Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00351.5
CDS Infomation

gene=orange1.1t00351
Sequence

ATGGGGATTCAGTGTTCTAAATTCACAGCATGTTGCTGGAACTCACAATTCAAGGCAACA
GTTCTTGAAGCTCCTGATGTCGATGCTGCAGAGAATGATGAAATGAGCGAGGTCGATGGC
TTGCCTTCATTCCGTGAATTCACCTTGGAGCAACTTAAAAATGCCACATCGGGGTTTGCA
GTAGAAAATATTGTGTCTGAGCACGGAGAGAAGGCTCCTAATGTTGTTTATAAAGGGAAG
CTGGAGAATCAGAGGAGGATTGCTGTTAAGCGATTTAACAGAATGGCTTGGCCTGATCCA
CGACAGTTCTTGGAGGAAGCAAGATCAGTTGGTCAACTGCGAAACAATAGATTGACAAAT
TTGCTAGGCTGTTGCTGTGAAGGCGATGAGCGGTTGCTTGTGGCAGAATATATGCCCAAT
GAAACACTTGCCAAACACCTTTTCCATTGGGAAACACATCCTATGAAATGGGCAATGCGA
TTAAGGGTTGTTCTACATCTTGCACAGGCTCTAGAGTACTGCACAAGCAAAGGGCGTGCC
CTTTATCATGACCTCAATGCCTACAGAATTTTATTTGATGAGGATGGTAATCCAAGACTC
TCAACTTTTGGTCTAATGAAGAATAGTAGGGATGGAAAAAGTTATAGCACAAATTTAGCA
TTTACTCCTCCTGAGTATCTGAGGACTGGAAGAGTAACGCCTGAAAGTGTAATATATAGC
TTTGGGACTCTTTTACTGGACCTTCTTAGTGGGAAGCATATTCCCCCAAGCCATGCCCTC
GATCTGATACGGGACAGAAATCTTCAGATGCTGACAGATTCCTGCTTGGAAGGACAATTT
ACTGATGATGATGGGACTGAGTTAGTACGTTTGGCTTCTCGGTGTTTACAATATGAACCC
CGAGAACGCCCAAATCCAAAGTCATTAGTGACTGCTTTAAGTCCTCTTCAGAAAGAAACT
GAGGTTCCTTCTCATGTCTTGATGGGTATTCCACACAGTGCTTCTGTCTCTCCCCTGTCC
CCACTTGGTGAAGCCTGTTCAAGAAGAGATTTGACTGCCATACACGAGATCTTGGAGAAA
ATAAGCTACAAAGATGATGAAGGAGTAGCAAATGAGCTCTCCTTCCAAATGTGGACTGAT
CAAATGCAAGAAACATTAAATTCCAAGAAAAAGGGTGATGTTGCCTTCAGACAGAAAGAT
TTAAAAGATGCAATTGAGTGTTACACACAGTTCATTGATGCTGGAACCATGGTTTCACCG
ACAGTTTACGCACGGCGTAGTTTGTGTTATCTCATGAGTGACATGCCTCAAGACGCTCTG
AATGATGCAATGCAAGCCCAAATCATTTCCCCCATCTGGCACATTGCATCTTATCTTCAG
GCTGCTGCTCTTTCTGCCATGGGAATGGAGAATGAAGCTCAAGTGGCACTCAAGGAGGGC
ACAACTCTTGAAGCAAAGAAGAATTCAACTGCTGGACAAAAGTGA

Peptide Sequence

PEP ID

orange1.1t00351.5
PEP Infomation
Sequence

MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA
VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN
LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA
LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP
RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK
ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP
TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG
TTLEAKKNSTAGQK*

