Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00030.1
CDS Infomation

gene=orange1.1t00030
Sequence

ATGCTTTCTTTAAGTGATTTTTGGAGAAGGCATAGAAGGAAGATTTTTATTACAACAGGT
GTTTTAGGAGGTGGGTATCTTCTATATAAATTATATGATTCACAGCGGAGGATTGCTGAT
CTTGACAGACAACAGTGTGAGCATGATGAGCTCCTTAAGGCCCAAATGCAAGCGCATTAT
GAGGAGGTTCAGAGAATAGCTGATGCAACAACATTGCCCCATGCAATGCACTATTTAAGC
ATTCGGATAGCCGAAGAGCTGGATCTTTCTCCACTGACTGATAAACTATTGAGGGGAAAG
GAACAGCCATACACTTTATCATCTTCAGAGAAACTTGAGCTATGGGATAGACTCAAAATT
TTAAGTTTCACAAAACTTGTGGTGGCACTGTGGGCAGTGACAATGGTTAGCTTATATATT
AGAGTTCAGGTTAACATCCTAGGTAGACATTTATATATTGACACTGCTCGAGGCCTTGGA
AGCTCCGATTTACCTGAGGATGCTGATCTCATTGACAGGGATGACCAGCAGAAGTTTCTG
GCCAGTGTCGATTATCTTGCCAATTATGGCATGCAGGCAATGATTTCTAATGTTCAGGCA
GCAGCAGATGAAGCATTGAAGGGAAAGCAATTGAGGGATATCTTTAACACTGTGGTGCTT
CATGAAACTTTCATGCAAATACTTGAGGTGTTCATGAGCATGGGAAGTCCTCATCAATGG
GTGGACTTCTTGATGCCTCAGGATATTAGGTTCTACAAACTAGTTACAGCCTCCGGTCAT
GATGAGACAACTCTTTCTGGTGCTACCAAATTTGATGAACTTATGGTAGAGACACGAGCT
GTGTTATCGAGTGCTGAATATACGAGTGTTGTTGATATGTCATTCAAAGCGGCAGTGGAT
GCCCTGATAGATGAAATGAGGGTACAATCAGGAGGTAGTCTAATATCAGGGATGCCACTG
GCTAAACTTGTGCCACGAGTTGTGCAGATGAGTCCATCTCTGCTTGCGGAGCCAAGCAAC
AACAGAATTATCCAAGTCATCAGAACCATACCGGAAGTTGAACTCTTCTTCACTCTCCTC
TATGCAAATATGTCGGACTCGTAG

Peptide Sequence

PEP ID

orange1.1t00030.1
PEP Infomation
Sequence

MLSLSDFWRRHRRKIFITTGVLGGGYLLYKLYDSQRRIADLDRQQCEHDELLKAQMQAHY
EEVQRIADATTLPHAMHYLSIRIAEELDLSPLTDKLLRGKEQPYTLSSSEKLELWDRLKI
LSFTKLVVALWAVTMVSLYIRVQVNILGRHLYIDTARGLGSSDLPEDADLIDRDDQQKFL
ASVDYLANYGMQAMISNVQAAADEALKGKQLRDIFNTVVLHETFMQILEVFMSMGSPHQW
VDFLMPQDIRFYKLVTASGHDETTLSGATKFDELMVETRAVLSSAEYTSVVDMSFKAAVD
ALIDEMRVQSGGSLISGMPLAKLVPRVVQMSPSLLAEPSNNRIIQVIRTIPEVELFFTLL
YANMSDS*

