Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00233.2
CDS Infomation

gene=orange1.1t00233
Sequence

ATGCAGAGGGGAAGAGAAGATAGAAATGATTTGTTTGGTACGGGTGACCCATTTAGTATT
TTTCGCGGTTTTGGATCCCTCAGGAGTATGATGCCTACCCCATTTGGGGGCGGGGCTCCA
TTTGATGATCTGTTCTTTACTCGTCCATTTGGCAGCAAAGAGCCTATAACACCAAACAAT
AATGAGAAGGGATTAGTGATAGAAGAATTAAATTCTGATCATGAAGGAGAAATGGAAGAA
CTAAATTCTGGGGACCATGAAATGCATTCTGGGTCAAGCAAAGAGCCTTCTGTTGAGCAT
CCAGATGATGATGTAGAAGAAGGGAAGAATGATGATGTGAATTATAAGACTCATCAGAGC
AAGGTACAAGGGACTCAGCCACAGGCTCGTGGTTTTAGTTTTCAGACTTGCAAAGTAACA
TATGGCGGTGTTGATGGAGCGTACTATACTTCTTCAAGAACAAGGAGGACTGGCAATGAT
GGTGTGGTGCTTGAGGAGAGCAAAGAAGCAGATAGAACAACTGGTCAAGCAACACATAGG
ATTTCAAGAGGAATTAATGACAAGGGTCATTCATTTACAAAGAAGCTTAATTCGGATGGT
AAAGTGGATGCACTTCAAACTCTGCATAATTTAAATGAAGATGAGCTTGCTGGTTTTGAA
GAAGCATGGAAGGGGAATGCAAATAAGCATTATTGGAGTGAAGGATTTGATATGAATCGT
AACGCAGGTTCTAGCCAAGAACAAAAGGGAAGGTCAGCTTATGGTGGTTGGGCACTTCCA
TCTTCAGAGAAAACCCGAAACGCTGGAGTCACAACATCATATAATGAAGCCATGGCTAGT
GATTCAGGGGGGAGAGCAAAAAAGGTTGTTAGAATTAATATAGAATGA

Peptide Sequence

PEP ID

orange1.1t00233.2
PEP Infomation
Sequence

MQRGREDRNDLFGTGDPFSIFRGFGSLRSMMPTPFGGGAPFDDLFFTRPFGSKEPITPNN
NEKGLVIEELNSDHEGEMEELNSGDHEMHSGSSKEPSVEHPDDDVEEGKNDDVNYKTHQS
KVQGTQPQARGFSFQTCKVTYGGVDGAYYTSSRTRRTGNDGVVLEESKEADRTTGQATHR
ISRGINDKGHSFTKKLNSDGKVDALQTLHNLNEDELAGFEEAWKGNANKHYWSEGFDMNR
NAGSSQEQKGRSAYGGWALPSSEKTRNAGVTTSYNEAMASDSGGRAKKVVRINIE*

Transcript Sequence

Transcript ID

orange1.1t00233.2
Transcript Infomation

gene=orange1.1t00233 CDS=520-1407
Sequence

TAGTGATAGTTTGTTCCAGAGTTATGTCCATGGCGATTTTCTCACAGGAATAAGGAATTA
ACGCGTAAAAAGATGTTATTAATATATACGGAAACTGAAATTTGATCATTGCGTTTTCCA
CTTTCTTCTCCATATACAGTATTCTCACCATCATTCAGACCGAGCATCATTATTGAAGTT
AGATTTCCTGAACATTTACTTGATCCTTTTCCAGTATCTACCATGGCAGTTTGATGGTTT
TTTTTTTTTTCCCGGTTCGAGTGTTCGCTTAAGTTTTATAATACTGAGTAATTCAGCATG
TACATTTAAGTTGTAGCTGCAGTATATATTGATTTTAACTCTATCTATTATTTGTGTAAT
TCATTTTAATTTGCTTCCCTCGTTAGTTCTGAACATGCTGATTTCCTTGATATCCTTTTT
ATATTTAAAGCTTAAGTTGTTGGTTTTATTACTCTCCTTAATAGGTTTTTTTTTCCCCCT
TTTTTGACCTTTTTATTATAGGAAATAGCTTATAAAACAATGCAGAGGGGAAGAGAAGAT
AGAAATGATTTGTTTGGTACGGGTGACCCATTTAGTATTTTTCGCGGTTTTGGATCCCTC
AGGAGTATGATGCCTACCCCATTTGGGGGCGGGGCTCCATTTGATGATCTGTTCTTTACT
CGTCCATTTGGCAGCAAAGAGCCTATAACACCAAACAATAATGAGAAGGGATTAGTGATA
GAAGAATTAAATTCTGATCATGAAGGAGAAATGGAAGAACTAAATTCTGGGGACCATGAA
ATGCATTCTGGGTCAAGCAAAGAGCCTTCTGTTGAGCATCCAGATGATGATGTAGAAGAA
GGGAAGAATGATGATGTGAATTATAAGACTCATCAGAGCAAGGTACAAGGGACTCAGCCA
CAGGCTCGTGGTTTTAGTTTTCAGACTTGCAAAGTAACATATGGCGGTGTTGATGGAGCG
TACTATACTTCTTCAAGAACAAGGAGGACTGGCAATGATGGTGTGGTGCTTGAGGAGAGC
AAAGAAGCAGATAGAACAACTGGTCAAGCAACACATAGGATTTCAAGAGGAATTAATGAC
AAGGGTCATTCATTTACAAAGAAGCTTAATTCGGATGGTAAAGTGGATGCACTTCAAACT
CTGCATAATTTAAATGAAGATGAGCTTGCTGGTTTTGAAGAAGCATGGAAGGGGAATGCA
AATAAGCATTATTGGAGTGAAGGATTTGATATGAATCGTAACGCAGGTTCTAGCCAAGAA
CAAAAGGGAAGGTCAGCTTATGGTGGTTGGGCACTTCCATCTTCAGAGAAAACCCGAAAC
GCTGGAGTCACAACATCATATAATGAAGCCATGGCTAGTGATTCAGGGGGGAGAGCAAAA
AAGGTTGTTAGAATTAATATAGAATGATTCAAGCGTCCATTATATTTATGAATTGTAGCA
GAACAGTCTGTCCGTGTTATCATTTCTTGGCCTTACCCTAAACCACCTACCAATTGTTAT
AGTATCTGTTGTGTCTGTTGGGATTGATTATAGCACACTATAATTCTGTTTTTTTTTTTT
TTTTGGGGGGGGGGTTAGAAATGTAATCGTCGGTTACCTTCGAATTAGAAGACGGCTAAT
GATCGTAATGTTAATTGTCGATTTCCTTTTTCTTCTAAAATAAGATCAGAATCTTATGTC
TTTGCAAATAATTATTCCATTTCGGTTGACTCGAGACACTGAAGTGTTAACCGGAGCCTT
GCCTAACCTAGCCGACCACAATTTAATGGTTGGCTGAAAGGGTCATATCATTTTTTTTAA