Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs9g16440.1
CDS Infomation

gene=Cs9g16440
Sequence

ATGGGTGACAACAAAGGAGATACAACCAAGAAGCAAAAATCACAACAACCTCAACAGCTG
CAGCAGCAGCAACAGCAACCTCAGCAGCAACAACTTTCATCCTCCCCGAAAAATCCACTT
GAGGAGTCAACTGAAAAAGGCCAGCACCATCACCAACAGCCGCCGGCAGTTGTGGTCACC
GGAGCTCCGTACATCTCTGCTCCTTTGTATGTTCCTATTGGTCCAACTTCTTCCTCTCCA
TTTGAGCAACAATTTGAGCCAGTAAATCCCAAAAGGCAACGATATAATAGCAGCCAATGG
AAGCTTTTACCATCACCATCTCAACAGCAACAACAAAAGCAACAAGCCCAAATGGCTATA
CTCACCACAGAATCAAGCCCATCACCAACCACACTCCCAATAACCAACCCACAAAGCCAA
GCTCATACCACCACGGCTTCCTCTTCAGACACAGCATCATCTCCTCCTCACTCACCTATT
CCTTCTCTCTCAGCAGCTTCTGGTCAAGAGACAAACAGGCCAGAATTACTGGGTGAGCAA
TTTCACCCCCAGTTCAGAAAAGGCAAGTATGTAAGCCCAGTTTGGAAACCAAACGAGATG
CTGTGGCTAGCTAGGGCTTGGAGGATTCAGTACCAAGGTGGTGGTGGATCCAACGGCTCT
GGATCTTCCTCAAGAGTTGATCATCATCAGCCAGAGAGTACTGGTCAGGGAGAAGTTGCT
GCTGCTGCCCAATCAACGAGAGCAAAAACTAGGGCTGATAAAGACAGAGAAGTTGCAGAG
TTCTTGCAAAGACATGGAGTGAATAGAGATGCTAAAACATCTGGGACCAAGTGGGATAAC
ATGTTGGGTGAATTTAGAAAGGTTTACGAATGGGAGAGAGGCGGTGAAAGAGAACAAGTT
GGTAAGAGTTACTTCAGACTCTCTCCATATGAGAGGAAATTACACAGGCTGCCAGCTTCA
TTTGATGAAGAAGTATTTGAAGAATTGTCTCAGTTCATGGGGTCTCGCATGAGATCAACA
TCTCAAAGCAGAGCAGCTTCTTCTGTTTTTGTTTCAAGTGATCATGACAATAGATCAACC
AGAGCTCTTCCTCCTCCCCCTCCTTTCAAAGAAGATGAGCTCTCTCTCTCTGCGAGGGCA
AAGCAACTGGTGATGACAAGTGGGGGGGAAGCTTTTTTCCATGGTGGAAGAGGGAGCTTG
TTAGGGTTCGAGTCTTCACTAGATGTGGGTTCCAAGGAACTCAGAAGAATAGGCAGAATA
AGAATGACATGGGAGGAGTCAGTGAGCTTGTGGGCAGAAGAAGGTGAGCATCAAAGAGGA
AGAATAAAGCTTCAAGGGTCAAGCTTTTTGAATGCGGACGAGCTCACTTTCTTTGATGAC
GCTATGGTTGCTTGCAACATGGAAGCTTTCGAAGAAGGAACTCTTAGAGGTTTCTCTGTT
GATAGATTCGTTCCTGGACAGCAAGTCAAAGTCTTTGGCAGAAGAAAGTCTTCCTCAGGC
TCAGCTTCTGCTTCTTCTGCTGGTTTCTTTGAAAGAGTTCAGTTCCCATTCACTGAACCC
TCCATAAGATTTACTCCATGGGAGTATCAGGATCCAAGTGACTACTACGTGGGATGTCTT
CGTGTCCCGCCGACAACACTACCTAGCTTGTTCGAGCTTTCATGGCATTTACAAGAGCCA
CCACCCGAGGAATTTCGTTTCCCAATTAGAAAAGATGTTTATAGAGACTTACCGCAAGGG
AAAGAAATTTTCTTTACTACTTCAACTGAATTGTTAGATTGTAGGGCCATTACATACGAT
ATTTTAAGCCCCATTGTTCGTGGTAATAACCCTAGTCTTAGTTTTTCAACCGCCGCTAGT
AGAGATTCCTTCATTGGCCTTTGGGATGATTGCATCAATAGGGTTGTTTCCAAATTCTGT
TCTTCTGAAATGGTCATTGTACGGAAACCTTCTTCTTCATCAATATCATCACCAGAGCCA
TTGCAGGACCAATGGCCAAACGTGACGGGGTTTGTTAGAAATCTTTGTTTGTGGAGAGGA
GAAGAGACCGATCAATTGAAAGAAGGCCAACTTGATCCTTCATCTTCAATTGTGGAGAAG
CTACTATGGACTTACATGGACCTTCCGTATTTGTTTGGCTACTATGCGGTCGGCTACATA
GTAACATTCTGTGCATTGAGTCGATCACAAGACCGTGTTGTGAGAACAGATTTGTATTCA
CTAGACTTGTCTTCACCAGTTGAGAGGCTCAAAGCCCTAATCCCATGTTACAGAATAGCA
GGCCTGTTGCCTTTGTTAGCCGATCGTTGCTTCAACAGCAGCAGCAGCATTATTAGCAAC
GGCGGCGGTGGTTACAAGCAGTACCCTTTCAGTGATTTCGAAAGAATCGATTTGGGCAGC
GGTAACATCATCGAAATGACACCAAACACAGTCACTAGATTTTTCTCGAGCAAGAGAAAA
TGGGCAGCGGTGAAACAGATATACGATTTCTTAGACCACAGAATCCCGCACGCAGAGGCC
ATATACGAGTCATCAGAGAAAGATTTGGCATTGGTGTTCAAGCCAAGAGGGTGCAAACTG
AAGCCCACGAGTTGTGAGCAACTCGTGGAGGCACTCAAATACGTGACCAAAGCACTAGTA
GCGTTACACGATCTATCTTTCATGCACAAGGACCTGAGTTGGGATAAAGTGATGAGAAGA
AGCGATAGGGAAAACGAGTGGTTCGTAAGTGGGTTCGATGAGGCAGCGAGCGCGCCGCAG
ATATACCCACAGTTGGTGGCGGCGGTGGCGGGAGGAGTGGAGGCGCGTGGGAGGCACGCA
CCGGAGATGGGGAGGCCCGGGTTGCATGGAGTGAAAGTTGACGTATGGGGAGTGGGGCAG
TTGGTGAAAACATGCGGGCTGAGCAATGTGCCCAAAATGCTTAGAGAGTTGCAAAACAGA
TGCCTTGATCAGAACCCAGAGCTGAGGCCAACCGCCGCCGACTGTTACCACCACCTGCTT
CAGTTGCAGTCGTCTCTGTCAGTAGCCGCAGCCTCCTCTAGTACTGCTCCCTATTAG

