Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00156.3
CDS Infomation

gene=orange1.1t00156
Sequence

ATGGCGTTAAAGGCATCAGGAGCATACCGACACTGCAGCCCATGCACGGCTCCTGGTGCG
GCTCAGAGTCGACTCAAGAGTAACTCGGGAGAGTCTGATGCCGATTCGGACCGGTTCAGG
TGGTCGTACAGAAGGACCGGTAGTTCTAGCTCCACCACACCGAGGACCACTTGGGGGAAG
GAGATGGAGGCCAGGCTTAAGGGAATATCGAGTTCGAGTGGCGAGGCCACTCCGATAAAA
TCGGTGAGTGGTCGCCGTGTTGACCCGGTCGTGTTCATTGAAGAGAATGAGCCGAAGGAA
TGGGTGGCCCAGGTGGAGCCGGGTGTGCTTATTACCTTTGTTTCTTTGCCACGTGGAGGC
AATGATCTTAAGCGGATACGCTTCAGTCGAGACATGTTTAACAAATGGCAAGCTCAAAGA
TGGTGGGCTGAAAACTACGATAGGGTCATGGAACTTTATAATGTACAGAGGTTTAACCGC
CAAGCTTTTCCACTACCAACACCACCAAGATCTGAAGATGAGAGCTCTAAAATAGAATCT
GTAGAAGAGAGCCCTGTAACACCGCCGCTGACCAGAGAACGCTTACCTCGTAACTTGTAT
CGTCCAACTGGGATGGGAATGGGATACTCATCCTCAGATTCGCTAGATCATCACCCAATG
CAAGCACGTAATTACTATGACTCTGGTGGCCTCACATCTACCCCAAAACTTTCCAGCATC
AGTGGGGCCAAAACAGAGACATCATCCATGGATGCCTCTATTAGAAGTAGCTCGTCAAGG
GATGCAGATCGCTCGGGAGAACTATCTATCAGTAATGCTAGTGATCTGGAGACTGAATGG
GTTGAACAGGATGAGCCAGGAGTTTACATCACCATCAGAGCCTTGCCAGGGGGCAAAAGA
GAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGACTGTGG
TGGGAAGAGAATAGAGCAAGGATACACGAACAATACTTGTAA

Peptide Sequence

PEP ID

orange1.1t00156.3
PEP Infomation
Sequence

MALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFRWSYRRTGSSSSTTPRTTWGK
EMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGG
NDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIES
VEESPVTPPLTRERLPRNLYRPTGMGMGYSSSDSLDHHPMQARNYYDSGGLTSTPKLSSI
SGAKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRALPGGKR
ELRRVRFSREKFGEMHARLWWEENRARIHEQYL*

Transcript Sequence

Transcript ID

orange1.1t00156.3
Transcript Infomation

gene=orange1.1t00156 CDS=400-1401
Sequence

TATTCTTTTTACTTCCGATTTTGGCAGAGAATCTCTGATGGGTATACCTGTAACTTGGCA
TTAAAGTGAGTGAGGGAGTAAGCTTCTCGATGCTTGCGCTCGGATTTTGAAGCTGTGAAT
TCAGAATTTACTGCCACTACAATTCCAACATAAATTGAGTTGGAGAGTAAAAACTAGAAA
ATGCTGACGTGCATAGCTCGGTCGAAGCAACCGGGGGATGACTCACTTAGTCAACCCGAG
GACTCTGACTCATCGACCGGCAGCGGCAGTACCAAACAACAAGCCATCAAATCTCTCACA
TCTCAGGTAATTAATCAAGTTAACATGTTATAACTCAACTCAGTCAGCCAAATTTCGTTT
TCTGAGTGTTTTGTGTTTTGGTAATTTCAGCTAAAGGACATGGCGTTAAAGGCATCAGGA
GCATACCGACACTGCAGCCCATGCACGGCTCCTGGTGCGGCTCAGAGTCGACTCAAGAGT
AACTCGGGAGAGTCTGATGCCGATTCGGACCGGTTCAGGTGGTCGTACAGAAGGACCGGT
AGTTCTAGCTCCACCACACCGAGGACCACTTGGGGGAAGGAGATGGAGGCCAGGCTTAAG
GGAATATCGAGTTCGAGTGGCGAGGCCACTCCGATAAAATCGGTGAGTGGTCGCCGTGTT
GACCCGGTCGTGTTCATTGAAGAGAATGAGCCGAAGGAATGGGTGGCCCAGGTGGAGCCG
GGTGTGCTTATTACCTTTGTTTCTTTGCCACGTGGAGGCAATGATCTTAAGCGGATACGC
TTCAGTCGAGACATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCTGAAAACTACGAT
AGGGTCATGGAACTTTATAATGTACAGAGGTTTAACCGCCAAGCTTTTCCACTACCAACA
CCACCAAGATCTGAAGATGAGAGCTCTAAAATAGAATCTGTAGAAGAGAGCCCTGTAACA
CCGCCGCTGACCAGAGAACGCTTACCTCGTAACTTGTATCGTCCAACTGGGATGGGAATG
GGATACTCATCCTCAGATTCGCTAGATCATCACCCAATGCAAGCACGTAATTACTATGAC
TCTGGTGGCCTCACATCTACCCCAAAACTTTCCAGCATCAGTGGGGCCAAAACAGAGACA
TCATCCATGGATGCCTCTATTAGAAGTAGCTCGTCAAGGGATGCAGATCGCTCGGGAGAA
CTATCTATCAGTAATGCTAGTGATCTGGAGACTGAATGGGTTGAACAGGATGAGCCAGGA
GTTTACATCACCATCAGAGCCTTGCCAGGGGGCAAAAGAGAGCTCAGACGAGTCAGATTC
AGCCGAGAAAAATTTGGGGAGATGCATGCTAGACTGTGGTGGGAAGAGAATAGAGCAAGG
ATACACGAACAATACTTGTAATTGGCATACATATCTGCTGCTGGTTTTTTCTACATTTGG
GGGTGTGTCTCTTTTATTTGTTCTGAAATACTAGTTGAATCTTTGCTATAGAGATTTGAA
TGGTGCTTTGCTAGCACCTCTCAATCCTTCAACAAGTTGGAACTTATGAAGTTTCTTCAC
TCGGTAATTGCTTGAGAAATTGAGATGAGCCTCATGGGATGCAGGTGGTGAACTCAATTT
ATAGTAGTATTTTTTTTAACAAGTATTGGTGGGTAAAGAGCATCAATTGTATTTGGAGTT
TGTTCAATACATATCAATGGAAAAAAAAGAGGGTACTATCGCCTTTGCTACCTCAATAAC
CATGACATACTGCTGTTACACGAGATTTATTGTGCTTCAGCTTGAAATTTATTTTACTCC
ATTAACATGTTATTCATAAAATCAAAACTCCCCAATTACGAACATAACTTCTACTTCTAT
CATATTAATTAACCGCCTTCTGCTCATCTTTTATTTTTCTTTTCAGCATTACAGCCATAT
CTCGCATCCAGCAAAAGGAAAAAGTGGGGAAAAGGAAAATAAAAAATTCAAAATGAGTTC
AGATTCAGTCATTTTAGAAGTGAAATCATTATAGCTACGTACTT