Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00187.1
CDS Infomation

gene=orange1.1t00187
Sequence

ATGGCACATGTTTTTCGATATCCCATATCATTTTTCACTCTTGTATTCATGTTTCCTCTT
TTCCTGCACTCATGTTGGTGCTTCAATCCCAAGCTACTTAATATCACCATGGCAGAGTCG
GGGTCTGATTGGTCCCCGGCTGGGGCAACGTGGTACGGTAGCCCTACTGGTGCAGGAAGC
GATGGTGGCGCTTGTGGGTACGGAGCGGCAGTGGAGCAAGCCCCGTTCTCCGCACTGATT
TCTGCTGGAGGCCCCTCTTTGTACAAATCTGGCAAAGGATGTGGAGCCTGTTATCAGGTA
AAATGTACACATCCGGAATGCTCGGGAAATCCAGTGACAGTGGTCATTACTGATGAATGC
CCTGGGGGGCCCTGTGTTTCAGAATCAGTTCATTTCGACTTAAGTGGCACTGCTTTTGGA
GCTATGGCAATTTCTGGCAAGGCTGATCAACTCCGTAACGTTGGGGTCTTACAGATTCAG
CACAGAAGAGTTGAGTGCAACTATCCTGGCATGAGGATAGCATTTCACGTTGATTCAGGC
TCAAACCCTAACTATTTTGCGACACTGATTGAGTACGAAGATGGTGACGGTGACCTTGCT
TCAGTTGACCTGCAACAAGCTCTGGACTCATCCGACTCGTGGCTTCCCATGCAACGGTCA
TGGGGTGCTGTTTGGAAACTTAACTATGGATCCACTTTACGTGCTCCGTTTTCGCTCCGT
TTAACGGCAGCCGAATCTGGGAAAGCTCTTGTAGCAAAAGGAGTTATTCCGGCTGGTTGG
CAACCTGGACAAACTTACCGATCACTTGTCAATTTTACACCCTAG

Peptide Sequence

PEP ID

orange1.1t00187.1
PEP Infomation
Sequence

MAHVFRYPISFFTLVFMFPLFLHSCWCFNPKLLNITMAESGSDWSPAGATWYGSPTGAGS
DGGACGYGAAVEQAPFSALISAGGPSLYKSGKGCGACYQVKCTHPECSGNPVTVVITDEC
PGGPCVSESVHFDLSGTAFGAMAISGKADQLRNVGVLQIQHRRVECNYPGMRIAFHVDSG
SNPNYFATLIEYEDGDGDLASVDLQQALDSSDSWLPMQRSWGAVWKLNYGSTLRAPFSLR
LTAAESGKALVAKGVIPAGWQPGQTYRSLVNFTP*

Transcript Sequence

Transcript ID

orange1.1t00187.1
Transcript Infomation

gene=orange1.1t00187 CDS=29-853
Sequence

GTGGCAACAGTTCATTGTGTACAATAATATGGCACATGTTTTTCGATATCCCATATCATT
TTTCACTCTTGTATTCATGTTTCCTCTTTTCCTGCACTCATGTTGGTGCTTCAATCCCAA
GCTACTTAATATCACCATGGCAGAGTCGGGGTCTGATTGGTCCCCGGCTGGGGCAACGTG
GTACGGTAGCCCTACTGGTGCAGGAAGCGATGGTGGCGCTTGTGGGTACGGAGCGGCAGT
GGAGCAAGCCCCGTTCTCCGCACTGATTTCTGCTGGAGGCCCCTCTTTGTACAAATCTGG
CAAAGGATGTGGAGCCTGTTATCAGGTAAAATGTACACATCCGGAATGCTCGGGAAATCC
AGTGACAGTGGTCATTACTGATGAATGCCCTGGGGGGCCCTGTGTTTCAGAATCAGTTCA
TTTCGACTTAAGTGGCACTGCTTTTGGAGCTATGGCAATTTCTGGCAAGGCTGATCAACT
CCGTAACGTTGGGGTCTTACAGATTCAGCACAGAAGAGTTGAGTGCAACTATCCTGGCAT
GAGGATAGCATTTCACGTTGATTCAGGCTCAAACCCTAACTATTTTGCGACACTGATTGA
GTACGAAGATGGTGACGGTGACCTTGCTTCAGTTGACCTGCAACAAGCTCTGGACTCATC
CGACTCGTGGCTTCCCATGCAACGGTCATGGGGTGCTGTTTGGAAACTTAACTATGGATC
CACTTTACGTGCTCCGTTTTCGCTCCGTTTAACGGCAGCCGAATCTGGGAAAGCTCTTGT
AGCAAAAGGAGTTATTCCGGCTGGTTGGCAACCTGGACAAACTTACCGATCACTTGTCAA
TTTTACACCCTAGCTAATTTACTGGGGTAACATCAGGTTCCATGTAGGATTAATTATTAC
CTACATCGACTTAAAAAAATAGCTATCTTTTT