Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00214.1
CDS Infomation

gene=orange1.1t00214
Sequence

ATGGCTCTTCGAATTCTTATAACTGTCTCACTTGTGCTCTTTTCTCTCTCTCATACCTCT
TTTGGGTACAGCCCAGAAGAAGTAAAATCGTGGTGTGGCAAAACGCCAAACCCTCAACCA
TGCGAGTATTTTTTGACACAAAAAACTGATGTCACTTCCATCAAACAAGACACTGACTTT
TACAAAATTTCATTACAGCTTGCACTAGAACGTGCCACGACAGCCCAATCACGCACGTAT
ACCCTTGGCTCAAAGTGCCGAAACGAGCGTGAAAAGGCTGCATGGGAAGATTGCCGCGAG
CTTTATGAACTAACAGTTCTTAAGCTCAACCAAACCTCCAACTCTAGCCCTGGATGCACC
AAAGTTGACAAACAAACATGGCTTAGCTCGGCTCTTACAAACTTAGAGACGTGCCGAGCC
AGCTTAGAGGATCTTGGGGTTCCCGAATATGTGTTACCTTTATTGTCAAATAATGTAACA
AAGTTGATCAGTAACGCTCTGTCCCTCAACAAGGTGCCATATAATGAGCCTAGTTACAAA
GATGGCTTCCCAACGTGGGTCAAGCCCGGCGACCGAAAGCTGTTGCAGACGACTCCACGA
GCAAATATTGTGGTGGCCCAGGATGGTTCCGGGAATGTTAAAACGATACAGGAGGCAGTA
GCGGCGGCATCGCGGGCAGGTGGCAGCAGGTATGTGATTTATATCAAGGCAGGAACATAT
AATGAGAACATTGAAGTGAAGTTGAAGAATATTATGTTCGTGGGAGATGGGATTGGCAAG
ACTATTATCACTGGGAGCAAAAGTGTTGGAGGTGGCGCTACAACCTTCAAATCAGCTACT
GTTGCTGTTGTTGGAGATAACTTCATTGCTCGTGACATAACAATCCGCAACACTGCTGGT
CCAAACAATCACCAGGCGGTGGCACTGCGTTCCGGGTCGGATCTCTCAGTTTTCTACAGA
TGCAGCTTTGAAGGATACCAGGACACCCTCTACGTTCATTCACAGCGTCAATTCTACAGA
GAGTGTGACATTTATGGGACAGTGGATTTCATATTTGGTAACGCTGCGGTTGTGTTACAA
AACTGCAACATATTTGCACGCAAACCCCCCAACAGGACCAACACTCTCACCGCACAAGGC
AGAACCGACCCTAACCAGAACACTGGAATCATTATTCACAACTGTAGGGTCACTGCTGCT
TCCGACTTGAAGCCTGTTCAAAGCTCCGTTAAGACATTCCTTGGGAGACCCTGGAAGCAG
TACTCGCGAACCGTTTACATCAAGACCTTCCTTGACAGCTTGATAAACCCCGCTGGATGG
ATGGAATGGAGTGGTGATTTTGCTTTGAATACTCTGTATTATGCTGAGTATATGAACACT
GGCCCGGGTTCTTCAACTGCTAACAGAGTCAAGTGGCGTGGCTATCACGTTCTTACCAGT
CCGTCCCAGGTTAGCCAGTTCACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCG
GCCACCAACGTCCCCTTCACCTCCGGTCTCTAG

Peptide Sequence

PEP ID

orange1.1t00214.1
PEP Infomation
Sequence

MALRILITVSLVLFSLSHTSFGYSPEEVKSWCGKTPNPQPCEYFLTQKTDVTSIKQDTDF
YKISLQLALERATTAQSRTYTLGSKCRNEREKAAWEDCRELYELTVLKLNQTSNSSPGCT
KVDKQTWLSSALTNLETCRASLEDLGVPEYVLPLLSNNVTKLISNALSLNKVPYNEPSYK
DGFPTWVKPGDRKLLQTTPRANIVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTY
NENIEVKLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAG
PNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQ
NCNIFARKPPNRTNTLTAQGRTDPNQNTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQ
YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTS
PSQVSQFTVGNFIAGNSWLPATNVPFTSGL*

