Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00292.1
CDS Infomation

gene=orange1.1t00292
Sequence

ATGGAGCGTAGGCCCCGAATGCTTAAAGATTTTCTCATAGATAATGATTCCATTAATTCA
TGTTCTTCAAGTGGGTTCGAATCATTTCCTAGGAGACGCAGCAGCATACGAAGCCTTATT
CAAAACGATGTCAGCGATGTTGCAAGTAATAGCAGTAATAAGGCATCATTACTAAGAAGC
CGATCAAGAGCAGCTGCCTCAACAACAATCTCAGCTTTCCTAGCCATTATCAGCACCATC
AAGACCATCCAACTCAACAATGTGGTTAAGGTTAAGCCCCCTTCAATTTTACCACGAATT
AGCCTTTCACGCAAGCTTTCCTCAAAAAAGAAGAGCACTCCTACCAGAAAAGAAATAATT
ACTGATATCAAAATAACAGTCAGAGTCAAAGACATCATACGGTGGAAATCATTCCGCGAC
TTGGCAATGGACGATAAACCCCAGCCGCAGCCATCCGATCTTGCTTCCTCTCCTGATCAT
CAATGCACCACCACTACAACCACAATCGGATCCACCACCAATAGCACTCCGTCTCCATGC
AGTAGTAACGGTTCCAGTTGGTGTGAAAGTGATTTTACCTCGGACTATTATTATTTACCG
CCTTGGACCGGTAACTCTGCGGAAAACGACGCCCGCGGCCAAGTGGGTGAAAAATATTCA
CCGCGTGTCGGCAGCGATTGCGATTCGATGAAAGCGACAATTGAGTCAGCGGAGGGACCC
GAGGAGTTGCATGGCGAGGAGAAAGAACAACTTAGTCCAGTTTCAGTGCTGGATTTCGAG
CTCCAAGAAGATGATGAAGATCATTCAGTCTCGTCTTTCGATCAAAGTCTTGCAAACCTA
GAAAAATGGATGTCAATGGAAGAGAATGACGGAGATGATAGCTCTGCCGAGGAGGAGGAG
GAAGAAGAAGAAGAAGAAATCAATATTGAAGTTGAAGAAAAGGCAAAGCTGCTGTTGAAT
AAAATAAAATCAACAATAAGTCCAACGTGGAATTGTGAAGACAGTAGAATTGTATCGGAA
CAACTATTGTTGGATTTCTTGGTAGAGGAATTGTCTGCAAAGAGAAATAACCAAGGTAGA
ATTAATGAGATAGTAAGGCAAGCGGAGGCGTGGATTAAAGGGGAAGACAGTGCCACGACA
TTATTAATTGATGATGCTGGGGATTGTATTCGAGATATGGATAGGAAAGAGAGTTGGAAC
AAATTTGAGGGTGAGCAAGAAGAGGTATCAATGCAAATCGAGAACACTTTGTTGAATCTT
TTGCTAGATGACCTACTGCTTGATCTCTAG

Peptide Sequence

PEP ID

orange1.1t00292.1
PEP Infomation
Sequence

MERRPRMLKDFLIDNDSINSCSSSGFESFPRRRSSIRSLIQNDVSDVASNSSNKASLLRS
RSRAAASTTISAFLAIISTIKTIQLNNVVKVKPPSILPRISLSRKLSSKKKSTPTRKEII
TDIKITVRVKDIIRWKSFRDLAMDDKPQPQPSDLASSPDHQCTTTTTTIGSTTNSTPSPC
SSNGSSWCESDFTSDYYYLPPWTGNSAENDARGQVGEKYSPRVGSDCDSMKATIESAEGP
EELHGEEKEQLSPVSVLDFELQEDDEDHSVSSFDQSLANLEKWMSMEENDGDDSSAEEEE
EEEEEEINIEVEEKAKLLLNKIKSTISPTWNCEDSRIVSEQLLLDFLVEELSAKRNNQGR
INEIVRQAEAWIKGEDSATTLLIDDAGDCIRDMDRKESWNKFEGEQEEVSMQIENTLLNL
LLDDLLLDL*