Transcript Sequence

Transcript ID

orange1.1t00351.5
Transcript Infomation

gene=orange1.1t00351 CDS=536-2020
Sequence

AATCCTCGTACGTTTTGTTGTCCAGCTTTTATTAGTTGTTAAATCGAGTTCTGATTTAAT
TTATGAGTATTGCTGCTTATAACCCAGAAATTTGCCCAAATCGTTCATTTTTATTTTCTT
ATTATTTTTCTTTTCTGGATTGTGATTAAATGATCAAGTGACTTCAAAGTGGAGCATTGA
TTTATTAACACCAAGTTTCTCTTCCTAATATGCAAGTTTTTGTTGACTTGAACTCATTCA
ATTTGCCTTAGAAGTTGTGATACTTTGATTGTGTTCTAAACTAAAGTATCCATCTATTTT
TTTTATCTCAGATTCTGCTGTTCTGAGTAAATTTTGTGGATAACTGGGGATTTAATAAGT
TCTCCTGAGCCTTTTAAGTAATTGAGAAGATCAGGATCCCAACTTTCTACTCATTGCACA
ATCAAAGTGAATGAAGCTGAATGAACTGGGGATGCAACTGATCCCAGTTTTGTTTAGAGG
GTTTCTTCTTTGAAGAGGGTTTCTTTGTATTGATGCTTTTATTTCTAATATTTAGATGGG
GATTCAGTGTTCTAAATTCACAGCATGTTGCTGGAACTCACAATTCAAGGCAACAGTTCT
TGAAGCTCCTGATGTCGATGCTGCAGAGAATGATGAAATGAGCGAGGTCGATGGCTTGCC
TTCATTCCGTGAATTCACCTTGGAGCAACTTAAAAATGCCACATCGGGGTTTGCAGTAGA
AAATATTGTGTCTGAGCACGGAGAGAAGGCTCCTAATGTTGTTTATAAAGGGAAGCTGGA
GAATCAGAGGAGGATTGCTGTTAAGCGATTTAACAGAATGGCTTGGCCTGATCCACGACA
GTTCTTGGAGGAAGCAAGATCAGTTGGTCAACTGCGAAACAATAGATTGACAAATTTGCT
AGGCTGTTGCTGTGAAGGCGATGAGCGGTTGCTTGTGGCAGAATATATGCCCAATGAAAC
ACTTGCCAAACACCTTTTCCATTGGGAAACACATCCTATGAAATGGGCAATGCGATTAAG
GGTTGTTCTACATCTTGCACAGGCTCTAGAGTACTGCACAAGCAAAGGGCGTGCCCTTTA
TCATGACCTCAATGCCTACAGAATTTTATTTGATGAGGATGGTAATCCAAGACTCTCAAC
TTTTGGTCTAATGAAGAATAGTAGGGATGGAAAAAGTTATAGCACAAATTTAGCATTTAC
TCCTCCTGAGTATCTGAGGACTGGAAGAGTAACGCCTGAAAGTGTAATATATAGCTTTGG
GACTCTTTTACTGGACCTTCTTAGTGGGAAGCATATTCCCCCAAGCCATGCCCTCGATCT
GATACGGGACAGAAATCTTCAGATGCTGACAGATTCCTGCTTGGAAGGACAATTTACTGA
TGATGATGGGACTGAGTTAGTACGTTTGGCTTCTCGGTGTTTACAATATGAACCCCGAGA
ACGCCCAAATCCAAAGTCATTAGTGACTGCTTTAAGTCCTCTTCAGAAAGAAACTGAGGT
TCCTTCTCATGTCTTGATGGGTATTCCACACAGTGCTTCTGTCTCTCCCCTGTCCCCACT
TGGTGAAGCCTGTTCAAGAAGAGATTTGACTGCCATACACGAGATCTTGGAGAAAATAAG
CTACAAAGATGATGAAGGAGTAGCAAATGAGCTCTCCTTCCAAATGTGGACTGATCAAAT
GCAAGAAACATTAAATTCCAAGAAAAAGGGTGATGTTGCCTTCAGACAGAAAGATTTAAA
AGATGCAATTGAGTGTTACACACAGTTCATTGATGCTGGAACCATGGTTTCACCGACAGT
TTACGCACGGCGTAGTTTGTGTTATCTCATGAGTGACATGCCTCAAGACGCTCTGAATGA
TGCAATGCAAGCCCAAATCATTTCCCCCATCTGGCACATTGCATCTTATCTTCAGGCTGC
TGCTCTTTCTGCCATGGGAATGGAGAATGAAGCTCAAGTGGCACTCAAGGAGGGCACAAC
TCTTGAAGCAAAGAAGAATTCAACTGCTGGACAAAAGTGAGAAAGCAATGTGTCCGAAGT
AGCCTTTTACTAGTATCATCTTGGTCATCAGAAAGATGAAACATGGCATTGATTGTGATT
CAGGCTATCATTCAGGCTAGCAAATCTCGGAGTTAAATGGTTCAGACATATCAAAGTAAT
TTTTTTCTCGTTTAATTTTAAATCCAGTTTATGGTATGAAATTCATAGATGGGTTTGAGG
TGGTAATGGACAAAAGATGTGATGATGGAAATAGGCTGTCCATTTTCTCCTGTGGGGCGT
GTAAGAAGTTCTTTCATTCTTTGTGCGATTTGATCAATTGTTCATGTAGTGTTCCAATTT
TTTCCTTCACTTCCATAAAAATGGGTTGCTTCCGAAGAAGAAAAGTTGGAAGACTAAAAT
TGTTGACAGGCTTGTAATTCTGTGTACAGATACTCTTCTTTGTGTGCTTTGCTAATGAAA
TTGCTGGTTTTAGACGTTTAGGTACGTATTTTTGGTAGACACTAAATAAGATTTATTTCT
ATGTCAGTAAGAGAATTTTGTTCCCTGCAAGCCAATACTTGATGGCGTCGTGGCTAAGGC
TAATATTGTAGCTGTTCTAGTACAAACGGTGGAAAGGTAACGTTTGAGAAATTATACAAA
ACTGGCCGTGTTCAGATAGCTCCCATTGCAAATTCTTAGGCGTGAGGTATATAAACCATA
ATAAATTGCAAATTGTCGCGTCCCTCTTTCCCTCCTAGCTCCCTCAAAGAATTGGGGACT
TGGTTTTATTTTTACAACAATATTACTGGAATAGCTAGCAAACTTGTTAAATAATCCCAA
ATATTCTGTAAGCATTAATGCAAAGAATTACAATAAAAATCCCTCTGTATTATTAAGGAG
GATGAAGCCTCCACAATCCGTTCCGGCACTGCTTTATTTCCTTCCTTTCATCTCACAATG
TAATTGAAGAGAAATCAATTCATGATCCTTCAAAATTCACTTGAGAACTTCGAAATGATT
CCTTTGTTACTCCGTAATAGACTGGTTCACTACCAGAAAAGGTGATAAAGTTCCAGCCAA
AAGCTGATCCTCCAATGATTTGTGACCCATCGCTGTCAACAGTTTGTTGCTTCGTAGAGA
CAGAATTGGACTGTAAAGACTTATTATCAGATGGTTTGGTGCTTACGCCATCTGGTTGAG
GCTGCTCAGCCACCTTAACCTCTTGGGGTTGCTGGCCATCAGGTAAAACTTTACACTTCT
TTACAGAAATTGTTTCTGCTGTCAATTGCTTGTATAGTTCCATCAGTTTCTTTATCTCTG
CAAGATGCAAATTATATGCCTCATAAGCACTTAAAGCACATACCACAGAATTGGCT