Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00080.2
CDS Infomation

gene=orange1.1t00080
Sequence

ATGTATGAATTTAGTTCGGCAACGAGAAAGACAATAGCTAGTTTGAATTCAAGCATGGCT
ATGACTTATTATTATGCAACAAAACCAACTTGGAAGATTGTAACAACTGACTGTACTTGC
TCAATTTCAAGCTGCTGCTTTAACTTCTTCTCTAATGTAACCAATCAACACAGCAAAACA
CTCCATTTTACAAATCTGACACACATAATAAAGAACAAGTGCACGTGGGTAATTAAAGCA
AAAGGCAACGATGAAGCCATTGCGCATGTAAAGGAGAAGAAGAACGATAATGCTCAAACA
ACATCAGAGAGTGTTCAGATTATCACAAAGCGGCCTTTCTGGAAAAGGGTTTTGTTTGCA
TCCAAGAAGATCAGGAGTATTTTCTTGCTCAATGTTATCACCATTGTGTATGCAAGCGAT
ATTCCTATTCTAAAAGCTGCTGAGGAGATTATGCATCCAGCATCCTTTTGTGCCGTGCGG
TTTGTCATGTCAGCCATCCCTTTTTTGCCATTTGTGTTCTGGGCACGAGATGATGTAAAG
ACCCGCAATGCGGGAATAGAGCTGGGATTGTGGGTCAGTTTAGGGTACTTTGTTGAGGCA
CTAGGGCTACTGACATCTGATGCTGGGCGTGCATCATTCATTTCTTTGTTTACGGTAATT
GTAGTGCCATTGTTTGATGGCATGTTAGGAGCAATTATACCAGCACATACCTGGTTTGGA
GTTTTAATTTCAGCCCTTGGGGTTGGTATGCTGGAATGCAGTGGATCTCCTCCAAGTGTT
GGAGATTTTTTGAACTTTTTGAGTGCTATCTTTTTTGGAATTCACATGCTCCGAACTGAG
CGTATTTCAAGAAGCACAAAGAAGGAAAACTTCTTACCACTTCTTGGTTATGAGATTTGT
GTTGTTGCTCTGTTGTCTACGATCTGGGTTCTAGTTGGAGGATGGTTTGACAGCAGCCAA
GATTTTGATCAATCACCGTGGACGTGGACTATGCTTTGGGACTGGATGGTCACATTTCCT
TGGGTACCTGCACTTTACACTGGCATCTTTTCAACTGGGATATGCCTGTGGATAGAGATT
GCTGCCATGCGAGATGTTTCAGCAACAGAAACAGCCATAATCTACGGGCTGGAGCCACTA
TGGGGGGCTGGTTTTGCATGGTTTCTGCTCGGTGAAAGATGGAGTACAGCTGGATGGATT
GGAGCTGCTCTTGTGCTTGGTGGAAGCTTGTTGGTGCAGATGTACAGATCTTCCTCCCCC
GATAAATCCCTAAAGGCTGAAGAATGTACTAAGACCGGCAGTCTACTGCTGATACCTGAA
CTGGATAAGGAAAAACTGCAAAACAATCTTTCCACGACACCAGTGGCTGTCAGATCCAAA
AAGGACATGACAGATATGTTGAAGTGA

Peptide Sequence

PEP ID

orange1.1t00080.2
PEP Infomation
Sequence

MYEFSSATRKTIASLNSSMAMTYYYATKPTWKIVTTDCTCSISSCCFNFFSNVTNQHSKT
LHFTNLTHIIKNKCTWVIKAKGNDEAIAHVKEKKNDNAQTTSESVQIITKRPFWKRVLFA
SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK
TRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFG
VLISALGVGMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEIC
VVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEI
AAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQMYRSSSP
DKSLKAEECTKTGSLLLIPELDKEKLQNNLSTTPVAVRSKKDMTDMLK*

Transcript Sequence

Transcript ID

orange1.1t00080.2
Transcript Infomation

gene=orange1.1t00080 CDS=45-1451
Sequence

ATTACTTAATAATATCACTTATTTTCTAATTGCTGAACATTGCCATGTATGAATTTAGTT
CGGCAACGAGAAAGACAATAGCTAGTTTGAATTCAAGCATGGCTATGACTTATTATTATG
CAACAAAACCAACTTGGAAGATTGTAACAACTGACTGTACTTGCTCAATTTCAAGCTGCT
GCTTTAACTTCTTCTCTAATGTAACCAATCAACACAGCAAAACACTCCATTTTACAAATC
TGACACACATAATAAAGAACAAGTGCACGTGGGTAATTAAAGCAAAAGGCAACGATGAAG
CCATTGCGCATGTAAAGGAGAAGAAGAACGATAATGCTCAAACAACATCAGAGAGTGTTC
AGATTATCACAAAGCGGCCTTTCTGGAAAAGGGTTTTGTTTGCATCCAAGAAGATCAGGA
GTATTTTCTTGCTCAATGTTATCACCATTGTGTATGCAAGCGATATTCCTATTCTAAAAG
CTGCTGAGGAGATTATGCATCCAGCATCCTTTTGTGCCGTGCGGTTTGTCATGTCAGCCA
TCCCTTTTTTGCCATTTGTGTTCTGGGCACGAGATGATGTAAAGACCCGCAATGCGGGAA
TAGAGCTGGGATTGTGGGTCAGTTTAGGGTACTTTGTTGAGGCACTAGGGCTACTGACAT
CTGATGCTGGGCGTGCATCATTCATTTCTTTGTTTACGGTAATTGTAGTGCCATTGTTTG
ATGGCATGTTAGGAGCAATTATACCAGCACATACCTGGTTTGGAGTTTTAATTTCAGCCC
TTGGGGTTGGTATGCTGGAATGCAGTGGATCTCCTCCAAGTGTTGGAGATTTTTTGAACT
TTTTGAGTGCTATCTTTTTTGGAATTCACATGCTCCGAACTGAGCGTATTTCAAGAAGCA
CAAAGAAGGAAAACTTCTTACCACTTCTTGGTTATGAGATTTGTGTTGTTGCTCTGTTGT
CTACGATCTGGGTTCTAGTTGGAGGATGGTTTGACAGCAGCCAAGATTTTGATCAATCAC
CGTGGACGTGGACTATGCTTTGGGACTGGATGGTCACATTTCCTTGGGTACCTGCACTTT
ACACTGGCATCTTTTCAACTGGGATATGCCTGTGGATAGAGATTGCTGCCATGCGAGATG
TTTCAGCAACAGAAACAGCCATAATCTACGGGCTGGAGCCACTATGGGGGGCTGGTTTTG
CATGGTTTCTGCTCGGTGAAAGATGGAGTACAGCTGGATGGATTGGAGCTGCTCTTGTGC
TTGGTGGAAGCTTGTTGGTGCAGATGTACAGATCTTCCTCCCCCGATAAATCCCTAAAGG
CTGAAGAATGTACTAAGACCGGCAGTCTACTGCTGATACCTGAACTGGATAAGGAAAAAC
TGCAAAACAATCTTTCCACGACACCAGTGGCTGTCAGATCCAAAAAGGACATGACAGATA
TGTTGAAGTGATTCCTTTCCTTGCTCTTCTACTTGTATGTCCATGTATAACCGATAAACT
TTCTATATTAATTA