Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00197.1
CDS Infomation

gene=orange1.1t00197
Sequence

ATGGCGAGACTCGATTCATCAGATTCAGAGCCCGAAGAGAGTGAGAATCTGAGTTCAGAA
GAAGAAGAAAGCGAGGCGCCTAATATTAATAGCAATGGGGAAAAGGAACATGAGATATCG
GCGTACGAGAAGCAGAGGCTGTCAAGAATTGCAGAGAACAAAGCCAGGATGGAGGCTATG
GGTCTTTCCAAACTTGCTTCTTCTTTAATGGGTTCGCCTCAGAATTTGAGTAAGTGTAAA
GGGAAACGCAAGGTCCTCGAGGACGATGAGGATTACAGGCCTAATGATGAAGACGAAGGC
GAAGATGAAGATGAAGATGGTGGTGGTGACGATGACGATGCGGAGTTTTTGGGCAATAAA
GCTTCCAGGTCTTACAAAATGAAGGGGAAGAATAAAAGCTCAATACAGAAGAAGAAAAGC
TCCACACGTAAGAAGAAAGCCACTATTCAAAAGCAATTGAGTAGCTCAGATTGTGTTGCT
GCCGCTGCTGATGATGATGAGTTAATGCAGGCAATAGCTCTATCACTGCAACCTTCTGAA
GAACTTTCAGCTCCTACTCAGAATGGGAAAAAGGGAATTGCTTGTGGTCGGGAAAATACA
GGAATGGGCAAGAGGAAAAAATCGTTCACAGCTCGGGTGAAAATGACAGAAGATGAAGTG
ATCTTACACTTCTTTCAGTTTAATGATGCAGAAAAAGGTAGCATAAGTCTGAGAGATTTA
CGAAGAGTATCGGTTGCACATGATTTCATTTGGACAGACGATGAGTTGTTTGATATGATC
CATTGCTTTGATAGTGATGGAGATGGGAAGCTTAATCTTGAGGATTTTCAGAAGATTGTC
AGTCGATGCAATATGATATGA

Peptide Sequence

PEP ID

orange1.1t00197.1
PEP Infomation
Sequence

MARLDSSDSEPEESENLSSEEEESEAPNINSNGEKEHEISAYEKQRLSRIAENKARMEAM
GLSKLASSLMGSPQNLSKCKGKRKVLEDDEDYRPNDEDEGEDEDEDGGGDDDDAEFLGNK
ASRSYKMKGKNKSSIQKKKSSTRKKKATIQKQLSSSDCVAAAADDDELMQAIALSLQPSE
ELSAPTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDL
RRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCNMI*

Transcript Sequence

Transcript ID

orange1.1t00197.1
Transcript Infomation

gene=orange1.1t00197 CDS=219-1079
Sequence

AATCAATCCCTACTTCATTAAGAATTTGAGATTTTTTTTTCTCTATTTCTCACTTATTTT
TTAAAATTTATTTAAAATTCATCCATTAAGGATGAGGGTTCCAAACCGTAGAAAATTATG
GCATCCCTACTGTCTGTACATTGCATTAAAAAAATTATTACAATAATAATTTTTGGGTTT
TTAGCTAAGACCAAAACTCAATCTTCTAAATAAACAAAATGGCGAGACTCGATTCATCAG
ATTCAGAGCCCGAAGAGAGTGAGAATCTGAGTTCAGAAGAAGAAGAAAGCGAGGCGCCTA
ATATTAATAGCAATGGGGAAAAGGAACATGAGATATCGGCGTACGAGAAGCAGAGGCTGT
CAAGAATTGCAGAGAACAAAGCCAGGATGGAGGCTATGGGTCTTTCCAAACTTGCTTCTT
CTTTAATGGGTTCGCCTCAGAATTTGAGTAAGTGTAAAGGGAAACGCAAGGTCCTCGAGG
ACGATGAGGATTACAGGCCTAATGATGAAGACGAAGGCGAAGATGAAGATGAAGATGGTG
GTGGTGACGATGACGATGCGGAGTTTTTGGGCAATAAAGCTTCCAGGTCTTACAAAATGA
AGGGGAAGAATAAAAGCTCAATACAGAAGAAGAAAAGCTCCACACGTAAGAAGAAAGCCA
CTATTCAAAAGCAATTGAGTAGCTCAGATTGTGTTGCTGCCGCTGCTGATGATGATGAGT
TAATGCAGGCAATAGCTCTATCACTGCAACCTTCTGAAGAACTTTCAGCTCCTACTCAGA
ATGGGAAAAAGGGAATTGCTTGTGGTCGGGAAAATACAGGAATGGGCAAGAGGAAAAAAT
CGTTCACAGCTCGGGTGAAAATGACAGAAGATGAAGTGATCTTACACTTCTTTCAGTTTA
ATGATGCAGAAAAAGGTAGCATAAGTCTGAGAGATTTACGAAGAGTATCGGTTGCACATG
ATTTCATTTGGACAGACGATGAGTTGTTTGATATGATCCATTGCTTTGATAGTGATGGAG
ATGGGAAGCTTAATCTTGAGGATTTTCAGAAGATTGTCAGTCGATGCAATATGATATGAG
CATCTGAACATTCTTGATGGGTTTGTATAGTCCATAATTCAGTTGTGTTTTCTCTGGGTA
TTCTGAGGTAGTAGGGCACCTGAAGAGCTCTTAAATATTTATCTCCATATGTACACATGA
TGATATTGTTGGGCAATTTTCTTTTCCACAATACAAAACAAATGGGAAAGTAGTTGGGCA
ATTAAATGGCGTGTAAGCACAGGAGTTCCACACTCGGATTTTGTTTGGGACCTGCAACTA
TTGCTTGCTGATAATAGTGCAACGTCTTGAAATTTTGATTATTCTTCTGTAGGCACGCAA
TGAGAATATTGGATCGTTAAAGCAGTAGTGCATGGGCTATTCACAGGATCAGTCACACAC
GCTAATGCTTTTGCCTCACAACATCTGAATTTAGTAAACATTGCACTAGCTCAATGAAAA
AGTCATTAACTTTGCTAAATGGAAAACAAGAACTTTTGACCTGGTTACTTAATTTCAAAG
GTCGAGCCTCATAACTCACACTTGACTTATACTAGTTTTGATACAGACCAATAACACATT
GAAGATGCTGCTGATCAGTCACACATCTGTTTTATCAATTTTCTACAATTCATTTTTTGG
CTAGGGTACTGATGAAATCAAATATGCTTTGTTGGTCAAATCTTCTTCATAAGGTACCCC
AAAATGATACCAATGAAGCCAACAATAACAACATATATGAAGGGGAGTCCACTGCTACTT
CTGTTGGCTTGACGCCTTAAGAGCTCCTGCACAATATAATCTCATGTAAGCAGGCTGCCA
TAATGCCACTGATTGTAATCATATCACTATGATACAATAATTAGGAATACTTAAGCACAA
GCTAATTGGAAAAACTTACATCTAAGCACAATTATTAAAAGGATTTCCAGTTGCGTAAGT
CATTCATAAATTGGCATTTGAATGAATGAGTAGAGATCAAATATGCGCTGGACTAGTAAA
TTTGGGTACGGTTCCCACTCAAAGTGACTTTTCTATGGATAAGGAAATGT