Transcript Sequence

Transcript ID

orange1.1t00030.1
Transcript Infomation

gene=orange1.1t00030 CDS=494-1597
Sequence

AAAATATTGGAAATATCAATCTAGACAGTAGCATTGGGATGTTGGCAGACACTGCCTTTT
AGAGTTAAAGAACTGAGTCGAGTCGAGTCGAGTTGAAGAGAGACAAGTACAGAAAAGGGG
TAACAAATCAGACAGCAAGCAAGTCTCACGCAACAACGTATGACAACTTTGGCTGCCCAT
TCATTATTCATTCATTCAATTCATTAGAGAATTTTTTGTTTTACCCCCTCTCTCTAAACT
TGCTCCCTCTTTAAAACCCTCAAATAATTTTTTGAAGATAAAAAAGTATATATATTATAA
AACCTTGAGTCAAAATCCACTTCTATTTTTCAATTGGCGGGTCTTCCTAGGGCTTTGCTT
CTTCTAAGAGCCTCCTTCACTAACAAGGAGGCTTTTGTTGTTTCTACTTTGCCCACTCGT
CCTAATGGGTTTGCTTCAACCGTACGCTCAGTGATAGTGATGGATTTTTGGGTTACTTAG
CATAATAATAAAAATGCTTTCTTTAAGTGATTTTTGGAGAAGGCATAGAAGGAAGATTTT
TATTACAACAGGTGTTTTAGGAGGTGGGTATCTTCTATATAAATTATATGATTCACAGCG
GAGGATTGCTGATCTTGACAGACAACAGTGTGAGCATGATGAGCTCCTTAAGGCCCAAAT
GCAAGCGCATTATGAGGAGGTTCAGAGAATAGCTGATGCAACAACATTGCCCCATGCAAT
GCACTATTTAAGCATTCGGATAGCCGAAGAGCTGGATCTTTCTCCACTGACTGATAAACT
ATTGAGGGGAAAGGAACAGCCATACACTTTATCATCTTCAGAGAAACTTGAGCTATGGGA
TAGACTCAAAATTTTAAGTTTCACAAAACTTGTGGTGGCACTGTGGGCAGTGACAATGGT
TAGCTTATATATTAGAGTTCAGGTTAACATCCTAGGTAGACATTTATATATTGACACTGC
TCGAGGCCTTGGAAGCTCCGATTTACCTGAGGATGCTGATCTCATTGACAGGGATGACCA
GCAGAAGTTTCTGGCCAGTGTCGATTATCTTGCCAATTATGGCATGCAGGCAATGATTTC
TAATGTTCAGGCAGCAGCAGATGAAGCATTGAAGGGAAAGCAATTGAGGGATATCTTTAA
CACTGTGGTGCTTCATGAAACTTTCATGCAAATACTTGAGGTGTTCATGAGCATGGGAAG
TCCTCATCAATGGGTGGACTTCTTGATGCCTCAGGATATTAGGTTCTACAAACTAGTTAC
AGCCTCCGGTCATGATGAGACAACTCTTTCTGGTGCTACCAAATTTGATGAACTTATGGT
AGAGACACGAGCTGTGTTATCGAGTGCTGAATATACGAGTGTTGTTGATATGTCATTCAA
AGCGGCAGTGGATGCCCTGATAGATGAAATGAGGGTACAATCAGGAGGTAGTCTAATATC
AGGGATGCCACTGGCTAAACTTGTGCCACGAGTTGTGCAGATGAGTCCATCTCTGCTTGC
GGAGCCAAGCAACAACAGAATTATCCAAGTCATCAGAACCATACCGGAAGTTGAACTCTT
CTTCACTCTCCTCTATGCAAATATGTCGGACTCGTAGATTGGTGAGCTTTGTCTTCTGTT
TGGTCTTTTCGTTTCCATACAAGAGAAACATCAATGTAAAGATTTTAAATTGGGGCTAGG
TTTGCAATCTAAAGATTCAAGGTGAAAGAATAAGAAAAGTTAAAAAATGAAAAACTTGGA
TTTCTTCATTAATTTATGTTGATTATTCTGTGCTGCTAAATCTTCCCCATTATACCTTGT
GAATGATGATAAGCTTAAACTTTGTGTTTTGGATTTTACCATTATCTAGTGCAATGGGAA
TTTTCTGGACCCACAAGTTCGATTGCCCTTCTTGCTCAATTGCTCTTGGTTTATGTAAGT
TTTCTCTTATTAGAATGTTCATATCATTTGGCTGTTCTGTACAGAACGTTGACATTGGAA
ACTTGAGCTTCGGTGTTAATAGATTGGTCCTAAAATCAGCTGCCAAATTCT