Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00107.3
CDS Infomation

gene=orange1.1t00107
Sequence

ATGGTTGTGGTGATGTCTGTAATGTATTATCAGAAAGGTGCTGCACCTTTTTTTGGCTGC
ATTGTGGGTAGGGTTGCTAACAGAATTAAAGATGGGAAGTTTTCTCTCGACGGGGTTGAA
TACACTTTGCCCATCAACAAGCCACCAAACAGTCTCCATGGTGGGTTCAAGGGTTTTGAT
AAAGTTGTCTGGGAGGTAGCAGAATATAAGAAAGGTGAAAACCCTTCCATTACTTTCAAG
TATCGCAGCCGTGATGGCGAGGAAGGTTACCCAGGGGATGTTTCTGTGATGGCAACCTAC
ACACTAACATCAAGCACGACAATGAGGCTTGACATGGAAGCAGTTCCAGAAAACAAGCCG
ACCCCAATCAGTTTAGCTCAACACACGTACTGGAACTTAGCAGGCCATCATTCAGGGAAC
ATACTTGACCACTCAATTCAAATATGGGGATCACACATTACTCCTGTAGATCAGAACACG
GTCCCAACTGGAGAAATTATGCCAGTCAAGGGCACCCCTTTTGATTTCACCACTGAGAAA
AAGATTGGTGCATCAATCAATGAAGTACCTGGTTTAGGGTATGATCACAACTATGTTCTT
GATTGTGGAGAAGAGAAATCAGGTCTGAAACATGCTGCAAAACTGAAGGAACCATCAACC
TCAAGGGTCCTTAATTTATGGACCAATGCCCCAGGCATGCAGTTTTACACTGGTAACTAT
GTTAACGGAGTTGTTGGAAAGGGGGGTGCAGTTTATGGAAAGCACTCAGGTGTCTGCTTG
GAGACGCAGGGGTTTCCTAACGCCATAAATCAACCTAACTTCCCTTCTGTTGTGGTTCGA
CCCGGTGAGAGCTACCAACATACTATGTTGTTTGAGTTTTCAGTTGAGTGA

Peptide Sequence

PEP ID

orange1.1t00107.3
PEP Infomation
Sequence

MVVVMSVMYYQKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFD
KVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKP
TPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEK
KIGASINEVPGLGYDHNYVLDCGEEKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNY
VNGVVGKGGAVYGKHSGVCLETQGFPNAINQPNFPSVVVRPGESYQHTMLFEFSVE*

Transcript Sequence

Transcript ID

orange1.1t00107.3
Transcript Infomation

gene=orange1.1t00107 CDS=506-1396
Sequence

GTTGCTCAAATATTTGGCCGACAGATGGCAGCAGCATCATGCCGGCAGCCTCCCGTAATT
TGTAGTGACACTCACATCCCTATCTATTCTCTCCAGTCGCATATAAAATTCTATTAGTAC
TCAAATTTCACAACAAAGAGAAAAATGGCTGATCATACATTAAAACCAGAAGTGTTTGAA
CTGAACAATGGAAGCATGCAAGTCAAAATTACCAATTATGGAGCCATTATCACCTCACTT
TCTGTACCTGACAAACATGGAAATTGGGCTGACGTTGTTCTTGGATTCGACTCTGTCGAA
CCATACGTGGTGAGTCCTATTTGATTTTTGGATTAACCATGGTTCTGGGTTTACTCATTG
GCTTTTTCGCTGTAAATAATGTGACCCATTTTGTAATAGGACTTTCATTAGCATTATATC
AGTACCTTGTTCTTGTGTGTATGTTAAATATGCCATTTTGTGCAAGTTGTTAGCTTAATG
AAATCTTGGTATTGTACATTTGACTATGGTTGTGGTGATGTCTGTAATGTATTATCAGAA
AGGTGCTGCACCTTTTTTTGGCTGCATTGTGGGTAGGGTTGCTAACAGAATTAAAGATGG
GAAGTTTTCTCTCGACGGGGTTGAATACACTTTGCCCATCAACAAGCCACCAAACAGTCT
CCATGGTGGGTTCAAGGGTTTTGATAAAGTTGTCTGGGAGGTAGCAGAATATAAGAAAGG
TGAAAACCCTTCCATTACTTTCAAGTATCGCAGCCGTGATGGCGAGGAAGGTTACCCAGG
GGATGTTTCTGTGATGGCAACCTACACACTAACATCAAGCACGACAATGAGGCTTGACAT
GGAAGCAGTTCCAGAAAACAAGCCGACCCCAATCAGTTTAGCTCAACACACGTACTGGAA
CTTAGCAGGCCATCATTCAGGGAACATACTTGACCACTCAATTCAAATATGGGGATCACA
CATTACTCCTGTAGATCAGAACACGGTCCCAACTGGAGAAATTATGCCAGTCAAGGGCAC
CCCTTTTGATTTCACCACTGAGAAAAAGATTGGTGCATCAATCAATGAAGTACCTGGTTT
AGGGTATGATCACAACTATGTTCTTGATTGTGGAGAAGAGAAATCAGGTCTGAAACATGC
TGCAAAACTGAAGGAACCATCAACCTCAAGGGTCCTTAATTTATGGACCAATGCCCCAGG
CATGCAGTTTTACACTGGTAACTATGTTAACGGAGTTGTTGGAAAGGGGGGTGCAGTTTA
TGGAAAGCACTCAGGTGTCTGCTTGGAGACGCAGGGGTTTCCTAACGCCATAAATCAACC
TAACTTCCCTTCTGTTGTGGTTCGACCCGGTGAGAGCTACCAACATACTATGTTGTTTGA
GTTTTCAGTTGAGTGAACTATTAGTCTCTTGAAGAGTAGTTCTTGGAATAAGGTTATTGT
TCATGGGTTTGCATACCATGGCGAGTACTGATGTTTGGATGTTGGCTAAATCTCTTAATA
AAATAATATTATAAGACAATTGTATGAATAGAAGATCATTTTGGATTTTCTCTGAAATTC
ACTATGGTATCTTGGCATTTAAATTTTAAACAGTCTTATTGATGATAGTAGGGACAGGTG
GTTACCTCTGGTAACAAAAAATCTATATCTAAGCATTGAGCCTTTTTAAATTGG