Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00333.3
CDS Infomation

gene=orange1.1t00333
Sequence

ATGGCTAGTGAGGCGTCTGCCAAGGTTATTGACGGAAAAGCAGTGGCAAAGCAAATCAGA
GATGAGATAACTGGTGAAGTTTCCAGGATGAAGGATGCCATTGGAGTTGTCCCTGGGTTA
GCTGTTATTCTTGTTGGAGATAGGAAGGATTCTGCAACTTATGTTCGCAACAAGAAAAAA
GCTTGTCAATCTGTGGGGATCAATTCTTTTGAAGTTCATTTACCTGAGGACACCTCTGAA
CAAGAAGTACTCAAGCATATTTCAGTCTTCAATGATGATCCTTCAGTTCATGGCATCCTT
GTGCAGTTGCCTCTGCCTTGTCATATAGATGAGCAGAGCATCTTAAATGCTGTCAGCATG
GAGAAAGATGTGGATGGTTTCCACCCGCTGAATATTGGCCGTCTAGCCATGCGAGGTAGA
GAACCCTTGTTCATTCCTTGTACGCCTAAAGGTTGCATAGAGTTGTTGCATAGATATGGC
TTTGATATCAAAGGAAAAAGGGCTGTCGTGATTGGCCGAAGCAATATTGTTGGGATGCCA
GCTGCTTTGTTGCTCCAAAGGGAAGATGCTACTGTTAGTATTGTCCATTCCAGAACTAAG
AACCCTGAGGAGATTACGAGACAAGCCGATATCATAATTTCCGCTGTAGGGCAACCAAAT
ATGGTAAGGGGGAGCTGGATAAAACCTGGTGCAGTCATAATTGATGTTGGAATAAACCCA
GTCGAGGATGCAAAAAGTCCCCGAGGTTACCGGTTGGTTGGAGATGTTTGCTACGAAGAG
GCATGTGAGGTTGCTTCAGCTATCACTCCAGTTCCTGGAGGAGTTGGTCCAATGACTATA
GCAATGCTGCTCTCTAATACTCTCACTTCGGCAAAGAGGGTGCACAACTTCCAGTGA

Peptide Sequence

PEP ID

orange1.1t00333.3
PEP Infomation
Sequence

MASEASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKK
ACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM
EKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMP
AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP
VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ*