Peptide Sequence

PEP ID

Cs9g16440.1
PEP Infomation
Sequence

MGDNKGDTTKKQKSQQPQQLQQQQQQPQQQQLSSSPKNPLEESTEKGQHHHQQPPAVVVT
GAPYISAPLYVPIGPTSSSPFEQQFEPVNPKRQRYNSSQWKLLPSPSQQQQQKQQAQMAI
LTTESSPSPTTLPITNPQSQAHTTTASSSDTASSPPHSPIPSLSAASGQETNRPELLGEQ
FHPQFRKGKYVSPVWKPNEMLWLARAWRIQYQGGGGSNGSGSSSRVDHHQPESTGQGEVA
AAAQSTRAKTRADKDREVAEFLQRHGVNRDAKTSGTKWDNMLGEFRKVYEWERGGEREQV
GKSYFRLSPYERKLHRLPASFDEEVFEELSQFMGSRMRSTSQSRAASSVFVSSDHDNRST
RALPPPPPFKEDELSLSARAKQLVMTSGGEAFFHGGRGSLLGFESSLDVGSKELRRIGRI
RMTWEESVSLWAEEGEHQRGRIKLQGSSFLNADELTFFDDAMVACNMEAFEEGTLRGFSV
DRFVPGQQVKVFGRRKSSSGSASASSAGFFERVQFPFTEPSIRFTPWEYQDPSDYYVGCL
RVPPTTLPSLFELSWHLQEPPPEEFRFPIRKDVYRDLPQGKEIFFTTSTELLDCRAITYD
ILSPIVRGNNPSLSFSTAASRDSFIGLWDDCINRVVSKFCSSEMVIVRKPSSSSISSPEP
LQDQWPNVTGFVRNLCLWRGEETDQLKEGQLDPSSSIVEKLLWTYMDLPYLFGYYAVGYI
VTFCALSRSQDRVVRTDLYSLDLSSPVERLKALIPCYRIAGLLPLLADRCFNSSSSIISN
GGGGYKQYPFSDFERIDLGSGNIIEMTPNTVTRFFSSKRKWAAVKQIYDFLDHRIPHAEA
IYESSEKDLALVFKPRGCKLKPTSCEQLVEALKYVTKALVALHDLSFMHKDLSWDKVMRR
SDRENEWFVSGFDEAASAPQIYPQLVAAVAGGVEARGRHAPEMGRPGLHGVKVDVWGVGQ
LVKTCGLSNVPKMLRELQNRCLDQNPELRPTAADCYHHLLQLQSSLSVAAASSSTAPY*

