Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00285.3
CDS Infomation

gene=orange1.1t00285
Sequence

ATGACGGAGGAGGATCAAGATCAAGATCAAGAATTAGAAATTCCAGAGGGCAGTGTACGG
AATATACTAGAACAAGATAGTCTCAAGTGGGTCTTCGTCGGAGGCAAAGGCGGCGTTGGC
AAAACGACATGTAGTTCAATTCTCTCGATCCTTTTGGCTGAGGTCCGACCTTCTGTCTTG
ATCATATCCACTGACCCAGCTCACAATCTCAGCGATGCTTTTCAGCAACGCTTCACCAAA
ACACCTACTTTAGTCAATGGTTTCTCCAATCTTTATGCCATGGAGGTGGATCCTAGTGTC
GAAGAAGAAACGGGTTCTACCGAGGGAATGGATAGCTTGTTTTCTGAGCTAGCAAATGCT
ATTCCCGGTATTGATGAGGCAATGAGCTTTGCGGAGATGCTCAAATTGGTGCAAACAATG
GATTATTCTTGTATAGTATTTGATACAGCTCCAACTGGCCATACACTCCGGCTATTACAA
TTTCCTTCAACCTTAGAGAAGGGGCTAGACAAAATGATGTCCTTGAAAAATAAATTTGGC
GGCATGATTAATCAGATGACCCGTCTCTTTGGAATTGATGATGAATTTGGGGAGGATGCT
CTCTTAGGAAGGCTTGAGGGCATGAAAGATGTGATTGAACGAGTTAATAAGCAGTTCAAG
GACCCAGACTTGACAACCTTTGTCTGTGTTTGCATTCCAGAGTTCCTCTCTCTCTATGAA
ACTGAGCGACTTGTGCAGGAGCTAACCAAGTTTGAGATTGATACACATAATATTATTATT
AACCAAGTACTTTATGATGATGAAGGTGAGCATCCTGCCTCTATTTGCCCTTCTGATATT
CTTGTTCAGACAATAAGTTTGACCATCAATAGGCATGCATTGTAA

Peptide Sequence

PEP ID

orange1.1t00285.3
PEP Infomation
Sequence

MTEEDQDQDQELEIPEGSVRNILEQDSLKWVFVGGKGGVGKTTCSSILSILLAEVRPSVL
IISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETGSTEGMDSLFSELANA
IPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFG
GMINQMTRLFGIDDEFGEDALLGRLEGMKDVIERVNKQFKDPDLTTFVCVCIPEFLSLYE
TERLVQELTKFEIDTHNIIINQVLYDDEGEHPASICPSDILVQTISLTINRHAL*

Transcript Sequence

Transcript ID

orange1.1t00285.3
Transcript Infomation

gene=orange1.1t00285 CDS=296-1180
Sequence

TAAGTTGATATAAACGGGTCTCAATAATTTATACAGTGTAAATAGCAGCCTTAAAAAAAA
AATTGTTAGTCGAATCGTGCGTGCCAGGCAGCCATAGCGTTAGGCAGCAACCAAGGCCGT
ATGGAGGGACGGACAAAAGTGATGTCATCAGTTGCAGCTGAAGTGCTGGATTTGTAGGAG
AACTCGTGCCCGTCTCAAAGGCTTAATAAGAAGAGAAGAAAGCGGAAGCAAAGAAAGAAA
CAGAGAACAAGAGGCAGTGAGTGAGTTGAAAAAGAGGGAAAAAAGAAAAGAAAAGATGAC
GGAGGAGGATCAAGATCAAGATCAAGAATTAGAAATTCCAGAGGGCAGTGTACGGAATAT
ACTAGAACAAGATAGTCTCAAGTGGGTCTTCGTCGGAGGCAAAGGCGGCGTTGGCAAAAC
GACATGTAGTTCAATTCTCTCGATCCTTTTGGCTGAGGTCCGACCTTCTGTCTTGATCAT
ATCCACTGACCCAGCTCACAATCTCAGCGATGCTTTTCAGCAACGCTTCACCAAAACACC
TACTTTAGTCAATGGTTTCTCCAATCTTTATGCCATGGAGGTGGATCCTAGTGTCGAAGA
AGAAACGGGTTCTACCGAGGGAATGGATAGCTTGTTTTCTGAGCTAGCAAATGCTATTCC
CGGTATTGATGAGGCAATGAGCTTTGCGGAGATGCTCAAATTGGTGCAAACAATGGATTA
TTCTTGTATAGTATTTGATACAGCTCCAACTGGCCATACACTCCGGCTATTACAATTTCC
TTCAACCTTAGAGAAGGGGCTAGACAAAATGATGTCCTTGAAAAATAAATTTGGCGGCAT
GATTAATCAGATGACCCGTCTCTTTGGAATTGATGATGAATTTGGGGAGGATGCTCTCTT
AGGAAGGCTTGAGGGCATGAAAGATGTGATTGAACGAGTTAATAAGCAGTTCAAGGACCC
AGACTTGACAACCTTTGTCTGTGTTTGCATTCCAGAGTTCCTCTCTCTCTATGAAACTGA
GCGACTTGTGCAGGAGCTAACCAAGTTTGAGATTGATACACATAATATTATTATTAACCA
AGTACTTTATGATGATGAAGGTGAGCATCCTGCCTCTATTTGCCCTTCTGATATTCTTGT
TCAGACAATAAGTTTGACCATCAATAGGCATGCATTGTAATTGTAGATGTTGAATCGAAG
TTGCTCAGAGCTAGAATGCGAATGCAACAAAAGTACCTCGATCAGTTCTACATGTTGTAT
GATGACTTTCACATCACCAAGTTGCCTTTGCTGCCAGAAGAGGTAACTGGGATTGAAGCT
CTGAAAGCTTTTTCACAACATTTTGTTACGCCATATCAACCTTCAACCAGTAGAGATACG
GTGGAAGATCTGGAGCGGAGAGTGTCCACTCTAAGGCAGCAGTTGCAAGAAGCAGAAGCA
GAGTTAGAGAGACTAAGAAAAGGAAAACAGGTGGCCTAACGATACTTTGCTCGCAATTAC
AGCCTTGGCTTCTTTTTATTTCACCTGCTGACAACAGAGGGCATCCTGTTTCATTGGGCC
GCCATGGGAATTCATTCTTCTATATTACTGCAGGATAATGTTTCATAACAAATTTATTTC
ATGAATACTTTACTTTTATACCTTTTAAATCATTACATGAGATTATTCTTTTCCTTGTCG
AACCATCTGAAGGGTTTTCTTTTGCTGTTTTAGTCATTACACTTGAACTGAAACGATCTC
TGTCATTTCAGTTCTAAGCTTACCATTTTCTTTAACACTAAAGATTATATGCTGATTTAG
ATATCCTTGTTATGCTTGTATTTAACCGAGTTGTACTGCGGTGAAGACGGCAAACGGTAG
AGCCGTCATTTGCAAATTGTTACAAATTCACAGTACATTTACCATTACACTACAACAATT
GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGG
GTTCAAATCCCACTCTCAACACAACATTTTAGTACTATTTTGTTATTATTTTATAAAATA
AATTGGGATTGGGGATATTCAGCATAAGGATTT