Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00339.1
CDS Infomation

gene=orange1.1t00339
Sequence

ATGGGAAGGACACCGTGTTGTGATAAGAAGGGTTTGAAGAAAGGGCCGTGGGCTCCGGAA
GAAGATGAGATTCTTGTTGAATACATCAAGCGGAATGGCCATGGCAGCTGGCGTTCTCTT
CCTAAGCTCGCAGGACTTCTCCGCTGTGGCAAGAGTTGCCGGCTTAGGTGGACAAATTAT
CTTAGGCCAGACATAAAGCGCGGCCCCTTTACCGAAGAGGAAGAGAAGCTTGTCATTCAG
CTTCATGGCATTCTTGGAAACAGGTGGGCTGCCATTGCCTCTCAGCTCCCTGGAAGAACT
GATAACGAGATCAAGAACTTGTGGAACACCCACCTGAAGAAGCGGATGCTCCTCATGGGT
CTTGATCCACAAACTCATGAGCCCTTCAGCTCTTCTGGACCAGCCATCAAAGCGCCTGCA
ACTCCGACCACCCGCCACATGGCACAGTGGGAGAGTGCTAGGCTTGAAGCCGAAGCTAGG
CTTTCCAGGGAATCCTTACTCTTCAATACACCATCTATGGGAAAGACTGATTCTGATCAT
TTTCTTCGCATGTGGAATTCTGAGGTTGGAGAATCGTTCAGGAAGTTCAATAAGGGAGTG
AAAACTGCATGTCAAAGCCCGAATTCTCAGGTTTCTTCTTCCACAAAATGTGGATCAGTT
TCAGCGGTCTCAACGGAGATCGGACACAACTTAGCAGGGTCCTCTGCTACGCCAAGCAAT
CAAAATGAAGATACAGAATGCAAGAGCTCTAAGTCATGCACCGAGGATATGGTTGCAGGG
TCTGATACCTCGAGTTCCAATGACTTGCAGGATTCTTCAGACTCTTCTCTGCAATTGCTG
TTAGATTTTCCCATTAACAATGATATGAGTTTCTTAGAAGATAACTATTTTGCTTCTTCT
GCAATGTTCACTGGAGACTCATTGATCTGCCCACTCTAA

Peptide Sequence

PEP ID

orange1.1t00339.1
PEP Infomation
Sequence

MGRTPCCDKKGLKKGPWAPEEDEILVEYIKRNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
LRPDIKRGPFTEEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRMLLMG
LDPQTHEPFSSSGPAIKAPATPTTRHMAQWESARLEAEARLSRESLLFNTPSMGKTDSDH
FLRMWNSEVGESFRKFNKGVKTACQSPNSQVSSSTKCGSVSAVSTEIGHNLAGSSATPSN
QNEDTECKSSKSCTEDMVAGSDTSSSNDLQDSSDSSLQLLLDFPINNDMSFLEDNYFASS
AMFTGDSLICPL*

Transcript Sequence

Transcript ID

orange1.1t00339.1
Transcript Infomation

gene=orange1.1t00339 CDS=552-1490
Sequence

CCATTAATGCATTTCGCTTTCAAACTTCACTGCATCATTTTCTCTCGTCTTTATTGCTTC
TGTGCTTCTGAAAAACCCCATAAACGAAACCCCTCCCATTAACTCTCTTTACTGTTTGTA
CAAGTTTCTTCCTTGCGCTCAATGATGATTCAATTTCTCAATGCGTGTAATTGTCAACAT
AAATACATCCCTCCATCCATATATGTAGATACACACACACACCCCCCTATATTTATTGCA
AAGCCAGCTTAAACCTCGCTGAGCGTCCCATCTCTCTGCTCTAATGCTCTTGGCTTGCAC
CCACGTATTTATGAGAACAACAATCAATAAACAGATAATAATTTTCACTTTCGATTTTCC
CTAGATAAATACCGTAGCAGCATTTAATGCCCTTTTTTCTCTGTTACTAGTGTGTAACTT
GCTTGCTTCACAAATCACAACCAAACTGTGAGCTGAGCTTTAAAGATTGAAGGGTTTGCT
TTTATCTGTTCATTGGGTGGTGCTACTGTTGGTGGTGGTCGTTGAGCATTGATAGTGAAC
AAGAGATAGAGATGGGAAGGACACCGTGTTGTGATAAGAAGGGTTTGAAGAAAGGGCCGT
GGGCTCCGGAAGAAGATGAGATTCTTGTTGAATACATCAAGCGGAATGGCCATGGCAGCT
GGCGTTCTCTTCCTAAGCTCGCAGGACTTCTCCGCTGTGGCAAGAGTTGCCGGCTTAGGT
GGACAAATTATCTTAGGCCAGACATAAAGCGCGGCCCCTTTACCGAAGAGGAAGAGAAGC
TTGTCATTCAGCTTCATGGCATTCTTGGAAACAGGTGGGCTGCCATTGCCTCTCAGCTCC
CTGGAAGAACTGATAACGAGATCAAGAACTTGTGGAACACCCACCTGAAGAAGCGGATGC
TCCTCATGGGTCTTGATCCACAAACTCATGAGCCCTTCAGCTCTTCTGGACCAGCCATCA
AAGCGCCTGCAACTCCGACCACCCGCCACATGGCACAGTGGGAGAGTGCTAGGCTTGAAG
CCGAAGCTAGGCTTTCCAGGGAATCCTTACTCTTCAATACACCATCTATGGGAAAGACTG
ATTCTGATCATTTTCTTCGCATGTGGAATTCTGAGGTTGGAGAATCGTTCAGGAAGTTCA
ATAAGGGAGTGAAAACTGCATGTCAAAGCCCGAATTCTCAGGTTTCTTCTTCCACAAAAT
GTGGATCAGTTTCAGCGGTCTCAACGGAGATCGGACACAACTTAGCAGGGTCCTCTGCTA
CGCCAAGCAATCAAAATGAAGATACAGAATGCAAGAGCTCTAAGTCATGCACCGAGGATA
TGGTTGCAGGGTCTGATACCTCGAGTTCCAATGACTTGCAGGATTCTTCAGACTCTTCTC
TGCAATTGCTGTTAGATTTTCCCATTAACAATGATATGAGTTTCTTAGAAGATAACTATT
TTGCTTCTTCTGCAATGTTCACTGGAGACTCATTGATCTGCCCACTCTAAGCAAGCTGTT
TCGTTGGGTGTTGCTTAACTTTTGATCTTGAATTTTGGCATCAGAACCTTATGAGTTATG
AAGTTAAAAAGTGGAGAAATGAGAATTTTGTGGTGGTTAAGAGGTGTAGTTTCTTTCAAC
TGGGTAGGTTTTAGAGGATTTAATGTACCATCAATAGGTTTAACCGGAAACCCAGTTTAT
TTGGCATGTATAGAAGATATATAAGTTCCCTAACCCGGTTTGAACCTATCAATTAGATAT
GCAAATACTTATTCTGTATGATACT