Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00307.2
CDS Infomation

gene=orange1.1t00307
Sequence

ATGGAACCCGAAGACGAGCAATCGAATTCAATGATGGAGGAGATCTGCTCGAACGGCGGC
GAAGAATCGGCGCGTACCAGACCAATCATAAGCGGGGAGCAGCTGGACGTCGAGGCTTAC
GCGAGCCTGTACCAAGGGAGGACGAAGATCACGCGGCTAATGTTTATCGCCGATCACTGC
GACATCGCTTCGATGCAGCTTGAGGCGCTTCGAATGGCCTACGATGAGATTAAGAAAGGC
GAGAACACGCAACTTTTCAGAGAGGTTGTGAAGAAGATTGATGGGAGGCTGGGCCCCAAT
TATGCCATGGACGAGGCTTGGTGCGATTCCGTGGATCGCAGAGCCGAACAGCGCAAGGAG
AAACTTGAGAACGAACTCAATGCTTATAGGACAAATTTGATCAAAGAAAGTATAAGAATG
GGATATAATGATTTTGGAGACTTTTACTATGCTCATGGTGCACTTGGGGATGCTTTTAAA
AGTTATGTTCGCACTCGTGATTATTGCACTACATCAAAGCATATTATTCATATGTGTATG
AGTGCAATTCTGGTCAGCATTGAGATGGGTCAATTTACTCATGTGACAAGCTATGTCAGC
AAAGCAGAACAAACACCTGAGGCTCTTGAACCTGTTACGATTGCAAAACTACGTTGTGCT
GCAGGATTGGCTCATTTGGAGGCTAGAAAGTACAAGCTTGCTGCTCGTAAGAGCAAAGTT
ATAGATAATGTCAACTTCCGAAATTTCTTAGAGCTGGTTCCTGAAGTTAGGGAGCTTATT
AACGATTTCTACTCTAGCCGTTATGCATCATGTCTGGATTACCTTGGAAATCTTAAGGCA
AACCTGTTGCTTGATATCCATTTGCACGACCATGTTGAGACGTTGTATGATCAAATACGT
AACAAAGCCCTCATCCAGTATACACACCCATTTGTGTCTGTTGATTTGCACATGATGGCA
AATGCTTTCAAAACAAGTGTTGCTGGGATAGAGAAAGAGCTTGAAGCCTTGATTACTGAC
AACCAAATACAGGCTCGGATTGACTCACACAACAAGATTTTGTATGCACGACATGCGGAT
CAAAGAAATGCAACTTTCCAACGGGTTTTACAGACTGGCAGTGAATTTGATCAGGATGTG
AGGGCAATGTTACTGAGGGCAAATCTTCTGAAGCATGAATACAATGTTAGGGCTGCTAGG
AAACTTTGA

Peptide Sequence

PEP ID

orange1.1t00307.2
PEP Infomation
Sequence

MEPEDEQSNSMMEEICSNGGEESARTRPIISGEQLDVEAYASLYQGRTKITRLMFIADHC
DIASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKE
KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCM
SAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKSKV
IDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIR
NKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHAD
QRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRAARKL*

Transcript Sequence

Transcript ID

orange1.1t00307.2
Transcript Infomation

gene=orange1.1t00307 CDS=146-1354
Sequence

GCGTGCGAGGCCATCTCCCTCTCCAGAGACTGGACCAAACCAAAATAGCCACTGCCCTCA
CACACCACATCACAGTGAAGAAGGACGATAGAAGTAACAAGCAATTCCTTAACCAAACGA
AACCGTAACCCTAAGTCCTAACGCAATGGAACCCGAAGACGAGCAATCGAATTCAATGAT
GGAGGAGATCTGCTCGAACGGCGGCGAAGAATCGGCGCGTACCAGACCAATCATAAGCGG
GGAGCAGCTGGACGTCGAGGCTTACGCGAGCCTGTACCAAGGGAGGACGAAGATCACGCG
GCTAATGTTTATCGCCGATCACTGCGACATCGCTTCGATGCAGCTTGAGGCGCTTCGAAT
GGCCTACGATGAGATTAAGAAAGGCGAGAACACGCAACTTTTCAGAGAGGTTGTGAAGAA
GATTGATGGGAGGCTGGGCCCCAATTATGCCATGGACGAGGCTTGGTGCGATTCCGTGGA
TCGCAGAGCCGAACAGCGCAAGGAGAAACTTGAGAACGAACTCAATGCTTATAGGACAAA
TTTGATCAAAGAAAGTATAAGAATGGGATATAATGATTTTGGAGACTTTTACTATGCTCA
TGGTGCACTTGGGGATGCTTTTAAAAGTTATGTTCGCACTCGTGATTATTGCACTACATC
AAAGCATATTATTCATATGTGTATGAGTGCAATTCTGGTCAGCATTGAGATGGGTCAATT
TACTCATGTGACAAGCTATGTCAGCAAAGCAGAACAAACACCTGAGGCTCTTGAACCTGT
TACGATTGCAAAACTACGTTGTGCTGCAGGATTGGCTCATTTGGAGGCTAGAAAGTACAA
GCTTGCTGCTCGTAAGAGCAAAGTTATAGATAATGTCAACTTCCGAAATTTCTTAGAGCT
GGTTCCTGAAGTTAGGGAGCTTATTAACGATTTCTACTCTAGCCGTTATGCATCATGTCT
GGATTACCTTGGAAATCTTAAGGCAAACCTGTTGCTTGATATCCATTTGCACGACCATGT
TGAGACGTTGTATGATCAAATACGTAACAAAGCCCTCATCCAGTATACACACCCATTTGT
GTCTGTTGATTTGCACATGATGGCAAATGCTTTCAAAACAAGTGTTGCTGGGATAGAGAA
AGAGCTTGAAGCCTTGATTACTGACAACCAAATACAGGCTCGGATTGACTCACACAACAA
GATTTTGTATGCACGACATGCGGATCAAAGAAATGCAACTTTCCAACGGGTTTTACAGAC
TGGCAGTGAATTTGATCAGGATGTGAGGGCAATGTTACTGAGGGCAAATCTTCTGAAGCA
TGAATACAATGTTAGGGCTGCTAGGAAACTTTGAATAGGTAGATCTGCTTGCTTAGATTC
AATTTTACCTGCCGTTGTCTACTACTATTATTGAAGAAGAAGGGTTCTACGTTATTTTGA
AAGAAGATTGGTTGTCCATGGTTGATGGAATTTTGTGCATTTCAGAGTACATTGTGGTGA
TAATTGTTGTTGTATATGCTGAGATTTATTTGGAGAGTTCAATTATTCGTTTTTTTTTCC
CTCTCTCTCCCTCTAAAATCTGTATTGAATATGCTTAAGTTGAGATCAGATGAATATGTT
GATTCTTCTGAAAGAAAAATTTGACTGCTTCATTCAGTTTGTAATGTGAAATTATCCCAC
AGCATTAGGTAAACGAGTGAACGGTCAATGTGTAGTATGATGAATGCTGATGACCCAAAG
CGAAGAAACGAAGGGCTGACTAA