Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00239.6
CDS Infomation

gene=orange1.1t00239
Sequence

ATGTTTCATTTGAGTCTGTTGAGGAATGATATTGCTAGATCAGATGCTGCTTATTCTCAC
TTGTGCAGTGCCTTAACTTTAGTAGTTCTCGATGCAATTGTTGTCGGGGTAGATATGCTA
ATAAAGAAGTATGGAGAAACATATAAAGGAAAGAAGCATCTCTGTCTGATAACAGATGCA
CTATGTCCTCTTAAAGATCCAGATGTGGGAACCAAAGAAGATCAAGTCAGCACCATTGCC
AGACAAATGGTTGCTTTCGGCTTGAGAATGAAAAATATTGTTGTGCGAGCAAGTTTAAGT
GGAGAACCGCATATGAGAGTAATAATTGAGAATGATAATCTATTGAATATTTTTTCAAAG
AAATCGAGCGCAAAGACATTGTTTGTTGATAGTACAACTTCATTACGAGGTGCACGTAAA
ACTCGAGATATATCTCCTGTCACAATATTCAGAGGTGACCTTGAACTCAGCGAAAAAATG
AAGATTAAGGTATGGGTTTACAAAAAGACGGGAGAGGAGAAGTTTCCCACCCTGAAGAAA
TATTCTGATAAAGCACCTTCAACTGATAAATTTGCCACACATGAAGTCAAGGTGGATTAC
GAATACAAAAGTGTTGAAGATCCTAGTAAAGTTGTACCCCCTGAGCAAAGAATTAAAGGT
TATCGCTATGGACCTCAAGTAGTTCCTATATCTTCCGCTGAATGGGAGGCTGTCAAGTTC
AAACCAGAAAAGAGTGTGAAGCTTCTTGGATTTACTGATGCTTCAAACATATTGCGACAC
TATTACATGAAAGATGTCAACCTTTTTATTGCCGAACCGGGCAATTCGAGGGCAACAGTT
GCAGTTTCTGCCTTAGCCAGAGCAATGAAGGAAATGAACAAGGTTGCAATTGTGCGCTGT
GTGTGGAGACAAGGACAGCAGAGTGTTGTTGTTGGTGTCTTGACCCCCAATGTGTCTGAA
AAAATAAATATTCCTGATTCATTCTACTTCAATGTACTCCCGTTTGCTGAGGATGTTCGA
GAATTTCAATTCCCCTCTTTCAGCAAATTTCCTGTGTCTTGGCAGCCAAATGAGCAACAG
CAGGAAGCAGCAGATAACCTGGTTAAAATGCTTGACCTTGCACCATCTGGCAAAGGGGAA
ATTTTGCAGCCGGAATTGACACCAAATCCTGCCCTGGAGCGTTTCTATCATCATCTTGAG
TTGAAATCAGAGCACCAAGATGCTGCTCCACCTCCACTTGATGATAGTCTTAAGAAGATT
ACTGAGCCTGATCCCACACTTCTTGCTGAAAGCCAGTCTGCTATTGATGCATTTTGTGGG
CAATTTGTAATCAAGGAGAATCCTAAGCTGAAGAAATCAACTAGGCGATTCCTACGAGAG
AAACCATCTGGCTCAGATGAGCCAAATGGTGATGGCAGTGTATCTGATGCTCAAGCTGTC
AATTCCATGGAAAGCAAACCTGTAGTTACAGTTGACAAAATTGGCGATTTGACCCCTATC
CAAGATTTTGAAGCAATGATGTCTAGAAGAGATTGCCCCGATTGGGTTGATAAAGCAATT
GAGGATATGAAAAATAAAATATTTGGCCTACTGGAAAACTCCAATGAAGGGATTAATTAT
CCTAAAGCAGTGGAACTTTTAGTCGCTTTACGTAAGGGATGCATCCTCGAGCAAGTATAT
CTCTCTGTCTCTTTCTTTCTCCTGTGGTTTGCTTTTGCCTTTTGGGATAATTCTTGCCTT
AATGATATGTCGTCTATAGTCACTTTTAGTTATGCTTCTTGA

Peptide Sequence

PEP ID

orange1.1t00239.6
PEP Infomation
Sequence

MFHLSLLRNDIARSDAAYSHLCSALTLVVLDAIVVGVDMLIKKYGETYKGKKHLCLITDA
LCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK
KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK
YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF
KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC
VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ
QEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI
TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV
NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY
PKAVELLVALRKGCILEQVYLSVSFFLLWFAFAFWDNSCLNDMSSIVTFSYAS*