Transcript Sequence

Transcript ID

Cs9g16440.1
Transcript Infomation

gene=Cs9g16440 CDS=1-3057
Sequence

ATGGGTGACAACAAAGGAGATACAACCAAGAAGCAAAAATCACAACAACCTCAACAGCTG
CAGCAGCAGCAACAGCAACCTCAGCAGCAACAACTTTCATCCTCCCCGAAAAATCCACTT
GAGGAGTCAACTGAAAAAGGCCAGCACCATCACCAACAGCCGCCGGCAGTTGTGGTCACC
GGAGCTCCGTACATCTCTGCTCCTTTGTATGTTCCTATTGGTCCAACTTCTTCCTCTCCA
TTTGAGCAACAATTTGAGCCAGTAAATCCCAAAAGGCAACGATATAATAGCAGCCAATGG
AAGCTTTTACCATCACCATCTCAACAGCAACAACAAAAGCAACAAGCCCAAATGGCTATA
CTCACCACAGAATCAAGCCCATCACCAACCACACTCCCAATAACCAACCCACAAAGCCAA
GCTCATACCACCACGGCTTCCTCTTCAGACACAGCATCATCTCCTCCTCACTCACCTATT
CCTTCTCTCTCAGCAGCTTCTGGTCAAGAGACAAACAGGCCAGAATTACTGGGTGAGCAA
TTTCACCCCCAGTTCAGAAAAGGCAAGTATGTAAGCCCAGTTTGGAAACCAAACGAGATG
CTGTGGCTAGCTAGGGCTTGGAGGATTCAGTACCAAGGTGGTGGTGGATCCAACGGCTCT
GGATCTTCCTCAAGAGTTGATCATCATCAGCCAGAGAGTACTGGTCAGGGAGAAGTTGCT
GCTGCTGCCCAATCAACGAGAGCAAAAACTAGGGCTGATAAAGACAGAGAAGTTGCAGAG
TTCTTGCAAAGACATGGAGTGAATAGAGATGCTAAAACATCTGGGACCAAGTGGGATAAC
ATGTTGGGTGAATTTAGAAAGGTTTACGAATGGGAGAGAGGCGGTGAAAGAGAACAAGTT
GGTAAGAGTTACTTCAGACTCTCTCCATATGAGAGGAAATTACACAGGCTGCCAGCTTCA
TTTGATGAAGAAGTATTTGAAGAATTGTCTCAGTTCATGGGGTCTCGCATGAGATCAACA
TCTCAAAGCAGAGCAGCTTCTTCTGTTTTTGTTTCAAGTGATCATGACAATAGATCAACC
AGAGCTCTTCCTCCTCCCCCTCCTTTCAAAGAAGATGAGCTCTCTCTCTCTGCGAGGGCA
AAGCAACTGGTGATGACAAGTGGGGGGGAAGCTTTTTTCCATGGTGGAAGAGGGAGCTTG
TTAGGGTTCGAGTCTTCACTAGATGTGGGTTCCAAGGAACTCAGAAGAATAGGCAGAATA
AGAATGACATGGGAGGAGTCAGTGAGCTTGTGGGCAGAAGAAGGTGAGCATCAAAGAGGA
AGAATAAAGCTTCAAGGGTCAAGCTTTTTGAATGCGGACGAGCTCACTTTCTTTGATGAC
GCTATGGTTGCTTGCAACATGGAAGCTTTCGAAGAAGGAACTCTTAGAGGTTTCTCTGTT
GATAGATTCGTTCCTGGACAGCAAGTCAAAGTCTTTGGCAGAAGAAAGTCTTCCTCAGGC