Transcript Sequence

Transcript ID

orange1.1t00292.1
Transcript Infomation

gene=orange1.1t00292 CDS=212-1501
Sequence

TTCTTATATAGTTCTTACCTGGAGATCTCAACCTAGAACTGCCAGAAGCTACCTCTCTCT
TTCTCATTGTCCTTCTTCAATTCTTCCTTTATATTCGAGATTTAACCACCCTCTCACTGC
TTACTACTTCACTCTCTGAAGTCTTACACAAAATCCTTTTGCTTTTGCTTAATTAACCAT
CATCAGGTCATCTTCGAGAAAGCAATTTTCAATGGAGCGTAGGCCCCGAATGCTTAAAGA
TTTTCTCATAGATAATGATTCCATTAATTCATGTTCTTCAAGTGGGTTCGAATCATTTCC
TAGGAGACGCAGCAGCATACGAAGCCTTATTCAAAACGATGTCAGCGATGTTGCAAGTAA
TAGCAGTAATAAGGCATCATTACTAAGAAGCCGATCAAGAGCAGCTGCCTCAACAACAAT
CTCAGCTTTCCTAGCCATTATCAGCACCATCAAGACCATCCAACTCAACAATGTGGTTAA
GGTTAAGCCCCCTTCAATTTTACCACGAATTAGCCTTTCACGCAAGCTTTCCTCAAAAAA
GAAGAGCACTCCTACCAGAAAAGAAATAATTACTGATATCAAAATAACAGTCAGAGTCAA
AGACATCATACGGTGGAAATCATTCCGCGACTTGGCAATGGACGATAAACCCCAGCCGCA
GCCATCCGATCTTGCTTCCTCTCCTGATCATCAATGCACCACCACTACAACCACAATCGG
ATCCACCACCAATAGCACTCCGTCTCCATGCAGTAGTAACGGTTCCAGTTGGTGTGAAAG
TGATTTTACCTCGGACTATTATTATTTACCGCCTTGGACCGGTAACTCTGCGGAAAACGA
CGCCCGCGGCCAAGTGGGTGAAAAATATTCACCGCGTGTCGGCAGCGATTGCGATTCGAT
GAAAGCGACAATTGAGTCAGCGGAGGGACCCGAGGAGTTGCATGGCGAGGAGAAAGAACA
ACTTAGTCCAGTTTCAGTGCTGGATTTCGAGCTCCAAGAAGATGATGAAGATCATTCAGT
CTCGTCTTTCGATCAAAGTCTTGCAAACCTAGAAAAATGGATGTCAATGGAAGAGAATGA
CGGAGATGATAGCTCTGCCGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAATCAATATTGA
AGTTGAAGAAAAGGCAAAGCTGCTGTTGAATAAAATAAAATCAACAATAAGTCCAACGTG
GAATTGTGAAGACAGTAGAATTGTATCGGAACAACTATTGTTGGATTTCTTGGTAGAGGA
ATTGTCTGCAAAGAGAAATAACCAAGGTAGAATTAATGAGATAGTAAGGCAAGCGGAGGC
GTGGATTAAAGGGGAAGACAGTGCCACGACATTATTAATTGATGATGCTGGGGATTGTAT
TCGAGATATGGATAGGAAAGAGAGTTGGAACAAATTTGAGGGTGAGCAAGAAGAGGTATC
AATGCAAATCGAGAACACTTTGTTGAATCTTTTGCTAGATGACCTACTGCTTGATCTCTA
GACTCTAATTCATGTCCTGAGGCACACAACTCGTGCCAAAGGTCAATTACCCTTAGAACA
TCGATGCTGCAGTTGTAGTTTTGTACAAGAACAAAATGAAACAACTATTCATTTATTATT
TTTTTCGCTTGATATATATTATTTCCTTTTAGAAAGAAAGAATTTTACA