Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00090.1
CDS Infomation

gene=orange1.1t00090
Sequence

ATGATCACACTCGCAGACTTTTACCATGTCATGACTGCAATGGTTCCACTTTATGTGGCC
ATGATCTTAGCTTATGGGTCAGTGAAATGGTGGAAGATTTTCACTCCTGATCAGTGCTCA
GGCATCAACCGTTTTGTTGCTCTCTTTGCAGTCCCCTTGCTCTCTTTCCATTTCATCTCA
TCCAACGACCCTTACAAAATGAACTTGAGGTTCATTGCAGCTGATACTCTTCAAAAAATC
ATAGTCCTTGTGGTTCTAGCAATTTGGAGCAAGTTGAGCAAAAGGGGTTGTTTAGAATGG
ACCATCACTCTATTTTCAGTATCAACTTTACCAAACACTCTAGTCATGGGCATTCCTTTA
CTCAAAGGAATGTACGGCGAGTTCTCTGGAAGCTTGATGGTGCAAATAGTTGTTCTTCAA
TGCATCATTTGGTACACTTTGATGTTATTCATGTTTGAATATAGAGGTGCCAGGTTGCTT
ATCTCTGAGCAATTCCCAGACACTGCTGGCTCTATTGTCTCAATACATGTTGATTCTGAC
ATCATGTCACTTGATGGAAGGCAGCCACTTGAAACAGACGCTGAGATCAAAGAAGATGGA
AAGCTTCATGTCACTGTCCGAAAATCAAATGCCTCACGATCAGACATTTTCTCAAGAAGG
TCTCAAGGGCTGTCGTCAACAACTCCACGCCCATCAAACTTAACGAATGCAGAGATTTAC
TCTTTGCAGTCATCAAGAAACCCAACACCACGAGGGTCAAGCTTTAACCACGCTGACTTT
TACTCAATGATGGCCGGTGGCCGCAGTTCAAACTTCGGCGCCACTGACGTGTATGGTCTC
TCGGCGACGTCGCGTGGACCCACCCCAAGACCATCTAACTATGAAGATGAAGCTAATAAT
GCTAACAAGTCAAGGTTCCATCACTACCCGGCACCAAATCCGGGCATGTTTTCTCCAACT
AATAATAATACTAGAGTTAATGCCAGTGCAAATAAGAAGGCTATTAATGGTCAAGCTCAG
CAGAAAGGAGAAGATGGTGCTGGAGCTGGAGCTGGAGCTAGGGATCTTCATATGTTTGTT
TGGAGTTCGAGTGCTTCTCCTGTATCTGATGTATTTGGTGGCCATGATTATAATAATAAT
GACCACAAAGAAGTGAGATTGGCTGTGTCACCACAAGGAGGAAAAGGAGAGGGTGGTGGT
GGTCATGAAGAGTACATGGAGAGAGAAGATTTTAGCTTTGGCAACAGAAGAGGATTGGAG
AGCAACAACAATGAAGGAGAAAAAGTTGGTGATGAGAAGCCTAAAGCTATGCCGCCGACA
AGTGTAATGACAAGGCTTATACTGATTATGGTTTGGAGAAAACTTATCAGAAATCCCAAC
ACTTACTCCAGCTTAATTGGCCTCGTTTGGTCATTAGTTTCGTTCAGGTACATGACATGT
TAG

Peptide Sequence

PEP ID

orange1.1t00090.1
PEP Infomation
Sequence

MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS
SNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPL
LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSD
IMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIY
SLQSSRNPTPRGSSFNHADFYSMMAGGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANN
ANKSRFHHYPAPNPGMFSPTNNNTRVNASANKKAINGQAQQKGEDGAGAGAGARDLHMFV
WSSSASPVSDVFGGHDYNNNDHKEVRLAVSPQGGKGEGGGGHEEYMEREDFSFGNRRGLE
SNNNEGEKVGDEKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRYMTC
*

