Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00247.1
CDS Infomation

gene=orange1.1t00247
Sequence

ATGGCGCCCTGTGATTGCAACATGTTGCCCCGTTCGTACTCAGCTTACCAAGTGTTCGAC
GAAATTACAGCTCCAAAACCCGGACTCCGCCTGTCTTGGAGAAACTTATCATTACATCGA
AAACCAGCGAAATGGTCTCGAAGCTTGCGTTCTGGGCCGGCGTTGGAAGCAATTAAAGCA
GAAGATATGGGAAAAACTCAAGTGAAAGACGATACATCAATGTTTACGTGGATTCAAATT
GGTCCCAACATTACAGAGGAACAAAAGCAGGCAATATCTCAATTCCCACGAAAGATGACC
AAGAGATGCAAGGCATTTGTCAAGCAGATTATTTGCGTTTCTCCTGAAACGGGAAATTTA
TCTGATTTGTTGGCTGCTTGGGTGAGGTTTATGAAGCCTAGGAGAGCCGATTGGCTTGCG
GTTCTTAAACAATTGAAATTAATGGAACATCCCCTGTATCTCCAGGTGGCAGAACTTGCT
CTACTAGAAGAATCTTTTGAAGCTAATATCCGTGACTATACCAAGATAATCCATGGTTAT
GGGAAAAAAATGCAGATTCAAAATGCTGAAAACACTCTCTTAGCAATGAAGAGAAGAGGC
TTCATCTGTGACCAGGTAACCTTAACCGTCATGGTTGTTATGTACAGCAAGGCAGGCAAT
CTTAAGATGGCAGAAGAAACTTTTGAAGAAATCAAGCTGCTTGGTGAACCATTAGATAAA
AGATCGTATGGATCCATGGTCATGGCCTACGTAAGAGCTGGAATGCTTGACAGAGGAGAG
GTTCTACTTAGAGAAATGGATGCCCAAGAAGTTTATGTAGGAAGTGAAGTTTACAAGGCA
TTGTTAAGAGGATATTCCATGAATGGCAATTCTGAAGGAGCTCAAAGGGTGTTTGAAGCA
ATCCAGTTTGCAGGTATTACTCCGGATGCTAGGATGTGTGCGCTACTTATAAATGCCTAC
CAAATGGCAGGTCAAAGTCAAAAGGCATATACTGCATTCCAGAATATGAGGAAAGCTGGA
CTTGAACCTAGTGATAAATGTGTAGCTTTAATATTATCTGCATGTGAAAAAGAAAACCAG
CTTAACAGAGCCTTGGAGTTCCTGATAGATTTAGAGAGAGATGGATTCATGGTTGGGAAA
GAAGCTTCATGTACATTGGCTGCATGGTTCAAACGATTAGGTGTCGTGGAAGAAGTGGAG
CATGTGCTGAGAGAATATGGTTTGAGAGAAACCTATAGCAAAATTCCTGGCTCTCGGTCA
ATTGCCTTGTAA

Peptide Sequence

PEP ID

orange1.1t00247.1
PEP Infomation
Sequence

MAPCDCNMLPRSYSAYQVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPALEAIKA
EDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNL
SDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGY
GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK
RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA
IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ
LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS
IAL*

Transcript Sequence

Transcript ID

orange1.1t00247.1
Transcript Infomation

gene=orange1.1t00247 CDS=216-1487
Sequence

TATTGATATTGAGAGAGTAGATGAGAGCGGGAAAAGTACACTTATTATCAATTATTTTTT
AATCTCATAATGAGGCAAGTAAATGAATTAACCGAAAATTAGGGTCCTGTGAGATAAATT
GTCAAATACCGCTCTTTAGGAAAGCAACTCTCTGTCAGTTACTGGATGGCGTGGACCGTG
TGAGGGAAATTGGCATCTTCTTACTTCAGTCGAGCATGGCGCCCTGTGATTGCAACATGT
TGCCCCGTTCGTACTCAGCTTACCAAGTGTTCGACGAAATTACAGCTCCAAAACCCGGAC
TCCGCCTGTCTTGGAGAAACTTATCATTACATCGAAAACCAGCGAAATGGTCTCGAAGCT
TGCGTTCTGGGCCGGCGTTGGAAGCAATTAAAGCAGAAGATATGGGAAAAACTCAAGTGA
AAGACGATACATCAATGTTTACGTGGATTCAAATTGGTCCCAACATTACAGAGGAACAAA
AGCAGGCAATATCTCAATTCCCACGAAAGATGACCAAGAGATGCAAGGCATTTGTCAAGC
AGATTATTTGCGTTTCTCCTGAAACGGGAAATTTATCTGATTTGTTGGCTGCTTGGGTGA
GGTTTATGAAGCCTAGGAGAGCCGATTGGCTTGCGGTTCTTAAACAATTGAAATTAATGG
AACATCCCCTGTATCTCCAGGTGGCAGAACTTGCTCTACTAGAAGAATCTTTTGAAGCTA
ATATCCGTGACTATACCAAGATAATCCATGGTTATGGGAAAAAAATGCAGATTCAAAATG
CTGAAAACACTCTCTTAGCAATGAAGAGAAGAGGCTTCATCTGTGACCAGGTAACCTTAA
CCGTCATGGTTGTTATGTACAGCAAGGCAGGCAATCTTAAGATGGCAGAAGAAACTTTTG
AAGAAATCAAGCTGCTTGGTGAACCATTAGATAAAAGATCGTATGGATCCATGGTCATGG
CCTACGTAAGAGCTGGAATGCTTGACAGAGGAGAGGTTCTACTTAGAGAAATGGATGCCC
AAGAAGTTTATGTAGGAAGTGAAGTTTACAAGGCATTGTTAAGAGGATATTCCATGAATG
GCAATTCTGAAGGAGCTCAAAGGGTGTTTGAAGCAATCCAGTTTGCAGGTATTACTCCGG
ATGCTAGGATGTGTGCGCTACTTATAAATGCCTACCAAATGGCAGGTCAAAGTCAAAAGG
CATATACTGCATTCCAGAATATGAGGAAAGCTGGACTTGAACCTAGTGATAAATGTGTAG
CTTTAATATTATCTGCATGTGAAAAAGAAAACCAGCTTAACAGAGCCTTGGAGTTCCTGA
TAGATTTAGAGAGAGATGGATTCATGGTTGGGAAAGAAGCTTCATGTACATTGGCTGCAT
GGTTCAAACGATTAGGTGTCGTGGAAGAAGTGGAGCATGTGCTGAGAGAATATGGTTTGA
GAGAAACCTATAGCAAAATTCCTGGCTCTCGGTCAATTGCCTTGTAACACTTATGGAAAC
ATCTGCGCTTGTCGTGTTCATATCCTCCATGGTTGCTTAAAGCAATTCCATTTGAAGTTC
ATAATTAATTTTAGGAGGAACTTATGTAAGCAGGA