Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00321.1
CDS Infomation

gene=orange1.1t00321
Sequence

ATGAGTAAAAAGAGAGTGTTGGTGGTCGGAGGCACAGGCTACTTGGGGCAGCATTTACTG
CAAGGCTTATCCGAGATCGAAGGAAAGCCTTATGACGTGGCGGCCACTCACCACTCCACG
CCGCTGCCTCAGCTCCTGCTGGACGCCCTTCCTCACTCTTTTGTTTTTTTCGACGTCGAT
TTGAAATCCGGATCAGGATTCGATGCCGTTGCACTCAAATTTGGCCAGCCCGACGTGGTC
GTGAACTGCGCCGCTCTCTCCGTGCCACGTGTTTGTGAAAATGACCCCGATTCTGCTATG
TCCATTAATGTACCTTCTTCTCTTGTAAATTGGTTATCAAGTTTCACTGAGAATAAAGAA
AATCTCTTGATTCATTTATCGACCGATCAAGTTTATGAAGGAGTCAAGTCTTTCTATAAA
GAAGAGGATGAAATTGCTCCGGTGAATGTTTACGGCAAATCGAAAGTGGCAGCGGAGAAG
TTTATTTATGAGAAATGCTCAAATTTTGCAATTTTGAGAAGCAGTATCATATATGGGCCG
CAAACTATCTCGCCCGTACCAAAATCTCTTCCGATTCAGTGGATTGATAGTGTTCTTTCA
AAAGGAGAGAAAGTGGAATTTTTTCATGATGAGTGCCGCTGCCCAGTATATGTCAGGGAT
GTTGTGAAGATTATACTGGCTTTGACAAATAGATGGTTATCAGAGGACAAGCAAATGCAG
TTACTTCTGAATGTGGGTGGACCAGACAGGGTATCACGGGTTCAAATGGCTGAGGTGGTT
GCTGAGATAAGAGGATACAGTACCTCTTTAATCAAACCAGTTTCTGCATCATCTGTTGAT
CGTGGCGTCCAGTCTCCAGCTGACATTTCTATGGACATCACAAAACTGGTTCAGACACTT
AATATTGATCCAGTTACATACAAAGATGGTGTCAAATTGACACTTGCAGCTGAAGCTACC
TAA

Peptide Sequence

PEP ID

orange1.1t00321.1
PEP Infomation
Sequence

MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD
LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE
NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP
QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ
LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL
NIDPVTYKDGVKLTLAAEAT*

Transcript Sequence

Transcript ID

orange1.1t00321.1
Transcript Infomation

gene=orange1.1t00321 CDS=513-1475
Sequence

AACGAATCAGAAGCTTCTTGCTCTTTCATTATTGTTGATCCCGATCCGTCACAAGAAAGT
GCTCTCCTTGAGGCTCAAACTTCACTTCCGTTAGATTTGAGTGTGCTGGTATGATAATGT
ATAAGATTGAATTATCTAAATAAGCTCATTCAATTCCAAGCATTCACGTCCATTGGGTCG
TGTTGATTATATCGCCGCTCGCCGGCTTTATTCAAATTGACAATCACGTGACAACGAAGA
TCCGATTCCGAACCTCAACCTACACGAGAGAACGAGATAGTAAAAGTTACGCGTCACGTG
TATCTTAGATGACAAATCGTCCAAAAGACGAGACTATAAACGACATTTCGACTCGTTCGG
ATACCGACGGCGATATTCCCCGATTGAATTGGCAACGAAAATTTCCGAAATCATCCTCTA
TCAATTTTAAAAATTAATTAGCCTTAAAGATTTCAAATTGCGGAGAAACGGATCAGAAGC
TTTTGTTTTCTTAATTATTGTTGAATCAGAGGATGAGTAAAAAGAGAGTGTTGGTGGTCG
GAGGCACAGGCTACTTGGGGCAGCATTTACTGCAAGGCTTATCCGAGATCGAAGGAAAGC
CTTATGACGTGGCGGCCACTCACCACTCCACGCCGCTGCCTCAGCTCCTGCTGGACGCCC
TTCCTCACTCTTTTGTTTTTTTCGACGTCGATTTGAAATCCGGATCAGGATTCGATGCCG
TTGCACTCAAATTTGGCCAGCCCGACGTGGTCGTGAACTGCGCCGCTCTCTCCGTGCCAC
GTGTTTGTGAAAATGACCCCGATTCTGCTATGTCCATTAATGTACCTTCTTCTCTTGTAA
ATTGGTTATCAAGTTTCACTGAGAATAAAGAAAATCTCTTGATTCATTTATCGACCGATC
AAGTTTATGAAGGAGTCAAGTCTTTCTATAAAGAAGAGGATGAAATTGCTCCGGTGAATG
TTTACGGCAAATCGAAAGTGGCAGCGGAGAAGTTTATTTATGAGAAATGCTCAAATTTTG
CAATTTTGAGAAGCAGTATCATATATGGGCCGCAAACTATCTCGCCCGTACCAAAATCTC
TTCCGATTCAGTGGATTGATAGTGTTCTTTCAAAAGGAGAGAAAGTGGAATTTTTTCATG
ATGAGTGCCGCTGCCCAGTATATGTCAGGGATGTTGTGAAGATTATACTGGCTTTGACAA
ATAGATGGTTATCAGAGGACAAGCAAATGCAGTTACTTCTGAATGTGGGTGGACCAGACA
GGGTATCACGGGTTCAAATGGCTGAGGTGGTTGCTGAGATAAGAGGATACAGTACCTCTT
TAATCAAACCAGTTTCTGCATCATCTGTTGATCGTGGCGTCCAGTCTCCAGCTGACATTT
CTATGGACATCACAAAACTGGTTCAGACACTTAATATTGATCCAGTTACATACAAAGATG
GTGTCAAATTGACACTTGCAGCTGAAGCTACCTAAGTACCTAATGTTACCATACACTGTC
AGTGATTCCTCCATTGTTCTCCAAATTTTAAATGACAGAATAAGGCTACAGTATAAAATG
TAATTTACATTCTTTACTCAAGTGCATTTGGTGTAAGAGTACAAGATATTCCAGGGGACA
ACTAGTGCTTGATAATAGATGTTTGCGACCGCCTATTCTGGTTTGAAATCGCTGCAAAAC
AAGAGGTATAGATGTATAGTGATAGTCATCTTCTGGAAATGTTGGCCATGTATTTTTCTT
CTTTTTTTTTCCCTGTTTCTTCCAGATTGTGTAGAGCACACAACCATATTTGCTGGAAAA
TTTTTTGAATGCAATTATGTATTGTTATGCGACT