Transcript Sequence

Transcript ID

orange1.1t00214.1
Transcript Infomation

gene=orange1.1t00214 CDS=42-1574
Sequence

CCGAAGTCCATAGCAAGCTTTTCGATCCATTATTATCTCAAATGGCTCTTCGAATTCTTA
TAACTGTCTCACTTGTGCTCTTTTCTCTCTCTCATACCTCTTTTGGGTACAGCCCAGAAG
AAGTAAAATCGTGGTGTGGCAAAACGCCAAACCCTCAACCATGCGAGTATTTTTTGACAC
AAAAAACTGATGTCACTTCCATCAAACAAGACACTGACTTTTACAAAATTTCATTACAGC
TTGCACTAGAACGTGCCACGACAGCCCAATCACGCACGTATACCCTTGGCTCAAAGTGCC
GAAACGAGCGTGAAAAGGCTGCATGGGAAGATTGCCGCGAGCTTTATGAACTAACAGTTC
TTAAGCTCAACCAAACCTCCAACTCTAGCCCTGGATGCACCAAAGTTGACAAACAAACAT
GGCTTAGCTCGGCTCTTACAAACTTAGAGACGTGCCGAGCCAGCTTAGAGGATCTTGGGG
TTCCCGAATATGTGTTACCTTTATTGTCAAATAATGTAACAAAGTTGATCAGTAACGCTC
TGTCCCTCAACAAGGTGCCATATAATGAGCCTAGTTACAAAGATGGCTTCCCAACGTGGG
TCAAGCCCGGCGACCGAAAGCTGTTGCAGACGACTCCACGAGCAAATATTGTGGTGGCCC
AGGATGGTTCCGGGAATGTTAAAACGATACAGGAGGCAGTAGCGGCGGCATCGCGGGCAG
GTGGCAGCAGGTATGTGATTTATATCAAGGCAGGAACATATAATGAGAACATTGAAGTGA
AGTTGAAGAATATTATGTTCGTGGGAGATGGGATTGGCAAGACTATTATCACTGGGAGCA
AAAGTGTTGGAGGTGGCGCTACAACCTTCAAATCAGCTACTGTTGCTGTTGTTGGAGATA
ACTTCATTGCTCGTGACATAACAATCCGCAACACTGCTGGTCCAAACAATCACCAGGCGG
TGGCACTGCGTTCCGGGTCGGATCTCTCAGTTTTCTACAGATGCAGCTTTGAAGGATACC
AGGACACCCTCTACGTTCATTCACAGCGTCAATTCTACAGAGAGTGTGACATTTATGGGA
CAGTGGATTTCATATTTGGTAACGCTGCGGTTGTGTTACAAAACTGCAACATATTTGCAC
GCAAACCCCCCAACAGGACCAACACTCTCACCGCACAAGGCAGAACCGACCCTAACCAGA
ACACTGGAATCATTATTCACAACTGTAGGGTCACTGCTGCTTCCGACTTGAAGCCTGTTC
AAAGCTCCGTTAAGACATTCCTTGGGAGACCCTGGAAGCAGTACTCGCGAACCGTTTACA
TCAAGACCTTCCTTGACAGCTTGATAAACCCCGCTGGATGGATGGAATGGAGTGGTGATT
TTGCTTTGAATACTCTGTATTATGCTGAGTATATGAACACTGGCCCGGGTTCTTCAACTG
CTAACAGAGTCAAGTGGCGTGGCTATCACGTTCTTACCAGTCCGTCCCAGGTTAGCCAGT
TCACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCGGCCACCAACGTCCCCTTCA
CCTCCGGTCTCTAGGTTGATCATTCTTTGTTTATATTTTATTGCACATGAAATTAATACC
AACTTGTTGAGGTAATTAGGAGGAAAAATAATAATAATAAGGTAGTTAAAAGGAACTACC
ATCTTGGCATTGTCAGTTGTTATTCTTTGTGAAGTTGT