Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00238.1
CDS Infomation

gene=orange1.1t00238
Sequence

ATGGACGCAGACACCAACAACGATGATCAGATAGATATTGGTATTAATTCGTCGTCGTCT
TCAAAGCTTGTATTATACTCGTACTGGCAGAGCTCTTGCTCTTGGCGGGTCCGCTTCGCT
TTGAAACTTAAAGGTCTTATCTATGAATACAAAGCCGTGGACCTTTCAAAAGGGGAACAA
TTTAGTCCCGAGTTCGAGGAATTAAATCCTCTGCATTTCGTTCCGGTGTTAGTTGATGGT
GATGTCGTGGTCTCAGATTCCTATGCAATCTTGTTGTATTTGGAGGAAAAGTATCCTCAA
AGAGCTCTCTTACCTGCTGCTGATCCACAGCAAAGAGCTTTGAATCTCCAGGCTGCCAGT
ATAATCAGCTCTAGCATGCAGCCTCTTCATATGCTATCATTGCTGAAATATATTGAGGAT
AAGTTTGGTCCCGATGAGCGACTTTTATGGGTTCAGACTCACATAGAAAAAGGTTTCCTA
GCTCTTGAGAAGTTGCTGATAGATTTTGCTGCCAAGTATGCCACAGGAGAAGATGTGTAC
ATGGCTGATGTGTTTTTGGCCCCACAAATTGCTGTTGTTACTATGAGGTTTAACATTGAC
ATGTCCAAGTTTCCAACTTTACTCAGGATATATGAGTCATATAAAGGCTTACCAGAATTC
CTAGCCTCATCACCAGAGAGACAGCCAGATGCAGCGCGTTAA

Peptide Sequence

PEP ID

orange1.1t00238.1
PEP Infomation
Sequence

MDADTNNDDQIDIGINSSSSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQ
FSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAADPQQRALNLQAAS
IISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVY
MADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQPDAAR*

Transcript Sequence

Transcript ID

orange1.1t00238.1
Transcript Infomation

gene=orange1.1t00238 CDS=271-972
Sequence

TCGAGCGGATAAATGAATACCATTTTCAAATCTCAATGAAAAACGAACAACATCTGTTTG
TTCAGAGAATTTTCTTGAATTGAATGAAATTCGACTTTGTCTGAAAAGTATATACAGTAT
TTGCAATGTCCACCCAAAACCGAAAGGTGTTGCAAAGTGATTAGAAAACAAGAAAAAGTA
AATATGGAATATAAATAAAAGGGTGCCGGTAAGTGGTCAGAGACCGATCGAGTTAACTAA
AGAGGAACTGTTCGGTTAATCATCAATATAATGGACGCAGACACCAACAACGATGATCAG
ATAGATATTGGTATTAATTCGTCGTCGTCTTCAAAGCTTGTATTATACTCGTACTGGCAG
AGCTCTTGCTCTTGGCGGGTCCGCTTCGCTTTGAAACTTAAAGGTCTTATCTATGAATAC
AAAGCCGTGGACCTTTCAAAAGGGGAACAATTTAGTCCCGAGTTCGAGGAATTAAATCCT
CTGCATTTCGTTCCGGTGTTAGTTGATGGTGATGTCGTGGTCTCAGATTCCTATGCAATC
TTGTTGTATTTGGAGGAAAAGTATCCTCAAAGAGCTCTCTTACCTGCTGCTGATCCACAG
CAAAGAGCTTTGAATCTCCAGGCTGCCAGTATAATCAGCTCTAGCATGCAGCCTCTTCAT
ATGCTATCATTGCTGAAATATATTGAGGATAAGTTTGGTCCCGATGAGCGACTTTTATGG
GTTCAGACTCACATAGAAAAAGGTTTCCTAGCTCTTGAGAAGTTGCTGATAGATTTTGCT
GCCAAGTATGCCACAGGAGAAGATGTGTACATGGCTGATGTGTTTTTGGCCCCACAAATT
GCTGTTGTTACTATGAGGTTTAACATTGACATGTCCAAGTTTCCAACTTTACTCAGGATA
TATGAGTCATATAAAGGCTTACCAGAATTCCTAGCCTCATCACCAGAGAGACAGCCAGAT
GCAGCGCGTTAAGTTTGGTTTTCTTTGTCCGTATTTTTACTTCAGTTCAGTACTGGCTTA
TCTTGTTAATAACACAATTTCAGTACCAATATCTCTTCGGTATGTTGTTTTCAGCTTATT
ATTGTCAATACCACACTATCTTCTGGCTGGAAGCATGCGTATATTGTTATTACTCAAAAG
TTACTCTCAAGCAGTCATTTTCTAATTTGTACAGATTGTCGGACCAGAAAAGAGATGAAT
TCTCTCGACCAAGGAAGTTTTTTTAATTTTTAATGATAGACAAGTAGAGGAGAGGTACAG
CTCGAGTAACTTAAGTTGAAGAATAAATCTTGTGTGCCCTGAGATCTAAGCTTTGTCCTT
CTGTTCGCTTGGCTTCTACTAAGTAAAGGCAGTCTCTGTATCTCTCAACTTTCGATTACT
CAATTACTTTACACTCCCATTATAAATTCTATTGCTATTCATTGTATTGGTTCGGTCTCA
TCTCACTCCTTACTCAGGTTTTTGTACAACAGTGTTGCCCTACCTTAATTAAAGAAAGTA
ACACGACTTCGTTCTTCACGCACACTTCTTCATCTTCTTGTTATGGTATTGTAGTTCCTC
TGCCATACGCGTTGATTTAGCTTAGCTGGTCTCAGAAAATAAACAAATTCAAGATTCAAA
CCAAAGTTGGAGAGAACGAACGTTCTTTGAAATATTGAGCTGGAGTCTGTAGAGGATGAT
TTCAATTCTACAATTGGATCCATGGATGGCTCTCGATACAACAAACAGAATGGGGCCGCC
GCTAAAAAGTACACAGCTCCATCTTGTTATGCAGCGCCATACACTCATTTGGGCTGAGAT
TTTGGTCCTCAGCATTCCATCCTTTCTCGGCCCTTCATCGCAGGACAATGGACAATGCTT
TGTTATCCACTTCCACCGTGCACTGTGATTACGTACATTCATGGAACCAGCTTATCCTAG
CCTGATTAGTCTCCACCT