Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00354.1
CDS Infomation

gene=orange1.1t00354
Sequence

ATGCACACTCATCGACTTTCAACACCAAATCATAATCTTCACCAACTCGGTCTTTCACCT
TGTCGTATATTTTATCCCACTTCATCACCAACACTTGCATTCAATCAAAATTCAACATTT
GGGTTTTGCAATTCACTCAAAAGGCTAGCCAAATCATTAACTAGCACGAGAAAATGTAGG
GGTGGATATAGGATCAGGTGCGGACAGGTACAAAATAATGATAAAGATGACGGGTTTTAT
ATGAGGAGGTGTGTGGAGCTTGCTACAAAGGCAGTTGGCTCTACAAGTCCCAACCCAATG
GTGGGTTGTGTGATTGTGAAAGATGGCAAGATTGTTGGTGAAGGGTTTCACCCTAAAGCA
GGCCAGCCTCACGCTGAGGTATTTGCTCTGAGAGATGCTGGGGAGTTGGCCGAGGGTGCA
ACAGCTTATGTGAGCTTGGAACCTTGTAATCATTATGGGAGAACTCCACCATGTACTGAA
GCTCTGATTAAAGCTAAAGTGAAAAAGGTGGTGGTCGGGATGTTAGACCCAAACCCAATT
GTGAATTCAAAGGGATTGGAAAGACTGAGAGATGCTGGAATTGATGTGACTGTGGGTGTA
GAGGATGAGTTGTGCAAGAGGCTCAATGAGGCATTTATCCATCGAATAGTCACAGGGAAG
CCTTTTGCTACACTTAGATACACGCTCTCTGTCAATGGCCACGTCCTAGACCAACTCGGA
GAAGGAGTTGCAGAATCTGGTGGATATTACTCGCAGTTGTTACAGGAATATGATGCAATT
ATACTTTCCGCATCATCAACTAAGAAGTATTCAATACCTGCATCACAAGAACCTGATGCT
AATCAGCCCTTTCGGATTATAACAGTAAGTAATCATGCTTCTCCAATCCGAATTCCTGGT
CTTTCTGAAGAATCTTCTTCAAAAGTGATAGTATTTACAGATGGAGAGATAACTGTAGAA
CCTGATATGGGTACAAAAGGAATTGAAACAGTAAATTTGCATCAGTTGAATTTAAAAGCT
GTTTTGGACTACTGCTATTCCCACGGATTTTGCAGTGTTTTGGTGGATTTGAGGGGTAAT
TATGGTGATCTTGAAATGCTTCTCAAAGAGGGTATCGAACAAAATCTGTTGCAAAAGATA
GTGGTGGAAGTTTTGCCGGTATGGAATGGAAGTGATGGCGGCAATCCACACACCCTATTG
AATAGTTTAGGGAAAAGACTGATATTGAAGAATTTACAGCCTAAGATGTCAAGCCAGAGC
ATTGTGCTCGAGGGGTACCTATGA

Peptide Sequence

PEP ID

orange1.1t00354.1
PEP Infomation
Sequence

MHTHRLSTPNHNLHQLGLSPCRIFYPTSSPTLAFNQNSTFGFCNSLKRLAKSLTSTRKCR
GGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKA
GQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPI
VNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLG
EGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPG
LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN
YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQS
IVLEGYL*

