Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs9g16940.1
CDS Infomation

gene=Cs9g16940
Sequence

ATGGCTGGCCCTAAACCTTCAAAACCCTCTATCATAAGAACAAACGTATACTCATTAACC
CTAATTCTCTTTCTCTGTATTTTCTCCTACCTATTCGGTCTCTGGCAGCACGGGGGCCCC
ACGCCCCTCCTCCCCGCCACCACCAGCACCACCACCGTCGTCGATATCGCCTGCTCAACA
GCAACAGCAACAGCAACCGCCCCGAAAACCATAGATTTCACAGCCCATCACGTGGCGGCC
ACGTCATCGGAGGCTGTGATGAAAACTTACCCTCTGTGCAACATCTCATACAGTGAGTAC
ACTCCGTGCCAGGACGGAAAACGATCCTTGAAATTTAGCAGGCGCAGGCTGATATACAGA
GAGAGGCATTGTCCGGCGAAGAGCGAGCTGCTGAAGTGCCGCGTGCCGGCGCCCTACGGC
TACAGGAACCCGTTTGCGTGGCCGACGAGCAGGGATCTGGTGTGGTATGCTAATGTGCCG
CACAAGGAGTTGACGGTGGAGAAGGCGGTGCAGAATTGGATCAGATACGAAGGTGATCGG
TTTAGATTCCCTGGGGGAGGCACCATGTTCCCTAATGGTGCTGACGCTTATATCGATGAT
ATTGGCAAGTTGATCAATCTCAATGATGGCTCTATACGTACCGCCATTGATACTGGTTGT
GGGGTGGCAAGTTGGGGGGCGTATCTTCTGTCACGCAACATCATAACAATGTCATTTGCA
CCAAGGGACACGCATGAAGCTCAAGTTCAATTCGCTTTAGAGCGTGGGGTGCCTGCTTTA
ATTGGAGTCCTCGCCGCTGAGAGGCTTCCTTATCCGTCCAGAGCTTTTGATATGGCCCAT
TGCTCTCGCTGCCTTATTCCTTGGAACCAATTCGGTGGGATTTATTTGATAGAAGTTGAT
CGAGTGCTACGACCTGGAGGGTACTGGATTTTATCTGGCCCTCCGATTAATTGGAAGAAG
CATGCGAGAGGCTGGCAAAGAACAAAAGAGGATTTGAATAAGGAACAAACTGCTATTGAA
AATGTAGCTAAGAGCCTTTGCTGGGAAAAAATAAAGGAGAAAGGCGATATTGCTATCTGG
CGAAAGCCTATTAATCATTTGAACTGTAAAACAAATCAAAAACTCTCTCAGAATCCACCT
TTCTGCCCGGTTCAGGATCCAGATAAAGCCTGGTACACACAAATGGGTACTTGTTTGACT
CGTTTACCTGAAGTTTCAAGTGATCGGGAGACTGCTGGGGGTGAATTGGCAAAATGGCCC
CAGAGACTCAATGCAGTCCCACCAAGGATTAGTAAAGGAACTGTGAAAGGGATCACTCCT
GAGATCTTTCAGCAAAATTCTGAGCTATGGAAGAAGAGATTGTCGTATTATAAAACAATG
AACAATCAATTAGGCCAATCCGGACGGTACCGTAACATACTAGACATGAATGCTCACTTG
GGAGGTTTCGCTGCTGCTCTTATTGATTTCCCGGTTTGGGTCATGAATGTTGTTCCTGCT
GAGGCTAAAATCAACACTCTTGGAGTCATATACGAAAGAGGCCTAGTCGGAACATATACC
AATTGGTGTGAGGCAATGTCAACTTATCCTAGAACTTATGACCTTATTCATGCTGATTCT
GTGTTTAGTCTCTACAAAGACCGATGTGAAACGGAAGATATTTTGCTAGAAATGGATCGG
ATTCTAAGACCCGAAGGGGGTGTAATCTTCAGAGACGACGTTGATGAGTTGGTGAAGGTG
AAGAGGATCATTGATGCATTGAAATGGCAAAGCCAAATTGTTGATCATGAAGATGGACCT
CTGGAGAGGGAAAAGCTTCTGTTTGCTGTTAAATTATATTGGACTGCGCCCGCTGAAGAA
ACTGCCTCTGAATCTTCATAA

Peptide Sequence

PEP ID

Cs9g16940.1
PEP Infomation
Sequence

MAGPKPSKPSIIRTNVYSLTLILFLCIFSYLFGLWQHGGPTPLLPATTSTTTVVDIACST
ATATATAPKTIDFTAHHVAATSSEAVMKTYPLCNISYSEYTPCQDGKRSLKFSRRRLIYR
ERHCPAKSELLKCRVPAPYGYRNPFAWPTSRDLVWYANVPHKELTVEKAVQNWIRYEGDR
FRFPGGGTMFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSRNIITMSFA
PRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVD
RVLRPGGYWILSGPPINWKKHARGWQRTKEDLNKEQTAIENVAKSLCWEKIKEKGDIAIW
RKPINHLNCKTNQKLSQNPPFCPVQDPDKAWYTQMGTCLTRLPEVSSDRETAGGELAKWP
QRLNAVPPRISKGTVKGITPEIFQQNSELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHL
GGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADS
VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQIVDHEDGP
LEREKLLFAVKLYWTAPAEETASESS*

