Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00349.3
CDS Infomation

gene=orange1.1t00349
Sequence

ATGGATCGAAGGGATGGTCTGGCGTTACCTGGGTCAGCTTCTTTCTATATGCAACGAGGA
ATGACTGGTTCTGGGTCGGGAACACAGCCTAGTCTTCATGGATCTCCAGGCATTCATCCA
CTATCTAATCCAAGTCTACAGTTTCAATCAAATATCGGAGGCTCTACTATTGGATCAACA
TTATCTGTAGACCCTTCAAGTGCAATTTCTCCTCATGGTGTCAATGTTACTGCATCTGCT
TCAATGCCACAAAGCGAGCCTGTTAAACGGAAGAGAGGAAGGCCCCGGAAATATGGGCCT
GATGGATCCGTGTCATTGGCATTGTCTCCCTCCGTGTCTACTCATCCAGGGACCATATCA
CCAACTCAGAAGCGAGGAAGAGGACGGCCACCAGGAACTGGAAGGAAACAACAAGTATCT
TCTCTTGGTGAATCGCTCTCTGGTTCAGCTGGGATGGGATTTACTCCACATGTCATCACT
GTTGCAGTAGGGGAAGACATTGCGATGAAATTATTGTCATTTTCACAACAAGGCCCAAGA
GCAATATGTGTCTTGTCGGCCAATGGTGCCATCTCTACTGCAACTCTTCGTCAGCCGTCA
TCTTCTGGTGGCTCTGTTACATACGAGGGGCGTTTTGAGATATTGTGCCTTTCGGGCTCT
TACCTGCTCAGCGGTAATGGTGGTTCCCGCAATCGATCTGGTGGTCTGAGTGTCTCCCTT
GCTAGTCCGGATGGACGTGTCATCGGTGGAGGAGTTGGGGGAATGCTTATTGCTGCAAAC
AATGTTCAGGTAATTGTGGGGAGTTTCTTGTGGGGAGGTCCAAAGATGAAAAATAAGAAG
GGGGAAGCTTCAGAAGGCGTTAGAGACTCAGAACATCAGTCGGTCGAAAACCCAGTTACT
CCAACTACTGCTCCATCGAGTCAAAATCTCACTCCAACCTCTTCAGTAGGTGGCGTATGG
GCTGGTTCTCGGCAAATGGATATGATGCGCAATGCTCACGTTGACATTGATTTAATGCGT
GGTTGA

Peptide Sequence

PEP ID

orange1.1t00349.3
PEP Infomation
Sequence

MDRRDGLALPGSASFYMQRGMTGSGSGTQPSLHGSPGIHPLSNPSLQFQSNIGGSTIGST
LSVDPSSAISPHGVNVTASASMPQSEPVKRKRGRPRKYGPDGSVSLALSPSVSTHPGTIS
PTQKRGRGRPPGTGRKQQVSSLGESLSGSAGMGFTPHVITVAVGEDIAMKLLSFSQQGPR
AICVLSANGAISTATLRQPSSSGGSVTYEGRFEILCLSGSYLLSGNGGSRNRSGGLSVSL
ASPDGRVIGGGVGGMLIAANNVQVIVGSFLWGGPKMKNKKGEASEGVRDSEHQSVENPVT
PTTAPSSQNLTPTSSVGGVWAGSRQMDMMRNAHVDIDLMRG*

