Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00297.1
CDS Infomation

gene=orange1.1t00297
Sequence

ATGGCGGATCCAGTTGTCCAGAGTCTCCATCAAACTGAACCCATAAAAGAAATCGCCATA
GATTACACCCCGGAAGCATGCACTCACTGCGCAGACTCCAATTCGATCACACTCACCTTC
GATCACCGCGGCGGAGCCAGGTGGCGCTCCACCACTCGCTTCCTCTACGGCACCTTCAGC
TCCCTGATCCAGTGCCCCAAAGGCAACACTAGTGGCCTCAACTTCAACATCTACCTTTCT
TCTCTAGAAGGCGACAAATCCCAAGACGAAATCGACTTTGAATTCCTTGGCAAGGACAAG
ACTATCGTTCAAACCAATTATTACACTACAGGAACCGGGAATAGAGAGGAGATTCATGAT
CTGGGGTTCGATTGTTCTGAAGGATTTCATGAGTACGTGATCAAGTGGGGTCCAGATTTG
ATCCAGTGGTTGATTGATGGGAAGGTGGTGAGGAGAGCTGAGAGGAACGAGGGTGAGGGG
TTTCCCAATAAACCAATGTTTTTGTATGCTTCAGTTTGGGATGCTAGCCACATTGATAAG
GCCAGGTGGTGTGGGCCCTACGTGGGCTGTGATGCACCTTATGTTTGCCTCTACAAAGAC
ATTCATGTGCCTGTTGCCACTGCGGTGGAGTGCCCTTGTGATTCTTGA

Peptide Sequence

PEP ID

orange1.1t00297.1
PEP Infomation
Sequence

MADPVVQSLHQTEPIKEIAIDYTPEACTHCADSNSITLTFDHRGGARWRSTTRFLYGTFS
SLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHD
LGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDK
ARWCGPYVGCDAPYVCLYKDIHVPVATAVECPCDS*

Transcript Sequence

Transcript ID

orange1.1t00297.1
Transcript Infomation

gene=orange1.1t00297 CDS=226-873
Sequence

AGGAAAAGTTTTCTTAATTAGTGAATAAGAAAGTTTTGAAATTCAAAAGGTTGTTCGTTA
TGATTAGATGGTGGATAGGCAAGGCCCGTGAATCGTTTTTAGAAATGCTTAGGAGCAGTG
GGCTCACTGTAAAAAGTCTGGTTTCTCCTTCAGTTGACTTCACTTTCTTTCTTCCGTAAA
TTGAAATCGGTAAGCAGCAATTCTGTCGTGACCCTTGAACTTGAAATGGCGGATCCAGTT
GTCCAGAGTCTCCATCAAACTGAACCCATAAAAGAAATCGCCATAGATTACACCCCGGAA
GCATGCACTCACTGCGCAGACTCCAATTCGATCACACTCACCTTCGATCACCGCGGCGGA
GCCAGGTGGCGCTCCACCACTCGCTTCCTCTACGGCACCTTCAGCTCCCTGATCCAGTGC
CCCAAAGGCAACACTAGTGGCCTCAACTTCAACATCTACCTTTCTTCTCTAGAAGGCGAC
AAATCCCAAGACGAAATCGACTTTGAATTCCTTGGCAAGGACAAGACTATCGTTCAAACC
AATTATTACACTACAGGAACCGGGAATAGAGAGGAGATTCATGATCTGGGGTTCGATTGT
TCTGAAGGATTTCATGAGTACGTGATCAAGTGGGGTCCAGATTTGATCCAGTGGTTGATT
GATGGGAAGGTGGTGAGGAGAGCTGAGAGGAACGAGGGTGAGGGGTTTCCCAATAAACCA
ATGTTTTTGTATGCTTCAGTTTGGGATGCTAGCCACATTGATAAGGCCAGGTGGTGTGGG
CCCTACGTGGGCTGTGATGCACCTTATGTTTGCCTCTACAAAGACATTCATGTGCCTGTT
GCCACTGCGGTGGAGTGCCCTTGTGATTCTTGATTTGGTGAGTGGCGTATTTGAGTTGTT
CTGATGTTTCTTGGGATTTTGTTCTTCCATTTACAATGTCTTTTCATCAATCGGATTTCA
CTGTGTGGTGGTTGGTTGCTGTTCCTACCAATTGTATCTTAGCAATTTCAGTCTGTTGTA
ATAAATTTTTGAATGGTGTAATCTGATTTGCTTTCTTGTTTAGTGATGTCACTGTCTCAG
GCTTCTTCTGTATGCTTGCTCTTGCCACTTTCTTGAAATATCTAAGCAATAAGATGTGAA
CTTGTGATTCTGATGGGT