Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00320.4
CDS Infomation

gene=orange1.1t00320
Sequence

ATGGATAGGAAACAGCAGCATATTGCTATATTTACAACTGCAAGCCTGCCTTGGTTGACT
GGGACAGCTGTGAATCCTCTGTTCCGTGCTGCCTATCTTGCAAAAGACGGGGAAAGAAGA
GTTACTTTGGTGATTCCTTGGTTATCTTTGATACATCAAAAACAAGTATATCCCGGAAAC
ATCACCTTTGCTTCACCTAAAGAACAGGAAGCATATGTTCGTTGGTGGCTTGAGGATAGG
ACTGGGTTTACATCTACTTTTGATACACGTTTCTATCCTGGGAAGTTTGCTGCAGATAAA
AAGAGCATTCTTGCAGTAGGAGACATTACGGAAATCATCCCTGATGAAGAGGCGGATATT
GCTGTCCTTGAGGAGCCTGAGCATCTTACGTGGTTTCATCACGGCAAGAGATGGAAAGCT
AAATTCCGCTTTGTTGTAGGAATCGTGCACACCAATTATCTGGAATATGTCAAAAGGGAG
AAGAATGATCGATTACAAGCATTTCTTCTTGAATTTGTAAATAGCTGGCTTGCTCGTGTC
CATTGTCACAAGGTAATTAGGCTATCTGCTGCCACACAGGAATATCCCAATTCCATCGTC
TGCAATGTTCATGGAGTTAATCCCAAATTCCTTGAAATTGGCGAGAAAAAGATGGAGCAA
CAACAAAATGGGAACAAGGCTTTCACAAAGGGCGCATACTATATTGGGAGGATGGTGTGG
AGTAAAGGCTACGAGGAGCTACTTGGACTTCTTAATATTTACCACAAGGAGCTAGCAGGG
CTTGAAATGGATTTATATGGCAATGGGGAGGACTTCGATCAAATTCAAAGAGCAGCTAAA
AAGTTAAAACTTGTAGTTAGAGTTTACCCTGGACGTGATCATGCAGACCCCATATTCCAT
GATTACAAAGTGTTCCTGAATCCAAGCACAACAGATGTTGTTTGCACAGCGACAGCTGAA
GCATTGGCCATGGGCAAAATCGTTGTCTGTGCCAACCACCCCTCAAATGACTTCTTCAAG
CAATTCCCAAATTGCCGAACTTACGATGGCAGAAATGGGTTTGTTGAAGCCACACTCAAA
GCACTTGCTGAAGAGCCTGCTCAACCAACTGATGCACAGACGCATCAACTGTCGTGGGAG
TCTGCAACAGAAAGGTTTTTGCAAGTTGCTGAGCTGGTCGGGGATGTTGTGACGAAACGG
TCAAAAAGTCCTTCTAGGCACTTGGAATCCGAGTCATTAAATTCGAAGAGAATCATTGAG
GATGCCTTCGGATATTTGCATTACGTTGCGTCTGGATTTGAAACATCAAGAAGAGCATTG
GGTGCAATTCCTGGGAGCTTGCAACCGGATGAACAACTGTGCAAGGAACTTGGATTGGTA
ACAGAACTGGGCAAAGGACACTGTCACCGACCAAACGGAAGTTGGTTCGGTTCGGTTTTA
GTACTAGTCGGTTCGGTGATTGGCGTATTATTTGTAAAATCTGTAACACTGAAATTGTCC
GTAAACGCACGTGTTGGTAGCAATAAGCATGCATTACTAAGGCTCCATTTGGCTTAG

Peptide Sequence

PEP ID

orange1.1t00320.4
PEP Infomation
Sequence

MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN
ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI
AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV
HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW
SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH
DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK
ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE
DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGKGHCHRPNGSWFGSVL
VLVGSVIGVLFVKSVTLKLSVNARVGSNKHALLRLHLA*