Transcript Sequence

Transcript ID

orange1.1t00090.1
Transcript Infomation

gene=orange1.1t00090 CDS=620-2062
Sequence

TGAAGATAAAAAAGCGAATCCATTCCAAGAAGAAAGAGAGAGAGAGAGAGAAAAAGAAAA
AAGGCAAGAGGGAACAGGCTCTTTACAAAGCTTAAAAAGCTCTTAAAACAAGTACTCGGA
GACACATCCACCTCCAGGCTCCCACCAAACAAAAGTGCTTTTTCTACTTATATACTTTGC
ACAACCATTAGCCAAGTCCATTGAAGATAGAGCCTCCCCTCCTCCCCACACAGATTTTAA
GATTTACCAAGTTATATATATCTCTCTCTCAAATCCAAACACAAATACTACTCAAAACAA
AAAGGATAAAAACAAACAAAATAAAAAAAAAAGTTTAAAAAGCAAAATACTCTGTGCTTT
GGGGAATGCAAGTGCAAGCTTGCTCACAGCTCTCAAAGCTGTATCAGTGAAAAAAAATTC
CTCTGTTCTGCTTATTACTACCCACTACTCCAAAACCCCAAAAACACATGCTGTTCCCTT
TGTTTTCCTCTCATCTTCGTTGTCACTTCCACCAATATTTCTTCTTCTTCAACCCCCCAC
CCTTCTCTCTTTCTTGTTTCTTCTTTGATTGCTAAGTTTTGTTAATTCATTCAATTAGTA
TCGTTGCAAGTAACCAAAGATGATCACACTCGCAGACTTTTACCATGTCATGACTGCAAT
GGTTCCACTTTATGTGGCCATGATCTTAGCTTATGGGTCAGTGAAATGGTGGAAGATTTT
CACTCCTGATCAGTGCTCAGGCATCAACCGTTTTGTTGCTCTCTTTGCAGTCCCCTTGCT
CTCTTTCCATTTCATCTCATCCAACGACCCTTACAAAATGAACTTGAGGTTCATTGCAGC
TGATACTCTTCAAAAAATCATAGTCCTTGTGGTTCTAGCAATTTGGAGCAAGTTGAGCAA
AAGGGGTTGTTTAGAATGGACCATCACTCTATTTTCAGTATCAACTTTACCAAACACTCT
AGTCATGGGCATTCCTTTACTCAAAGGAATGTACGGCGAGTTCTCTGGAAGCTTGATGGT
GCAAATAGTTGTTCTTCAATGCATCATTTGGTACACTTTGATGTTATTCATGTTTGAATA
TAGAGGTGCCAGGTTGCTTATCTCTGAGCAATTCCCAGACACTGCTGGCTCTATTGTCTC
AATACATGTTGATTCTGACATCATGTCACTTGATGGAAGGCAGCCACTTGAAACAGACGC
TGAGATCAAAGAAGATGGAAAGCTTCATGTCACTGTCCGAAAATCAAATGCCTCACGATC
AGACATTTTCTCAAGAAGGTCTCAAGGGCTGTCGTCAACAACTCCACGCCCATCAAACTT
AACGAATGCAGAGATTTACTCTTTGCAGTCATCAAGAAACCCAACACCACGAGGGTCAAG
CTTTAACCACGCTGACTTTTACTCAATGATGGCCGGTGGCCGCAGTTCAAACTTCGGCGC
CACTGACGTGTATGGTCTCTCGGCGACGTCGCGTGGACCCACCCCAAGACCATCTAACTA
TGAAGATGAAGCTAATAATGCTAACAAGTCAAGGTTCCATCACTACCCGGCACCAAATCC
GGGCATGTTTTCTCCAACTAATAATAATACTAGAGTTAATGCCAGTGCAAATAAGAAGGC
TATTAATGGTCAAGCTCAGCAGAAAGGAGAAGATGGTGCTGGAGCTGGAGCTGGAGCTAG
GGATCTTCATATGTTTGTTTGGAGTTCGAGTGCTTCTCCTGTATCTGATGTATTTGGTGG
CCATGATTATAATAATAATGACCACAAAGAAGTGAGATTGGCTGTGTCACCACAAGGAGG
AAAAGGAGAGGGTGGTGGTGGTCATGAAGAGTACATGGAGAGAGAAGATTTTAGCTTTGG
CAACAGAAGAGGATTGGAGAGCAACAACAATGAAGGAGAAAAAGTTGGTGATGAGAAGCC
TAAAGCTATGCCGCCGACAAGTGTAATGACAAGGCTTATACTGATTATGGTTTGGAGAAA
ACTTATCAGAAATCCCAACACTTACTCCAGCTTAATTGGCCTCGTTTGGTCATTAGTTTC
GTTCAGGTACATGACATGTTAG