Transcript Sequence

Transcript ID

orange1.1t00354.1
Transcript Infomation

gene=orange1.1t00354 CDS=165-1448
Sequence

CGAACCCGGGCTCAGACATCATTTTTTTTGAGTCCTCCATCTCCAAACCCCCGTTTTCAT
GCGGTAGGTGGGAATTGATGCGGATACAGTACTGTATCGATTTTCGTTTTTTCCGTCTCT
TCATCTCCAAACCACCGCTGTGAACAATTGAATATCCCACGAAAATGCACACTCATCGAC
TTTCAACACCAAATCATAATCTTCACCAACTCGGTCTTTCACCTTGTCGTATATTTTATC
CCACTTCATCACCAACACTTGCATTCAATCAAAATTCAACATTTGGGTTTTGCAATTCAC
TCAAAAGGCTAGCCAAATCATTAACTAGCACGAGAAAATGTAGGGGTGGATATAGGATCA
GGTGCGGACAGGTACAAAATAATGATAAAGATGACGGGTTTTATATGAGGAGGTGTGTGG
AGCTTGCTACAAAGGCAGTTGGCTCTACAAGTCCCAACCCAATGGTGGGTTGTGTGATTG
TGAAAGATGGCAAGATTGTTGGTGAAGGGTTTCACCCTAAAGCAGGCCAGCCTCACGCTG
AGGTATTTGCTCTGAGAGATGCTGGGGAGTTGGCCGAGGGTGCAACAGCTTATGTGAGCT
TGGAACCTTGTAATCATTATGGGAGAACTCCACCATGTACTGAAGCTCTGATTAAAGCTA
AAGTGAAAAAGGTGGTGGTCGGGATGTTAGACCCAAACCCAATTGTGAATTCAAAGGGAT
TGGAAAGACTGAGAGATGCTGGAATTGATGTGACTGTGGGTGTAGAGGATGAGTTGTGCA
AGAGGCTCAATGAGGCATTTATCCATCGAATAGTCACAGGGAAGCCTTTTGCTACACTTA
GATACACGCTCTCTGTCAATGGCCACGTCCTAGACCAACTCGGAGAAGGAGTTGCAGAAT
CTGGTGGATATTACTCGCAGTTGTTACAGGAATATGATGCAATTATACTTTCCGCATCAT
CAACTAAGAAGTATTCAATACCTGCATCACAAGAACCTGATGCTAATCAGCCCTTTCGGA
TTATAACAGTAAGTAATCATGCTTCTCCAATCCGAATTCCTGGTCTTTCTGAAGAATCTT
CTTCAAAAGTGATAGTATTTACAGATGGAGAGATAACTGTAGAACCTGATATGGGTACAA
AAGGAATTGAAACAGTAAATTTGCATCAGTTGAATTTAAAAGCTGTTTTGGACTACTGCT
ATTCCCACGGATTTTGCAGTGTTTTGGTGGATTTGAGGGGTAATTATGGTGATCTTGAAA
TGCTTCTCAAAGAGGGTATCGAACAAAATCTGTTGCAAAAGATAGTGGTGGAAGTTTTGC
CGGTATGGAATGGAAGTGATGGCGGCAATCCACACACCCTATTGAATAGTTTAGGGAAAA
GACTGATATTGAAGAATTTACAGCCTAAGATGTCAAGCCAGAGCATTGTGCTCGAGGGGT
ACCTATGATGTGTGTGGTTGGAGGCCATGGATGGATACAGAATTCATTCTCTCTAACTTA
ATATTGATGGGCGCCATTATGGCAATCTTAGCAGGGAGTCCTTCATTTCACTAGTAGGCA
AGTAGCCGTTTCCTTTTCTTCCTTTCTTTCTTTCTTTATTCCTTCGTCTTCTTCAACCAC
CACACACACCCCCCACACCACCACCCCCCTCTCTCTTTTTGAAAGGAAGTATCTGCTTCC
TTTTGTGAAGAAAAGGGCTGCATAGCCCTTGACCCAATAGTTTGCTTTCGGCGATCATTT
CCTTCATGGCCCCATAAAAATGTTCTTTCAGCAGAAGCTTTTTGAATCTTGAAGCGGCAT
TCCTCATGCCGTGAGGACATTATTGAATGTAATTTGACCTTCGCTATTATTTTTGTGATA
GAAAAATTGTGTCGAGGCACATTCAGATTTGAGTTCCATTAAGTAGTTTTTTTTTTTAAT
AAACATATACAGAAATACT