Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs9g16620.1
CDS Infomation

gene=Cs9g16620
Sequence

ATGGGCTTGCAGTTTTGGAGATTTGCTGTGATCATTTTCTTGTTTCACGGCTTCTGTTTC
GCAGAGAAAGCTCCATACTATACGTTTGTCAAAGATGCAACCTCAGCTCCACTAATCTCG
TACTACGACTACATAATCGTCGGAGGAGGAACATCGGGGTGTCCTTTAGCAGCAACCCTA
TCGCAAAACGCCACCGTTTTACTCCTCGAAAAAGGGGGCTCCCCTTATGAAAACCCTAAT
ATTACAGACACGGGCAACTTTGCCACCACCCTTTTGGACCCTTCACCTACATCACCTTCA
CAACAATTCATCTCCGAGGACGGTGTGTACAACGCCCGTGCGCGTGTCCTTGGCGGCGGG
AGTGTCATCAACGCGGGGTTCTACACGCGGGCGAGTTTGAGATACGTGCGAGAAGTGGGC
TGGACAGAGAGCTTGGTGAACAGCTCTTACGAGTGGGTTGAAAAGAAGGTGGCGCATGAG
CCACCGATGCTGCAGTGGCAATCCGCCGTGAGAGATGGGTTGCTTGAGGCGGGGGTGTTG
CCCTACAATGGGTTTACGTTTGATCATATTTATGGGACCAAGGTTAGTGGGACAATCTTT
GATGAGGATGGACATAGACACAGTGCTGCTGATTTGTTAGAGTATGCTGATCCTGAGAAA
CTTACAGTTTATTTGCGTGCTGTTGTGCAAAGGATCAAGTTTACAGAGACTGGGAGAGCA
AAGCCAACGGCTCACTGTGTAACTTTTTATGATCATGTTGGAGCAAGGCATAGAGCATGC
CTAAACAATGGAGGGAAGAATGAGATAATCTTATCAGCTGGTGCAATCGGAAGCCCACAG
CTGTTGATGCTGAGCGGCGTCGGACCCGCCAATGAGCTTCGGAAACGTGGCATCAGAGTG
GTGGTGGACCAGCCTAACGTGGGCCAAGGGATGTCCGATAATCCGATGAATGCCCTCTTC
GTTCCCTCTGCTCGCCCTGTTGAGGTCTCATTGGTTCAAGTTGTGGGCATCACCAGGTTT
GATAGCTACATTGAAACAGCAAGTGGTTTAAGCCTTGCTCCCTCTTGGGCTCAAGGGCTA
ACCAGAGACTACAGCTCGTTCCTAAATAAGACAGACATACCCTCATTGGTGACACCAGAA
ACAGTGGCCGAAGCAGTAGAAACAGTTAACTCGTATCTCAATGGAACAATAAGAGCCGGA
GTCATAGTAGAAAAGATAATGGGGCCGAGGTCCACAGGCCACCTTCGCCTCCGAACCTTG
GACGCAGACGATAACCCTTCAGTAACATTCAACTATTTCCAGGAACCCGAAGACTTGGTA
AGATGCGTCCAGGGAATGCGCACAATCATCGACGTTTTGAATTCCAGGGCCCTCTCCAAG
TTCCGATACCCCGACGTGTCGGTGCAGGAGTTGATCGATTTAATGGTGAACATTCCCACA
AACCTCAGACCGAGACACGTCGTTGGTGCTTCAATTTCCTTGGAGCAGTTCTGCAGGGAC
ACTGTGATGACCATTTGGCATTACCATGGCGGCTGCCAAGTTGATAGAGTTGTTGATCGC
GATTACAAAGTTCTCGGTGTTGATGGCTTGAGGGTGATTGATGGTTCCACGTTTTATAAT
TCCCCCGGAACGAATCCTCAGGCTACTTGTATGATGCTCGGAAGGTACATGGGGTTGAGG
ATTCTGCAAGACAGAGACAGGATTTCCTTTTAA

Peptide Sequence

PEP ID

Cs9g16620.1
PEP Infomation
Sequence

MGLQFWRFAVIIFLFHGFCFAEKAPYYTFVKDATSAPLISYYDYIIVGGGTSGCPLAATL
SQNATVLLLEKGGSPYENPNITDTGNFATTLLDPSPTSPSQQFISEDGVYNARARVLGGG
SVINAGFYTRASLRYVREVGWTESLVNSSYEWVEKKVAHEPPMLQWQSAVRDGLLEAGVL
PYNGFTFDHIYGTKVSGTIFDEDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTETGRA
KPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRV
VVDQPNVGQGMSDNPMNALFVPSARPVEVSLVQVVGITRFDSYIETASGLSLAPSWAQGL
TRDYSSFLNKTDIPSLVTPETVAEAVETVNSYLNGTIRAGVIVEKIMGPRSTGHLRLRTL
DADDNPSVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALSKFRYPDVSVQELIDLMVNIPT
NLRPRHVVGASISLEQFCRDTVMTIWHYHGGCQVDRVVDRDYKVLGVDGLRVIDGSTFYN
SPGTNPQATCMMLGRYMGLRILQDRDRISF*

