACCAGGAGACGACTATGCCA
CTAGTGCCAGCTCCAGAAATGCTTCTGTCAATGGAAGAGCTACGCGAGAGACGTCTCACA
GATCCTCGCCTTCCTAGGAGCTATCGAAACAAGGTTGCCTCAAAAGAATTTGTCCCGTGG
CCCATAGATATAAGGTTTTGCGAGCCGAACAGTTATACTAATCAGAGTAAATCTCCACCA
AGCTTGAGGTACTGGTTCAGAGCCAAAGGGAAACTTTCAGACGACCAGGCTCTGCATAGG
TAAGTTGCCCCTTTTGGATGCTGACATTTATTTTTTA