Transcript Sequence

Transcript ID

orange1.1t00320.4
Transcript Infomation

gene=orange1.1t00320 CDS=73-1629
Sequence

AATCAATTTTTGTGTTTAATTTCTCGATCTATAAGAATTCCGACTTAATTTTTTATACAG
ATATTGTCGCTGATGGATAGGAAACAGCAGCATATTGCTATATTTACAACTGCAAGCCTG
CCTTGGTTGACTGGGACAGCTGTGAATCCTCTGTTCCGTGCTGCCTATCTTGCAAAAGAC
GGGGAAAGAAGAGTTACTTTGGTGATTCCTTGGTTATCTTTGATACATCAAAAACAAGTA
TATCCCGGAAACATCACCTTTGCTTCACCTAAAGAACAGGAAGCATATGTTCGTTGGTGG
CTTGAGGATAGGACTGGGTTTACATCTACTTTTGATACACGTTTCTATCCTGGGAAGTTT
GCTGCAGATAAAAAGAGCATTCTTGCAGTAGGAGACATTACGGAAATCATCCCTGATGAA
GAGGCGGATATTGCTGTCCTTGAGGAGCCTGAGCATCTTACGTGGTTTCATCACGGCAAG
AGATGGAAAGCTAAATTCCGCTTTGTTGTAGGAATCGTGCACACCAATTATCTGGAATAT
GTCAAAAGGGAGAAGAATGATCGATTACAAGCATTTCTTCTTGAATTTGTAAATAGCTGG
CTTGCTCGTGTCCATTGTCACAAGGTAATTAGGCTATCTGCTGCCACACAGGAATATCCC
AATTCCATCGTCTGCAATGTTCATGGAGTTAATCCCAAATTCCTTGAAATTGGCGAGAAA
AAGATGGAGCAACAACAAAATGGGAACAAGGCTTTCACAAAGGGCGCATACTATATTGGG
AGGATGGTGTGGAGTAAAGGCTACGAGGAGCTACTTGGACTTCTTAATATTTACCACAAG
GAGCTAGCAGGGCTTGAAATGGATTTATATGGCAATGGGGAGGACTTCGATCAAATTCAA
AGAGCAGCTAAAAAGTTAAAACTTGTAGTTAGAGTTTACCCTGGACGTGATCATGCAGAC
CCCATATTCCATGATTACAAAGTGTTCCTGAATCCAAGCACAACAGATGTTGTTTGCACA
GCGACAGCTGAAGCATTGGCCATGGGCAAAATCGTTGTCTGTGCCAACCACCCCTCAAAT
GACTTCTTCAAGCAATTCCCAAATTGCCGAACTTACGATGGCAGAAATGGGTTTGTTGAA
GCCACACTCAAAGCACTTGCTGAAGAGCCTGCTCAACCAACTGATGCACAGACGCATCAA
CTGTCGTGGGAGTCTGCAACAGAAAGGTTTTTGCAAGTTGCTGAGCTGGTCGGGGATGTT
GTGACGAAACGGTCAAAAAGTCCTTCTAGGCACTTGGAATCCGAGTCATTAAATTCGAAG
AGAATCATTGAGGATGCCTTCGGATATTTGCATTACGTTGCGTCTGGATTTGAAACATCA
AGAAGAGCATTGGGTGCAATTCCTGGGAGCTTGCAACCGGATGAACAACTGTGCAAGGAA
CTTGGATTGGTAACAGAACTGGGCAAAGGACACTGTCACCGACCAAACGGAAGTTGGTTC
GGTTCGGTTTTAGTACTAGTCGGTTCGGTGATTGGCGTATTATTTGTAAAATCTGTAACA
CTGAAATTGTCCGTAAACGCACGTGTTGGTAGCAATAAGCATGCATTACTAAGGCTCCAT
TTGGCTTAGTGGTTTTTATTACATATTAGTTTGGAAATTAAAATGATTTTTAATTTGATA
ATTTAGAATTAAGGTGATTTTAGTCCAGCGCAGTAATTTGAAATTTAAG