Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00097.1
CDS Infomation

gene=orange1.1t00097
Sequence

ATGAGAAGATCAACTACTGTAACTTCCTTGATACTTTCCAGTAGAACCCTAGCCACCGCC
ACCATTAACCACCGTCTCCTCACCACCAATTCCACTTCATACAGCCGATGGCGTTGCTTC
TCCACAGGCTCAGCTGCAGCCGCCGCCACCGCCTCTCTTGGCGTCGCCGGTGCTCTAGCC
TCTGCTGCTGCAATCGCTTCCCTCTCAGCCCAAAGCGTCTACGCCAAGGAGCCTTTGCCA
ACGGACCTTGTTCCTAAGGAAGTTGTTCTCTATCAGTACGAAGCTTGCCCATTTTGCAAT
AAAGTTAAAGCATTCCTGGACTACTATGATATACCTTACAAAGTTGTGGAAGTGAATCCA
ATTAATAAGAAAGAGATCAAGTGGTCTGAATATAAAAAGGTGCCTATTTTGATGGTGGAT
GGCGAGCAACTGGTCGACTCATCTGCTATAATTGATCAGTTGGACCAAAAATTAACTCCA
AAGAGGAAGGCCGATTCACCCTCTGGCGATGATGAAGAGAAAAAGTGGCGTGGATGGGTG
GATAATCACCTTGTGCATCTGTTGTCCCCAAACATATATCGCAATACTTCTGAGGCTCTT
GAGTCCTTTGACTATATCACAAGCAGTGGCAATTTCAGCTTCACAGAAAAACTTACAGCA
AAATATGCTGGAGCTGCAGCAATGTATTTTGTGTCCAAAAAACTGAAAAAGAAATACAAT
ATTACTGATGAGCGCGCTGCATTATATGAAGCTGCAGAAACATGGGTGGATGCTCTTAAT
GGTAGGGAATTTCTAGGGGGTTCGAAGCCTAATTTAGCTGACCTTGCTGTGTTTGGAGTA
TTAAGACCAATCCGGTACCTAAGATCAGGTAGAGACATGGTGGAGCACACTCGAATAGGA
GAGTGGTATACAAGAATGGAGCGAGTTGTTGGAGAGTCTTCGAGGATCAAGGCCTCCTAA

Peptide Sequence

PEP ID

orange1.1t00097.1
PEP Infomation
Sequence

MRRSTTVTSLILSSRTLATATINHRLLTTNSTSYSRWRCFSTGSAAAAATASLGVAGALA
SAAAIASLSAQSVYAKEPLPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNP
INKKEIKWSEYKKVPILMVDGEQLVDSSAIIDQLDQKLTPKRKADSPSGDDEEKKWRGWV
DNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYN
ITDERAALYEAAETWVDALNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIG
EWYTRMERVVGESSRIKAS*

Transcript Sequence

Transcript ID

orange1.1t00097.1
Transcript Infomation

gene=orange1.1t00097 CDS=20-979
Sequence

CTCTCGAAGATCGGTCGCGATGAGAAGATCAACTACTGTAACTTCCTTGATACTTTCCAG
TAGAACCCTAGCCACCGCCACCATTAACCACCGTCTCCTCACCACCAATTCCACTTCATA
CAGCCGATGGCGTTGCTTCTCCACAGGCTCAGCTGCAGCCGCCGCCACCGCCTCTCTTGG
CGTCGCCGGTGCTCTAGCCTCTGCTGCTGCAATCGCTTCCCTCTCAGCCCAAAGCGTCTA
CGCCAAGGAGCCTTTGCCAACGGACCTTGTTCCTAAGGAAGTTGTTCTCTATCAGTACGA
AGCTTGCCCATTTTGCAATAAAGTTAAAGCATTCCTGGACTACTATGATATACCTTACAA
AGTTGTGGAAGTGAATCCAATTAATAAGAAAGAGATCAAGTGGTCTGAATATAAAAAGGT
GCCTATTTTGATGGTGGATGGCGAGCAACTGGTCGACTCATCTGCTATAATTGATCAGTT
GGACCAAAAATTAACTCCAAAGAGGAAGGCCGATTCACCCTCTGGCGATGATGAAGAGAA
AAAGTGGCGTGGATGGGTGGATAATCACCTTGTGCATCTGTTGTCCCCAAACATATATCG
CAATACTTCTGAGGCTCTTGAGTCCTTTGACTATATCACAAGCAGTGGCAATTTCAGCTT
CACAGAAAAACTTACAGCAAAATATGCTGGAGCTGCAGCAATGTATTTTGTGTCCAAAAA
ACTGAAAAAGAAATACAATATTACTGATGAGCGCGCTGCATTATATGAAGCTGCAGAAAC
ATGGGTGGATGCTCTTAATGGTAGGGAATTTCTAGGGGGTTCGAAGCCTAATTTAGCTGA
CCTTGCTGTGTTTGGAGTATTAAGACCAATCCGGTACCTAAGATCAGGTAGAGACATGGT
GGAGCACACTCGAATAGGAGAGTGGTATACAAGAATGGAGCGAGTTGTTGGAGAGTCTTC
GAGGATCAAGGCCTCCTAAACTGGAAACCCAACCATTCTGTCTGGACTCTGCAGCGTTAA
GTTTAAGATTATTCACCAAAAGTGACATTTTTGGTCTTCCCTTTTTGGGATAAATGATTA
TAATTTGGC