Transcript Sequence

Transcript ID

Cs9g16940.1
Transcript Infomation

gene=Cs9g16940 CDS=220-2100
Sequence

CTACTTTCCTTTTTTTTCCATTTCATTTAAACTCAAATCTCCCCTCTCTCTCTCTCTCGC
CATCACCATTAGAATTTTTCGAAAGTACACTCATCGCCCACATGATTTAACTTGGTCTTA
AACCAAATCTTCATCAACCCTTGTGGTCAAATATTGAATCCATATATACACACACGGTCG
TTAGAAGATCATACAATAACCAAGCCCCATTAGCCATCCATGGCTGGCCCTAAACCTTCA
AAACCCTCTATCATAAGAACAAACGTATACTCATTAACCCTAATTCTCTTTCTCTGTATT
TTCTCCTACCTATTCGGTCTCTGGCAGCACGGGGGCCCCACGCCCCTCCTCCCCGCCACC
ACCAGCACCACCACCGTCGTCGATATCGCCTGCTCAACAGCAACAGCAACAGCAACCGCC
CCGAAAACCATAGATTTCACAGCCCATCACGTGGCGGCCACGTCATCGGAGGCTGTGATG
AAAACTTACCCTCTGTGCAACATCTCATACAGTGAGTACACTCCGTGCCAGGACGGAAAA
CGATCCTTGAAATTTAGCAGGCGCAGGCTGATATACAGAGAGAGGCATTGTCCGGCGAAG
AGCGAGCTGCTGAAGTGCCGCGTGCCGGCGCCCTACGGCTACAGGAACCCGTTTGCGTGG
CCGACGAGCAGGGATCTGGTGTGGTATGCTAATGTGCCGCACAAGGAGTTGACGGTGGAG
AAGGCGGTGCAGAATTGGATCAGATACGAAGGTGATCGGTTTAGATTCCCTGGGGGAGGC
ACCATGTTCCCTAATGGTGCTGACGCTTATATCGATGATATTGGCAAGTTGATCAATCTC
AATGATGGCTCTATACGTACCGCCATTGATACTGGTTGTGGGGTGGCAAGTTGGGGGGCG
TATCTTCTGTCACGCAACATCATAACAATGTCATTTGCACCAAGGGACACGCATGAAGCT
CAAGTTCAATTCGCTTTAGAGCGTGGGGTGCCTGCTTTAATTGGAGTCCTCGCCGCTGAG
AGGCTTCCTTATCCGTCCAGAGCTTTTGATATGGCCCATTGCTCTCGCTGCCTTATTCCT
TGGAACCAATTCGGTGGGATTTATTTGATAGAAGTTGATCGAGTGCTACGACCTGGAGGG
TACTGGATTTTATCTGGCCCTCCGATTAATTGGAAGAAGCATGCGAGAGGCTGGCAAAGA
ACAAAAGAGGATTTGAATAAGGAACAAACTGCTATTGAAAATGTAGCTAAGAGCCTTTGC
TGGGAAAAAATAAAGGAGAAAGGCGATATTGCTATCTGGCGAAAGCCTATTAATCATTTG
AACTGTAAAACAAATCAAAAACTCTCTCAGAATCCACCTTTCTGCCCGGTTCAGGATCCA
GATAAAGCCTGGTACACACAAATGGGTACTTGTTTGACTCGTTTACCTGAAGTTTCAAGT
GATCGGGAGACTGCTGGGGGTGAATTGGCAAAATGGCCCCAGAGACTCAATGCAGTCCCA
CCAAGGATTAGTAAAGGAACTGTGAAAGGGATCACTCCTGAGATCTTTCAGCAAAATTCT
GAGCTATGGAAGAAGAGATTGTCGTATTATAAAACAATGAACAATCAATTAGGCCAATCC
GGACGGTACCGTAACATACTAGACATGAATGCTCACTTGGGAGGTTTCGCTGCTGCTCTT
ATTGATTTCCCGGTTTGGGTCATGAATGTTGTTCCTGCTGAGGCTAAAATCAACACTCTT
GGAGTCATATACGAAAGAGGCCTAGTCGGAACATATACCAATTGGTGTGAGGCAATGTCA
ACTTATCCTAGAACTTATGACCTTATTCATGCTGATTCTGTGTTTAGTCTCTACAAAGAC
CGATGTGAAACGGAAGATATTTTGCTAGAAATGGATCGGATTCTAAGACCCGAAGGGGGT
GTAATCTTCAGAGACGACGTTGATGAGTTGGTGAAGGTGAAGAGGATCATTGATGCATTG
AAATGGCAAAGCCAAATTGTTGATCATGAAGATGGACCTCTGGAGAGGGAAAAGCTTCTG
TTTGCTGTTAAATTATATTGGACTGCGCCCGCTGAAGAAACTGCCTCTGAATCTTCATAA
TAAAGCTTTTTTACTTTGTAGTTGTATTTTTCGTTATTCTTTTTCTTTTAACTCATTCTT
TCAGATTAGTTCATTAATTGCAACCAATCTGGCTTATAAAATGCTTGCATTTTGCGTCCC
TTTTCATAAAATAAAACAAATCATAGTTTCAGC