Transcript Sequence

Transcript ID

Cs9g16620.1
Transcript Infomation

gene=Cs9g16620 CDS=145-1857
Sequence

CACCGTTTAGACAGCTGGGAGCATGGCCAGCATTTTAAAGTGTGGTAGATTTGTTTCTGG
TTCTTTAAATCAAGACCAAGATTCCATATATCTGTCAGTAAGTTAAAGATATTACAATTT
AGAATTGTAAGTTAGATAAAAATTATGGGCTTGCAGTTTTGGAGATTTGCTGTGATCATT
TTCTTGTTTCACGGCTTCTGTTTCGCAGAGAAAGCTCCATACTATACGTTTGTCAAAGAT
GCAACCTCAGCTCCACTAATCTCGTACTACGACTACATAATCGTCGGAGGAGGAACATCG
GGGTGTCCTTTAGCAGCAACCCTATCGCAAAACGCCACCGTTTTACTCCTCGAAAAAGGG
GGCTCCCCTTATGAAAACCCTAATATTACAGACACGGGCAACTTTGCCACCACCCTTTTG
GACCCTTCACCTACATCACCTTCACAACAATTCATCTCCGAGGACGGTGTGTACAACGCC
CGTGCGCGTGTCCTTGGCGGCGGGAGTGTCATCAACGCGGGGTTCTACACGCGGGCGAGT
TTGAGATACGTGCGAGAAGTGGGCTGGACAGAGAGCTTGGTGAACAGCTCTTACGAGTGG
GTTGAAAAGAAGGTGGCGCATGAGCCACCGATGCTGCAGTGGCAATCCGCCGTGAGAGAT
GGGTTGCTTGAGGCGGGGGTGTTGCCCTACAATGGGTTTACGTTTGATCATATTTATGGG
ACCAAGGTTAGTGGGACAATCTTTGATGAGGATGGACATAGACACAGTGCTGCTGATTTG
TTAGAGTATGCTGATCCTGAGAAACTTACAGTTTATTTGCGTGCTGTTGTGCAAAGGATC
AAGTTTACAGAGACTGGGAGAGCAAAGCCAACGGCTCACTGTGTAACTTTTTATGATCAT
GTTGGAGCAAGGCATAGAGCATGCCTAAACAATGGAGGGAAGAATGAGATAATCTTATCA
GCTGGTGCAATCGGAAGCCCACAGCTGTTGATGCTGAGCGGCGTCGGACCCGCCAATGAG
CTTCGGAAACGTGGCATCAGAGTGGTGGTGGACCAGCCTAACGTGGGCCAAGGGATGTCC
GATAATCCGATGAATGCCCTCTTCGTTCCCTCTGCTCGCCCTGTTGAGGTCTCATTGGTT
CAAGTTGTGGGCATCACCAGGTTTGATAGCTACATTGAAACAGCAAGTGGTTTAAGCCTT
GCTCCCTCTTGGGCTCAAGGGCTAACCAGAGACTACAGCTCGTTCCTAAATAAGACAGAC
ATACCCTCATTGGTGACACCAGAAACAGTGGCCGAAGCAGTAGAAACAGTTAACTCGTAT
CTCAATGGAACAATAAGAGCCGGAGTCATAGTAGAAAAGATAATGGGGCCGAGGTCCACA
GGCCACCTTCGCCTCCGAACCTTGGACGCAGACGATAACCCTTCAGTAACATTCAACTAT
TTCCAGGAACCCGAAGACTTGGTAAGATGCGTCCAGGGAATGCGCACAATCATCGACGTT
TTGAATTCCAGGGCCCTCTCCAAGTTCCGATACCCCGACGTGTCGGTGCAGGAGTTGATC
GATTTAATGGTGAACATTCCCACAAACCTCAGACCGAGACACGTCGTTGGTGCTTCAATT
TCCTTGGAGCAGTTCTGCAGGGACACTGTGATGACCATTTGGCATTACCATGGCGGCTGC
CAAGTTGATAGAGTTGTTGATCGCGATTACAAAGTTCTCGGTGTTGATGGCTTGAGGGTG
ATTGATGGTTCCACGTTTTATAATTCCCCCGGAACGAATCCTCAGGCTACTTGTATGATG
CTCGGAAGGTACATGGGGTTGAGGATTCTGCAAGACAGAGACAGGATTTCCTTTTAAAAA
AAATTATAAACTGAAGACTTAAAAATTGGATTTGAAGTTGGCTAATTATTTATGTTAATT
AATGGAATTATGCATTGGTTCAGTCATGTTGAAGGATGTATATTAGAGTTTTAAGTCTTG
TTAATGACTTTAAGAAGTGGGAGGGAATATGCAGATTATTTCATTGCTATGTTACCCGTT
ACTTATGTGGTAAATGAATAAAATGTATTTTTTTTTTGTCTGAACCACGAAGTGGTCTTG
AGTGGGCCCCAACTATTGG