TCAGCTTCTGCTTCTTCTGCTGGTTTCTTTGAAAGAGTTCAGTTCCCATTCACTGAACCC
TCCATAAGATTTACTCCATGGGAGTATCAGGATCCAAGTGACTACTACGTGGGATGTCTT
CGTGTCCCGCCGACAACACTACCTAGCTTGTTCGAGCTTTCATGGCATTTACAAGAGCCA
CCACCCGAGGAATTTCGTTTCCCAATTAGAAAAGATGTTTATAGAGACTTACCGCAAGGG
AAAGAAATTTTCTTTACTACTTCAACTGAATTGTTAGATTGTAGGGCCATTACATACGAT
ATTTTAAGCCCCATTGTTCGTGGTAATAACCCTAGTCTTAGTTTTTCAACCGCCGCTAGT
AGAGATTCCTTCATTGGCCTTTGGGATGATTGCATCAATAGGGTTGTTTCCAAATTCTGT
TCTTCTGAAATGGTCATTGTACGGAAACCTTCTTCTTCATCAATATCATCACCAGAGCCA
TTGCAGGACCAATGGCCAAACGTGACGGGGTTTGTTAGAAATCTTTGTTTGTGGAGAGGA
GAAGAGACCGATCAATTGAAAGAAGGCCAACTTGATCCTTCATCTTCAATTGTGGAGAAG
CTACTATGGACTTACATGGACCTTCCGTATTTGTTTGGCTACTATGCGGTCGGCTACATA
GTAACATTCTGTGCATTGAGTCGATCACAAGACCGTGTTGTGAGAACAGATTTGTATTCA
CTAGACTTGTCTTCACCAGTTGAGAGGCTCAAAGCCCTAATCCCATGTTACAGAATAGCA
GGCCTGTTGCCTTTGTTAGCCGATCGTTGCTTCAACAGCAGCAGCAGCATTATTAGCAAC
GGCGGCGGTGGTTACAAGCAGTACCCTTTCAGTGATTTCGAAAGAATCGATTTGGGCAGC
GGTAACATCATCGAAATGACACCAAACACAGTCACTAGATTTTTCTCGAGCAAGAGAAAA
TGGGCAGCGGTGAAACAGATATACGATTTCTTAGACCACAGAATCCCGCACGCAGAGGCC
ATATACGAGTCATCAGAGAAAGATTTGGCATTGGTGTTCAAGCCAAGAGGGTGCAAACTG
AAGCCCACGAGTTGTGAGCAACTCGTGGAGGCACTCAAATACGTGACCAAAGCACTAGTA
GCGTTACACGATCTATCTTTCATGCACAAGGACCTGAGTTGGGATAAAGTGATGAGAAGA
AGCGATAGGGAAAACGAGTGGTTCGTAAGTGGGTTCGATGAGGCAGCGAGCGCGCCGCAG
ATATACCCACAGTTGGTGGCGGCGGTGGCGGGAGGAGTGGAGGCGCGTGGGAGGCACGCA
CCGGAGATGGGGAGGCCCGGGTTGCATGGAGTGAAAGTTGACGTATGGGGAGTGGGGCAG
TTGGTGAAAACATGCGGGCTGAGCAATGTGCCCAAAATGCTTAGAGAGTTGCAAAACAGA
TGCCTTGATCAGAACCCAGAGCTGAGGCCAACCGCCGCCGACTGTTACCACCACCTGCTT
CAGTTGCAGTCGTCTCTGTCAGTAGCCGCAGCCTCCTCTAGTACTGCTCCCTATTAG