Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t00353.3
CDS Infomation	gene=orange1.1t00353
Sequence	ATGAAACAAGCCACATTCCGCTCAAAAATCTTACCTCCTTCCCATTTTATCCCCAAAACC CTCCTCAAATTACAACCTTCAATCACCACCCTTACCTTTCCCTCCAAATCCCCAAACCCC CTTACTTTCAAAACCCTCTCTTGCTTAGAGTCGCAGTCTCAATCAGAAACCAAAACCCTA ACCCTGATTTCAGTCCTGCGGGCGATCCCAGACTGGGCGGACCGCGTGAAAGAGCGTGGG GTGAAACAAAAACGTACCTTATACAGCCATGAGAAGTGGGTCGAACACAGAAGCTCATTG CGTCACGTGCGGCACTTGCTTTCAAGCTTATCTTCCCGCGTGATACTTTCACTGATCCCG CCTGTGATTGCGTTTACTATGGTGGCTGTGGTGATTGCGAGTTACAATTCTGCTTTGGAC TCCCATTTGTTGCCTGGGTTTTTGCCCGTTCTGAGAGCTTCTTCACTGCCGTATCAATTG ACGGCTCCTGCGTTGGCTCTGCTTTTGGTGTTTAGAACTGAGGCTTCGTATTCAAGGTTC GTAGACGGAAAAAAGGCCTGGACTCAAATCATTGCTGGAACTAATGATTTTGCTACGATG GTCATTTCGGGAACTGACAACTCCACTGACGAGTGCATCAAAGATTCTCTTCTGCGCTAC ATTATGGCTTTTCCGGTTGCTCTCAAGGGTCATGTGATTTGTGACTCAGATGTTAGCGGA GATCTCCAAGATCTGCTTGATGCAGATGATCTAGCAATAGTACTCGATTCAAAGCATCGA CCACGCTGCATTATCGAGTTCATTTCTCAAAGCCTTCAATTACTAAACTTAGAGGCGACA AAGCAAAATATGTTGGAGTCAAAGATCTCCTGTTTTCACGAAGGCATTGGTGTATGTGAG CAACTCATGGGTATCCCTATTCCTCTCTCGTACACTCGCTTGACATCAAGATTTCTAGTC CTCTGGCATCTCACCCTCCCAATCATACTTTGGGATGATTGCCACTGGATAGTAGTTCCT GCTACTTTTATCAGTGCTGCTTCTTTGTTCTGCATTGAAGAAGTAAGCCTCTCTTACCTC TTTGCTAGTTGGTGA

Peptide Sequence

PEP ID	orange1.1t00353.3
PEP Infomation
Sequence	MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTL TLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIP PVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRF VDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSG DLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCE QLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVSLSYL FASW*

Transcript Sequence

Transcript ID	orange1.1t00353.3
Transcript Infomation	gene=orange1.1t00353 CDS=160-1254
Sequence	CTGGGACAACCGTTTTTTGAACAACCCAATGGCCGTGACCGTCCATCATCCACTCTCACT CCTCACCAACTGAAGTTGTTGTTCAAACTTAGAACATGCTCTCTGGTCTGTTTCATCATC TCTCCTTCTTCAAAGTTCAAACCCTAATCTTTATCACAAATGAAACAAGCCACATTCCGC TCAAAAATCTTACCTCCTTCCCATTTTATCCCCAAAACCCTCCTCAAATTACAACCTTCA ATCACCACCCTTACCTTTCCCTCCAAATCCCCAAACCCCCTTACTTTCAAAACCCTCTCT TGCTTAGAGTCGCAGTCTCAATCAGAAACCAAAACCCTAACCCTGATTTCAGTCCTGCGG GCGATCCCAGACTGGGCGGACCGCGTGAAAGAGCGTGGGGTGAAACAAAAACGTACCTTA TACAGCCATGAGAAGTGGGTCGAACACAGAAGCTCATTGCGTCACGTGCGGCACTTGCTT TCAAGCTTATCTTCCCGCGTGATACTTTCACTGATCCCGCCTGTGATTGCGTTTACTATG GTGGCTGTGGTGATTGCGAGTTACAATTCTGCTTTGGACTCCCATTTGTTGCCTGGGTTT TTGCCCGTTCTGAGAGCTTCTTCACTGCCGTATCAATTGACGGCTCCTGCGTTGGCTCTG CTTTTGGTGTTTAGAACTGAGGCTTCGTATTCAAGGTTCGTAGACGGAAAAAAGGCCTGG ACTCAAATCATTGCTGGAACTAATGATTTTGCTACGATGGTCATTTCGGGAACTGACAAC TCCACTGACGAGTGCATCAAAGATTCTCTTCTGCGCTACATTATGGCTTTTCCGGTTGCT CTCAAGGGTCATGTGATTTGTGACTCAGATGTTAGCGGAGATCTCCAAGATCTGCTTGAT GCAGATGATCTAGCAATAGTACTCGATTCAAAGCATCGACCACGCTGCATTATCGAGTTC ATTTCTCAAAGCCTTCAATTACTAAACTTAGAGGCGACAAAGCAAAATATGTTGGAGTCA AAGATCTCCTGTTTTCACGAAGGCATTGGTGTATGTGAGCAACTCATGGGTATCCCTATT CCTCTCTCGTACACTCGCTTGACATCAAGATTTCTAGTCCTCTGGCATCTCACCCTCCCA ATCATACTTTGGGATGATTGCCACTGGATAGTAGTTCCTGCTACTTTTATCAGTGCTGCT TCTTTGTTCTGCATTGAAGAAGTAAGCCTCTCTTACCTCTTTGCTAGTTGGTGAAAATTT TAAGTTGATCTCAAATAACTTATGAGTAGTGGTAGACTTCCCAAAATTTCCTCCCACTTG ATGTGTCATTCATCAAGTGATTGATAGATTTTAACGTTCCAAGTAAATTAATTATATTAT CATGCCACCCACTTGCTGAATGCCGTATCACGTGGGAGGAAATTTTGAGATGTCTAACAC TACTTACATCAAGTGCAGCTTGCAGCATTATGTAGGACAGTTTTACCTAATCTGCCATCA GTGATGCACTTGTTCAAATTCTGTTTATTATGCACATTGAACATGGATGCTAACTTGACA GTTTGTTTTGCGAGGTTGGTGTCCTTATTGAGGAACCATTTCCGATGTTAGCTCTGGATG AGCTTTGCAATCTTGTTCAGAGCAACATTCAGGAAGCAATTGCTACTCAGAAAGTTATCC AAGCTCAGGTATCTGCAAAAAGAAAGAGCCATTCCTATCAGCACTGCGCAAATGGTTGGC CTAACTCTTAAAAGTGGACAGGAAAGTCCGTGTAGTATAGTTTCACGGGACTACAGAATA ACTACTCAAATACTTATCCCATTCAGTGGAGCTTGCATTCCCTCCCTTCTGTATCACAAT GACACACTAAAGCTCGGCTTAGTATCTTGAATATGTAAATATGATGTGGCATATCTGGGA AACCTCAAATTTTGATGTATTCGTTGTATATATACATACACACATACATACATGCATACA TACATAAGTGTGTGTGTACACGCACACACATAGGCACACCAAATTCAAATCATTGGTAAA AACCTTGGCTGCTTAATTCATATGTTAACAGTTGGTCATTTTCCTGTTTTGGAATGCTAT TTCCAATTTGATGTTGCAGTTTTAATATATTAGGTGTCTTTACAACAATTCTTAGACAAT ATCGTATAAAT