Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00118.5
CDS Infomation

gene=orange1.1t00118
Sequence

ATGGATAGCTCTGATGATGAAAAGGATGGAGTCTATGGGAATCATATACCAAAAGAACTG
AATCATAATTTGCCGTCCAATGGAATGAAATTTGTAGATGAGGTACTCAACGGACAAAGT
GAACGTTGTTTGGAAAACTTTCGCATGGATAAGAAGGTATTTTACAAATTGTGTGATATT
CTGCAATCGAAAGGTTTACTACGTCACACAAATCGAATCAAGATTGAAGAGCAATTAGCT
ATATTTATGTTTATTGTCGGTCATAATCTACGGACTCGAGCTGTTCAAGAGTTATTTCGA
TATTCTGGAGAAACCATTAGCCGCCATTTCAACAATGTTTTAAATGCCATTATGGCAATT
TCGTTGGATTTTTTTCAGCCTCCGGGGCCTGATGTTCCCCCAGAAATATCGTTGGATCCT
AGACTTTATCCCTATTTTAAGGATTGTGTTGGAGCCGTTGATGGTATACACATTCCAGTT
ATGGTAGGTGTGGATGAGCAAGGACCTTTCCGTAACAAGAGCGGATTACTTTCACAAAAC
GTGCTGGCAGCTTGCTCATTTGATTTGAAGTTTCATTATGTCCTGGCTGGTTGGGAAGGC
TCAGCTTCAGATTTGCGAGTTCTAAATTCAGCACTCACAAGACGCAATAAATTGCAGGTC
CCCGAAGGAAAGTATTACCTTGTGGATAACAAGTACGCAAATATGCCAGGCTTCATTGCC
CCATATCAAGCTGTTTCCTATCACACAAACCAAACTACCACTGGTTATCATCCACAAGAT
GCCAAAGAGCTATTTAATCAACGGCATTCATTATTACGGAATGCAACTGATCGTATTTTC
GGGGCCTTAAAGGAGCGGTTCCCCATTTTGTTGTCTGCTCCTCCATACCCGTTACAAACA
CAAGTGAAGTTGGTAGTGGCTGCCTGTGCATTACATAATTACATACAAAGGGAGAAGCCA
GATGATTGGCTTTTCAGGATGTATGAACAGGACACTTTATTGCCAATGGCAGAATCCTTG
CTCCCATTGGAGGGAGAACAACCAATTGTGCATGTTGACACCCGGGCCCTGGAGTTTGGT
TTTCAAACAGAACAACTAGAACTTGCTTCACATTTCCGTGATTCCATTGCAACTGAAATG
TGGGATGATTACATCAGTGGTTTAGCATCGTAG

Peptide Sequence

PEP ID

orange1.1t00118.5
PEP Infomation
Sequence

MDSSDDEKDGVYGNHIPKELNHNLPSNGMKFVDEVLNGQSERCLENFRMDKKVFYKLCDI
LQSKGLLRHTNRIKIEEQLAIFMFIVGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
SLDFFQPPGPDVPPEISLDPRLYPYFKDCVGAVDGIHIPVMVGVDEQGPFRNKSGLLSQN
VLAACSFDLKFHYVLAGWEGSASDLRVLNSALTRRNKLQVPEGKYYLVDNKYANMPGFIA
PYQAVSYHTNQTTTGYHPQDAKELFNQRHSLLRNATDRIFGALKERFPILLSAPPYPLQT
QVKLVVAACALHNYIQREKPDDWLFRMYEQDTLLPMAESLLPLEGEQPIVHVDTRALEFG
FQTEQLELASHFRDSIATEMWDDYISGLAS*