Transcript Sequence

Transcript ID

orange1.1t00333.3
Transcript Infomation

gene=orange1.1t00333 CDS=772-1668
Sequence

GAGTACGCTTAAATAATCAGCCAAGTATGAACGCACCGTTTTGCCTTTACTCTCTCTCGT
GCGCGGCTGAGCGCGCACTGAATCAGTGAGAGTGAGAGACCCTAGTTATATTATTATTTT
ATTATATAGACAAACCAGAAGAAAACGCAAAACGGCAAGCAAACTACTGAACCCGGGCTG
TAAAAGAATTCGAATGGGTGGTTCGAGGTCGATGATATTTGCTGACTGCTCTTCTTCCAC
GACGGCTCGGCTCGTTCCTTTCGGCCGAAGCCGATTACTTTGCGGCGGAGGCGCCCTTTG
TGCTCGGCGGCGTCTTCATGTGGGAGTGGGACCTTCACTTCCTGCCTCTCTCCGTACCAC
CCTCACCGTCCACTCTTCTCCCTCACCGTCTCTTCCTGTTATGAACGGTATATTTATAAT
TCCAACCTTTTTTTTTTCCTTTTTTTTTAAAAAAAAAAATTCCTATAATCAGGACTTCAA
TTTTACGACAATATTTAATGTTAGGTTTTAGGTCGCTTATCTTATCTGCACTTAATGTGT
GTTTAGTTGTAATGAGGGTGGTTGCTAGCAATATAGATTTTCTGTTACTTGCAATGGTTT
TGTCCTATCATTTAGTTTACTTCTTCTCACTTTCTGTAAGTGGGCTACTCTGACATTGCT
TTGTATCTGAATTGGTTTCATTGTATATACTCCAATAATTCATATGATGAATTTTATGTA
CTTTTGATACTCCCCTCTTTACCTGTTTGGTTAGTGTCTTGTTCAGCAACTATGGCTAGT
GAGGCGTCTGCCAAGGTTATTGACGGAAAAGCAGTGGCAAAGCAAATCAGAGATGAGATA
ACTGGTGAAGTTTCCAGGATGAAGGATGCCATTGGAGTTGTCCCTGGGTTAGCTGTTATT
CTTGTTGGAGATAGGAAGGATTCTGCAACTTATGTTCGCAACAAGAAAAAAGCTTGTCAA
TCTGTGGGGATCAATTCTTTTGAAGTTCATTTACCTGAGGACACCTCTGAACAAGAAGTA
CTCAAGCATATTTCAGTCTTCAATGATGATCCTTCAGTTCATGGCATCCTTGTGCAGTTG
CCTCTGCCTTGTCATATAGATGAGCAGAGCATCTTAAATGCTGTCAGCATGGAGAAAGAT
GTGGATGGTTTCCACCCGCTGAATATTGGCCGTCTAGCCATGCGAGGTAGAGAACCCTTG
TTCATTCCTTGTACGCCTAAAGGTTGCATAGAGTTGTTGCATAGATATGGCTTTGATATC
AAAGGAAAAAGGGCTGTCGTGATTGGCCGAAGCAATATTGTTGGGATGCCAGCTGCTTTG
TTGCTCCAAAGGGAAGATGCTACTGTTAGTATTGTCCATTCCAGAACTAAGAACCCTGAG
GAGATTACGAGACAAGCCGATATCATAATTTCCGCTGTAGGGCAACCAAATATGGTAAGG
GGGAGCTGGATAAAACCTGGTGCAGTCATAATTGATGTTGGAATAAACCCAGTCGAGGAT
GCAAAAAGTCCCCGAGGTTACCGGTTGGTTGGAGATGTTTGCTACGAAGAGGCATGTGAG
GTTGCTTCAGCTATCACTCCAGTTCCTGGAGGAGTTGGTCCAATGACTATAGCAATGCTG
CTCTCTAATACTCTCACTTCGGCAAAGAGGGTGCACAACTTCCAGTGATCCCTACAAGAT
TTCAAGATGATTGTTCTAGTAGGGAAATCTACCATTCAAATTCATGTTTCAGATCCAGAT
ACTGCTGCTCCTGTCTCTGTATCAGTTTGAGCCTCATTTTTTGTGGGAATAAAGTCTCAA
ATCCAGCCGTGTCATATCAGTAGTTTAGGATTATGAAATACTAGAGTCTTAAAAGCAGAG
TTCAAAGGATTCCAGTCCTGCCAGAAAACCTGCGGATTATTTGTCAGTGGAGGTTTCGTA
GCTTTTGGTTTATGTCCCAGCCCTCTGACGCCAAAATCTGGCAAACTGGGTGGTTTTCTT
AAACCAAAATGTTTCTAACTAATTTATTTGGTTGTTTAAACACTGATTGTGTTGGTTGAA
ATTTTTTGTCAAGGGCGATGGAACGAAAGAAATGGTTCATTTTCAGTTTTTGCTGTGAAT
GAGAACGAGCATAAGGATCCGAGGGAGGTTATTTTTCAAAAAACTCATCTGTATCCTAGT
GCCATGCTGTACTGGCCTTCCAGCCCACCATTCTCTAGTAATTTTATTATACCAATGTCC
CATGAATTCTTCTGTTCACTGAGTTCAATCGGACTGTTTATGTTCATGTAGAAAAGAACA
AATTGTGGTATGTGACCCTCATAATTTTTAACAAAGAGTTGAAATACTAGAGTCTTAAAA
GCAGAGTTCAAAGGATTCCAGTCCTGCCAGAAAACCTGCGGATTATTTGTCAGTGGAGGT
TTCGTAGCTTTTGGTTTATGTCCCAGCCCTCTGACGCCAAAATCTGGCAAACTGGGTGGT
TTTCTTAAACCAAAATGTTTCTAACTAATTTATTTGGTTGTTTAAACACTGATTGTGTTG
GTTGAAATTTTTTGTCAAGGGCGATGGAACGAAAGAAATGGTTCATTTTCAGTTTTTGCT
GTGAATGAGAACGAGCATAAGGATCCGAGGGAGGTTATTTTTCAAAAAACTCATCTGTAT
CCTAGTGCCATGCTGTACTGGCCTTCCAGCCCACCATTCTCTAGTAATTTTATTATACCA