Transcript Sequence

Transcript ID

orange1.1t00349.3
Transcript Infomation

gene=orange1.1t00349 CDS=853-1878
Sequence

TATCTTTGCTGTCTGTTGTTGGGTTTCTTTGATGTTATCTGTGAGAACTGGGTTTGTGCT
ATTGTATGGCGTTTACTTGGGTTTTTGTTGCCAAGGAACATGCTTGGTGTTTAAGGCTTT
ATCAATTATCGTGAGTTGGTGAGAGAGTGGACCAGTTTCAACCTTTCTGGTCTTTGTCTT
CAAGATTAAGCCTTTTTCCTTGTTTCTTCTAGTTGGTAAGCTGTAAAATAGCCCTGCATT
TTGTCTTTTCTTTTAGGTTCTTGGCTTTAGATTTGAATTCTTTTCCTCTCTTTCTTTGTT
AATGTTCAGGGATCTTTTCTTATTTTCTGTTATCTAATCATGTTTTGCTTCCTTTTCCTT
TGGGTTGTTTAGTTCTTTCTTGTTTGGAACTTTGAAGAGGCTTTGAATCTGGGTTTGCTT
TCCTTCTTGATTCTAGCGATTTCACGTATAACTTTGACTGCATTCTTATGGGTTCTGTTC
TGTTTCTTTGTCAAAGTAATGTGCCTGCTTTGAGCTTTCTTGTCCGGAGTGGTATCACAT
TGAGTTTTTTACATGTGTGAACATTGGCGGTGTTGGATCATAATTATTTGTAATGTCATG
CATGTCTTGCATGTGACCCTTTTTCATGTTGGTTTTAAGAATCTAAGATTCATACCCTCT
GTGGTAAGCCTTGTTTTCGTTGGTCACAAATTTGAAGTCCAATAGAATTTTCATTGTTCT
GACTTCTTCAATTTTTGAAGTATTTTTCTTATTTTGAACACTGGAGCCAGTAAAGAAGTA
CCTTAGTTTTGCAATTAATTGTGTGTGAGTTGATTCAGAGTAATTTAAGTTTAGGTTTTT
CAAAGTAAATGCATGGATCGAAGGGATGGTCTGGCGTTACCTGGGTCAGCTTCTTTCTAT
ATGCAACGAGGAATGACTGGTTCTGGGTCGGGAACACAGCCTAGTCTTCATGGATCTCCA
GGCATTCATCCACTATCTAATCCAAGTCTACAGTTTCAATCAAATATCGGAGGCTCTACT
ATTGGATCAACATTATCTGTAGACCCTTCAAGTGCAATTTCTCCTCATGGTGTCAATGTT
ACTGCATCTGCTTCAATGCCACAAAGCGAGCCTGTTAAACGGAAGAGAGGAAGGCCCCGG
AAATATGGGCCTGATGGATCCGTGTCATTGGCATTGTCTCCCTCCGTGTCTACTCATCCA
GGGACCATATCACCAACTCAGAAGCGAGGAAGAGGACGGCCACCAGGAACTGGAAGGAAA
CAACAAGTATCTTCTCTTGGTGAATCGCTCTCTGGTTCAGCTGGGATGGGATTTACTCCA
CATGTCATCACTGTTGCAGTAGGGGAAGACATTGCGATGAAATTATTGTCATTTTCACAA
CAAGGCCCAAGAGCAATATGTGTCTTGTCGGCCAATGGTGCCATCTCTACTGCAACTCTT
CGTCAGCCGTCATCTTCTGGTGGCTCTGTTACATACGAGGGGCGTTTTGAGATATTGTGC
CTTTCGGGCTCTTACCTGCTCAGCGGTAATGGTGGTTCCCGCAATCGATCTGGTGGTCTG
AGTGTCTCCCTTGCTAGTCCGGATGGACGTGTCATCGGTGGAGGAGTTGGGGGAATGCTT
ATTGCTGCAAACAATGTTCAGGTAATTGTGGGGAGTTTCTTGTGGGGAGGTCCAAAGATG
AAAAATAAGAAGGGGGAAGCTTCAGAAGGCGTTAGAGACTCAGAACATCAGTCGGTCGAA
AACCCAGTTACTCCAACTACTGCTCCATCGAGTCAAAATCTCACTCCAACCTCTTCAGTA
GGTGGCGTATGGGCTGGTTCTCGGCAAATGGATATGATGCGCAATGCTCACGTTGACATT
GATTTAATGCGTGGTTGACAAGTTTCTTTCATTAGTTTCAAAAGCAATGTACATATATTT
CGTTGTTTCAAGGCCACTCCACTGATTTTCTGAAGTTCGATGACAGAGAAGAACCAGTTG
ATTTTGGGTTAACAATTCTCACATAATTCAGTCCAGACAGATAATGCAGCTCTATTGTAG
CTTAATGCCAAATTTCGCTTAAATTTGTAGTGCTCATGATTTCAACGACCATACATCTTG
TGGTTCATGTCCATTCTTGATTCATCAGAACAATGATCAATTTTACTGAGGATAAAATAG
ATACAGGTTCCATGATGGCTACAGAATAAATGAGAATGTGAAATACACGATATATAAACT
AAGCAGCAGTCCGTGTAATATTAAGGCCACCCATTGACTAAGAGGGATACCCAGTGCTTT
TCGTTCAACCTTGGGAGGCACCAACGCTGTTAGCACAAGGAGGTTGATAACTATGATCTT
TATCACATCCCGTTGTTGAGTCGCATTCATCA