Transcript Sequence

Transcript ID

orange1.1t00118.5
Transcript Infomation

gene=orange1.1t00118 CDS=667-1839
Sequence

CGCGTGTTGAAAATTTCTCATTTCCAATAAACGGAACGTTACTTTTCTCGAGTCTTTACT
CATCCATTCTGTGTCTGTTTCAAAGGAGAAGCAGTTCAAAACAATTCTTTCAGGTAACTT
TTGCTTGTAGTTGCACTGGGCATTGCTTCATCGGATATTTCTTTTATTCAATTTTATTTA
TTAAACACAGAGAAATTCTGCAGTATTCAATTTCATATTCTGATTTTTTAATTTCATTAA
TGTGGTTTGTCTGGATAATCAACCATTCGTTTCATTACAACTTTTTTAAAAAAAAAAATC
GAATCATGGAATTTAGCGAAAGGATGTGATGATTCTTGTTTTCCTTTTTTCTTTTAAGCC
CTTTTTCTAATTGAGCTGGTGTACTCTTGAAGCTCACCTTTCTAGACAAAGGGGCAGGAA
GAGATATCCTTAAGAGGAACATGCATTTTGGTACTTTCCACTCCATGAGGTGTATGCAAA
AGATCAGATTTTCTGTGATCCTTCGATGGGTTAAATATCAGAACGATAATTTTCCTTTTA
TGCATTCCTTTGTGTCTCTAGAATTAGTCGTGGTCCCCGTGTAAAATGTTTATCTATACT
TCCAAATGACAAAATTTTTATTTTTCTGGCAACTATATCTGATTAATTGCAGAGGCTAGG
TTGATCATGGATAGCTCTGATGATGAAAAGGATGGAGTCTATGGGAATCATATACCAAAA
GAACTGAATCATAATTTGCCGTCCAATGGAATGAAATTTGTAGATGAGGTACTCAACGGA
CAAAGTGAACGTTGTTTGGAAAACTTTCGCATGGATAAGAAGGTATTTTACAAATTGTGT
GATATTCTGCAATCGAAAGGTTTACTACGTCACACAAATCGAATCAAGATTGAAGAGCAA
TTAGCTATATTTATGTTTATTGTCGGTCATAATCTACGGACTCGAGCTGTTCAAGAGTTA
TTTCGATATTCTGGAGAAACCATTAGCCGCCATTTCAACAATGTTTTAAATGCCATTATG
GCAATTTCGTTGGATTTTTTTCAGCCTCCGGGGCCTGATGTTCCCCCAGAAATATCGTTG
GATCCTAGACTTTATCCCTATTTTAAGGATTGTGTTGGAGCCGTTGATGGTATACACATT
CCAGTTATGGTAGGTGTGGATGAGCAAGGACCTTTCCGTAACAAGAGCGGATTACTTTCA
CAAAACGTGCTGGCAGCTTGCTCATTTGATTTGAAGTTTCATTATGTCCTGGCTGGTTGG
GAAGGCTCAGCTTCAGATTTGCGAGTTCTAAATTCAGCACTCACAAGACGCAATAAATTG
CAGGTCCCCGAAGGAAAGTATTACCTTGTGGATAACAAGTACGCAAATATGCCAGGCTTC
ATTGCCCCATATCAAGCTGTTTCCTATCACACAAACCAAACTACCACTGGTTATCATCCA
CAAGATGCCAAAGAGCTATTTAATCAACGGCATTCATTATTACGGAATGCAACTGATCGT
ATTTTCGGGGCCTTAAAGGAGCGGTTCCCCATTTTGTTGTCTGCTCCTCCATACCCGTTA
CAAACACAAGTGAAGTTGGTAGTGGCTGCCTGTGCATTACATAATTACATACAAAGGGAG
AAGCCAGATGATTGGCTTTTCAGGATGTATGAACAGGACACTTTATTGCCAATGGCAGAA
TCCTTGCTCCCATTGGAGGGAGAACAACCAATTGTGCATGTTGACACCCGGGCCCTGGAG
TTTGGTTTTCAAACAGAACAACTAGAACTTGCTTCACATTTCCGTGATTCCATTGCAACT
GAAATGTGGGATGATTACATCAGTGGTTTAGCATCGTAGATTGTTGATTCGTTATGTTTA
GGTTTGAAACCTTTTAAGACCATCGGGTACTTCAAATTTTCTTATGATTTAGGTCTTGAT
GACATTGATAGCGTACATTGGCATTTTGTTTATAGAAATATAAAGAATATATTGGTACAT
CATAGTTTTCCTAGAATATTTGTACCG