ATGTCCCATGAATTCTTCTGTTCACTGAGTTCAATCGGACTGTTTATGTTCATGTAGAAA
AGAACAAATTGTGGTATGTGACCCTCATAATTTTTAACAAAGAGTTTTCAAAATCATTTT
TCACCAGGCGCTTTTTTTTTTTTTTTGATTCCATTGTTCAATGCTGTAATTATATCCTGG
ACGACGAACTCGCAGTCGGTTGACATACAAGAAGTTTTGGTTTGAAAAAAAGGACGGCAT
CGATAGAATCGATTTAGTTCACCACTTGAGAAGAGAAGCTGGCAACCAAAGCCATTATTA
TTATGACCAAGACCAGCCATTGTCTTGGATCCTTATTGGCCCCTTTCGCATGAGTGCATA
ACTCACCCACGCTTCGAATTAACTAGTCATTTTAACTAGTTTTCTCAACCTTACTTTTGT
AATTGTAAAAGCTTAGGCAAGATATGCTACGGGATCTAAAGGCACTTGTACTGCCTGCTC
GATCATTTACGATGCATCAAACCTTTGCACAGAAATACAAGCCCTTTTCCATCATAAACA
CATGATAATCTGCAGGCTTCTTCACTGTTCTTGGACAACTTGAAAACATCTTCTTTCAAT
ATTCAAAATCAGAAATCCAAAACCACTAAAAGATTGCAATCATTGTACTATTTTCTCAGA
AAGATCAATTCGTGCTTCAAAACGGTCTATCCCAGTTTGATTTTGCTGCCTTGTACTACG
GAGAACTGAGACCTGGAATATAAATTGAACAAGAAAAGATTAACTTAGAATAGTATTTTA
AATAATGAAGAATCAAAAGACACCAACAATTGCACAAAGATGAGGCTGCATTTTATGTTA
CCAGGTAAGAAGATAATTGTAGATGTCTCATTTATATTAATATGTAGACAACTAAGCAGG
AAAACCATCCCTCACCTATACTGGTAAGGAATGAACTTTTAGATTGCTATTCTTTACTTC
TGGTAGCATGTATTTTGTCTTTCAAAAGAACAAAATTAATAGGTGGAAATTGAAGGAACT
GTTAGGTCTTTAAACTATAAAGACTTAACAGACAGCGATACCTTGGGCCTTTCCATAGAG
CTTCCAAAATATCCAACGCCAAAAGACAATGAAGAATAAGCAGCTGCTATCTCTATTGAT
TTCAGCTCTGGTGGATTTCCTGAAACCTATCAGACAAAAGTAAGTTAAGATGACCACCCT
GACAACCAAACTTTCAGCAAAGGTACTCACCATCACAGGAGCATCAGCCTGCACCATTAA
TATCCCTGCACTTTTATCAGTACCATTTTGACTGCTCTCTTGGACGATAGGGCATAAAAC
TGTCATGCATGCAGAGGCAGGACCAGCTTGTGAACTGAAAGAAGATGACCTTGTCAATCA
CACCAACTCAGCATTTTAAAAATAAATAAATAAATAAAATAAAAGAGGATTCAAGGGAAG
CAAAACTTGGTAGGTTTCTAAAATCTTCAGAAACAAGAAAAGGCATTTAAGATAGAAAAT
TGGGCAACTAAATACGTTTGTATATATACAGCACTTAAAACTTTTGCCTCCTAAATAGAT
TTGAAAGACTCCAAAAAGACTTCAACAACAGACATAATTCCAAAGCTCAAGCTTTATAAT
ATTAAATAGAGCTATAGTTGACAATACATACATTCCAATAGGTAAAATATTTGACTCTGC
ATTCCCATAAGTACAATCAGGTGACATATATGTGGAAAACTAAATAAACAGACAAAGTGA
TCATGTGCAAACATTCTTAATGGAAAAAGGAGGTAAAAGAACAAAAAGCAGAATTTAGCA
ATGCCAATCACAACAATAATTATCCAATTTTCTCTTTTATTTGGCAGATCAACACAATCA
CCGAAAGTAGAAAGGGGGCTGCAGCCTAAGCATACAAGAAGTCTTACCAAAAACAGTGGT
TTTAATGAAGAATTATAAATGTTAGCTTAAAGATTGATCATACAGCGACAATGAGACACA
GCACTCCCGAGCAGCGAATCCTTTCATTAAGTATTCTCCCCCACCACTAACACAAGATCC
AACAATGAATGGAGCTCCAAAGGGACCTTTAGAGGAAGCCCAACAACCTGAACCATACAT
AGCTGCTAATCCTACACGTCCACTAACCTGATTTAAAAGAGGAGAGAGAAAAGATATGCT
TTTACATGATAACAAAATTATAATAGTATGAAAAGACATTGAGAATTACCTAATCCATTA
CCTTTAATGCAATACCACCACTTGAGGCACCAGATGCTAAATGCCCTTCAGAGTCAACAC
AAATAACTCCAACTGTGTCCATGATGTTACTGTCCTCTTCCAGAACTTGAGGTATTGATA
ATTGGCCACTGCCATTCCACTTTAAGGGCTCACAAGAACGTCCAGATGTAAAAGCAGTCT
CTTCAGCCACGCTAGAATGTCCTTCAGCAGAGGTATTAGTCTTAGCTTCAGCATCAGCAA
GTATTGATTTGTATTTTCTCCACTGTGCTCTTGCCCTCTCTGTTACCATCCACTATTTCA
AAAAACAAAAATTGCAACATACCCATCATCCTAAGATATACAAGAAGATATTTTGACTGA
AATATTTTTGCACACGAAATTAAATAAAAAGGAACTTTTTAATTATCAGAATCAAGGTAG
ATAAACTAACTATACCTCATCAGCCTCGGCTATAGTTGCTGGTAATGCAATGCCTTTGGA
TTTTGCCCATACACGGGCACCTTCACCCACCAAGAACCTGGACAAAACAGAACACTTCTT
AAACTAGGGAGAAAAAAAGTTCATTTTATATGATATCATTTCAACAGCAGTTCATTGAAT
GATAATGGCGCTCCATGTCTGCCTCAACATTAAAAAC