Transcript Sequence

Transcript ID

orange1.1t00239.6
Transcript Infomation

gene=orange1.1t00239 CDS=179-1960
Sequence

TGTGTAAATATATAGCTATCTACAAATATTCTTATATGTTATGTAAACAAATTTGATCCC
CATGCTCAAAAAAAGCATAGGACCTTTTCTATGGAGTATATTTTCTTCTTTAAATTTACA
TTTTTAACATTGATGAAGATCACATGTTACATTATGATATTCTCTCTATTTTGTTTATAT
GTTTCATTTGAGTCTGTTGAGGAATGATATTGCTAGATCAGATGCTGCTTATTCTCACTT
GTGCAGTGCCTTAACTTTAGTAGTTCTCGATGCAATTGTTGTCGGGGTAGATATGCTAAT
AAAGAAGTATGGAGAAACATATAAAGGAAAGAAGCATCTCTGTCTGATAACAGATGCACT
ATGTCCTCTTAAAGATCCAGATGTGGGAACCAAAGAAGATCAAGTCAGCACCATTGCCAG
ACAAATGGTTGCTTTCGGCTTGAGAATGAAAAATATTGTTGTGCGAGCAAGTTTAAGTGG
AGAACCGCATATGAGAGTAATAATTGAGAATGATAATCTATTGAATATTTTTTCAAAGAA
ATCGAGCGCAAAGACATTGTTTGTTGATAGTACAACTTCATTACGAGGTGCACGTAAAAC
TCGAGATATATCTCCTGTCACAATATTCAGAGGTGACCTTGAACTCAGCGAAAAAATGAA
GATTAAGGTATGGGTTTACAAAAAGACGGGAGAGGAGAAGTTTCCCACCCTGAAGAAATA
TTCTGATAAAGCACCTTCAACTGATAAATTTGCCACACATGAAGTCAAGGTGGATTACGA
ATACAAAAGTGTTGAAGATCCTAGTAAAGTTGTACCCCCTGAGCAAAGAATTAAAGGTTA
TCGCTATGGACCTCAAGTAGTTCCTATATCTTCCGCTGAATGGGAGGCTGTCAAGTTCAA
ACCAGAAAAGAGTGTGAAGCTTCTTGGATTTACTGATGCTTCAAACATATTGCGACACTA
TTACATGAAAGATGTCAACCTTTTTATTGCCGAACCGGGCAATTCGAGGGCAACAGTTGC
AGTTTCTGCCTTAGCCAGAGCAATGAAGGAAATGAACAAGGTTGCAATTGTGCGCTGTGT
GTGGAGACAAGGACAGCAGAGTGTTGTTGTTGGTGTCTTGACCCCCAATGTGTCTGAAAA
AATAAATATTCCTGATTCATTCTACTTCAATGTACTCCCGTTTGCTGAGGATGTTCGAGA
ATTTCAATTCCCCTCTTTCAGCAAATTTCCTGTGTCTTGGCAGCCAAATGAGCAACAGCA
GGAAGCAGCAGATAACCTGGTTAAAATGCTTGACCTTGCACCATCTGGCAAAGGGGAAAT
TTTGCAGCCGGAATTGACACCAAATCCTGCCCTGGAGCGTTTCTATCATCATCTTGAGTT
GAAATCAGAGCACCAAGATGCTGCTCCACCTCCACTTGATGATAGTCTTAAGAAGATTAC
TGAGCCTGATCCCACACTTCTTGCTGAAAGCCAGTCTGCTATTGATGCATTTTGTGGGCA
ATTTGTAATCAAGGAGAATCCTAAGCTGAAGAAATCAACTAGGCGATTCCTACGAGAGAA
ACCATCTGGCTCAGATGAGCCAAATGGTGATGGCAGTGTATCTGATGCTCAAGCTGTCAA
TTCCATGGAAAGCAAACCTGTAGTTACAGTTGACAAAATTGGCGATTTGACCCCTATCCA
AGATTTTGAAGCAATGATGTCTAGAAGAGATTGCCCCGATTGGGTTGATAAAGCAATTGA
GGATATGAAAAATAAAATATTTGGCCTACTGGAAAACTCCAATGAAGGGATTAATTATCC
TAAAGCAGTGGAACTTTTAGTCGCTTTACGTAAGGGATGCATCCTCGAGCAAGTATATCT
CTCTGTCTCTTTCTTTCTCCTGTGGTTTGCTTTTGCCTTTTGGGATAATTCTTGCCTTAA
TGATATGTCGTCTATAGTCACTTTTAGTTATGCTTCTTGAAATTATTGACA