Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs8g18330.1
CDS Infomation

gene=Cs8g18330
Sequence

ATGGAAGACGAAAAAGGAGTGCTCGTGCAGAGCTTGATCGACACAGTGAACGAGATATCG
ACGATTTCGGATTACAGAGGTACGGTCAAGAAGCAGTACTGCAACTTGGCGAGGAGATTG
AAGCTGTTGACGCCAATGTTTGAGGAAATTAAAGAAAGTAAAGAAGCGATTCCAGAAGAG
ACTTCTAAAGCTTTGGTTTCGTTGAAGGAGGCGTTAGCTTCGGCTAAGGAGTTGCTTAGA
TTTGGCAGCGAAGGCAGCAAGATTTACCTGGTTTTAGAGAGGGGTGAAATTATGACAAAA
TTCTATGAGGTTACAGCGCAGTTGGAACAAGCTTTGAGTGCAATTTCTTATGAAAACCTC
GACATATCAGATGAAGTCAAGGAACAGGTTGAGCTTGTTCTTTCTCAGTTCAGAAGAGCC
AAAGGAAGAGTTGATGCACCTGATGTTGAGCTGTACGAGGAACTTTTGTCCCTCTATAAC
AAGAACAATGATGTAACACCAGATCCAGCTGTCCTAAGGGGATTGGCTGAGAAGTTACAA
CTGATGGGAATAGCTGATCTAACACAAGAGTCACTGGCGTTGCATGAGATGGTTGCTTCC
ACTGGGGGAGATCCTGGGGAGACCATTGAGAAGATGTCAATGTTGTTGAAGAAGATTAAG
GATTTTGTGCAAACAGAGAACCCTAACTTGGATGCTCCTTTGAAAGAAAAGAATCCTGGT
CCAAGTCAGGGTGGTCAAGCTTCCAGCGATAGGAATCACAAGGCTCCAGTTATACCAGAT
GATTTCCGCTGTCCAATATCACTGGAGTTGATGAAGGATCCTGTCATTGTTTCAACAGGA
CAGACCTATGAGCGTTCCTGCATTGAAAAGTGGCTGGAAGCAGGGCATAGGACATGTCCA
AAGACACAACAGACTCTCACTAGTACTGCAGTTACACCCAATTATGTCCTTCGTAGTCTC
ATTGCCCAGTGGTGTGAAGCAAATGGCATTGAACCACCAAAACGACCCAGTAGTTCGCGA
CCCAGTAAAACTTCATCTGCATGCTCACCTGCAGAACGTACCAAAATTGAGATTCTCCTC
TGCAAGCTCACATCTGGAAGTCCTGAGGATCAGCGATCTGCTGCAGGTGAAATCCGCCTT
CTTGCCAAGCGGAATGCAGATAATCGTGTGGCAATTGCTGAAGCTGGTGCAATCCCTCTC
CTTGTAGGCCTTCTCTCAACTCCTGATTCTCGTACCCAAGAACATGCAGTAACAGCTCTA
CTTAACCTTTCCATCTGTGAAGATAACAAAGGAAGCATTGTCTCATCTGGAGCAGTTCCT
AGTATAGTTCATGTGCTCAGGATAGGGAGCATGGAGGCTCGAGAAAATGCGGCAGCTACC
CTCTTTAGCCTTTCAGTTATTGATGAAAATAAGGTTACAATTGGTGCTTCTGGGGCCATC
CCACCACTTGTGACACTGCTGAGCGAAGGTACCCAGAGAGGAAAGAAGGATGCAGCAACT
GCACTCTTCAATTTGTGCATTTACCAAGGGAACAAGGGAAAGGCAGTGAGGGCTGGAGTT
GTGCCTACACTGATGCATTTGCTCACAGAACCTGGAGGTGGAATGGTGGATGAAGCACTG
GCCATCCTGGCCATACTGTCTAGCCACCCTGAAGGGAAGGCGGCCATTGGGGCTGCTGAG
GCAGTGCCAGTTTTGGTGGAGGTTATTGGGAATGGATCTCCCAGGAACAGAGAGAATGCA
GCTGCTGTCTTGGTACATCTCTGTGCCGGAGACCAACAATATCTAGCAGAGGCTAAGGAA
CTTGGGGTGATGGGCCCTCTGGTGGATTTGGCACAAAACGGCACAGACAGGGGTAAGCGA
AAAGCTGCACAGCTGCTTGAACGTATGAGCAGGTTTATTGAGCAGCAAAAGCAAGCTCAG
GTTCAAACTGAGTCTCAGTCTCAGATACAGGAGGCAAGGCTACCATCAAATGCTGCTGAC
AGCTGA

Peptide Sequence

PEP ID

Cs8g18330.1
PEP Infomation
Sequence

MEDEKGVLVQSLIDTVNEISTISDYRGTVKKQYCNLARRLKLLTPMFEEIKESKEAIPEE
TSKALVSLKEALASAKELLRFGSEGSKIYLVLERGEIMTKFYEVTAQLEQALSAISYENL
DISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQ
LMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPG
PSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCP
KTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILL
CKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTAL
LNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEAL
AILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKE
LGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAAD
S*

Transcript Sequence

Transcript ID

Cs8g18330.1
Transcript Infomation

gene=Cs8g18330 CDS=1-1986
Sequence

ATGGAAGACGAAAAAGGAGTGCTCGTGCAGAGCTTGATCGACACAGTGAACGAGATATCG
ACGATTTCGGATTACAGAGGTACGGTCAAGAAGCAGTACTGCAACTTGGCGAGGAGATTG
AAGCTGTTGACGCCAATGTTTGAGGAAATTAAAGAAAGTAAAGAAGCGATTCCAGAAGAG
ACTTCTAAAGCTTTGGTTTCGTTGAAGGAGGCGTTAGCTTCGGCTAAGGAGTTGCTTAGA
TTTGGCAGCGAAGGCAGCAAGATTTACCTGGTTTTAGAGAGGGGTGAAATTATGACAAAA
TTCTATGAGGTTACAGCGCAGTTGGAACAAGCTTTGAGTGCAATTTCTTATGAAAACCTC
GACATATCAGATGAAGTCAAGGAACAGGTTGAGCTTGTTCTTTCTCAGTTCAGAAGAGCC
AAAGGAAGAGTTGATGCACCTGATGTTGAGCTGTACGAGGAACTTTTGTCCCTCTATAAC
AAGAACAATGATGTAACACCAGATCCAGCTGTCCTAAGGGGATTGGCTGAGAAGTTACAA
CTGATGGGAATAGCTGATCTAACACAAGAGTCACTGGCGTTGCATGAGATGGTTGCTTCC
ACTGGGGGAGATCCTGGGGAGACCATTGAGAAGATGTCAATGTTGTTGAAGAAGATTAAG
GATTTTGTGCAAACAGAGAACCCTAACTTGGATGCTCCTTTGAAAGAAAAGAATCCTGGT
CCAAGTCAGGGTGGTCAAGCTTCCAGCGATAGGAATCACAAGGCTCCAGTTATACCAGAT
GATTTCCGCTGTCCAATATCACTGGAGTTGATGAAGGATCCTGTCATTGTTTCAACAGGA
CAGACCTATGAGCGTTCCTGCATTGAAAAGTGGCTGGAAGCAGGGCATAGGACATGTCCA
AAGACACAACAGACTCTCACTAGTACTGCAGTTACACCCAATTATGTCCTTCGTAGTCTC
ATTGCCCAGTGGTGTGAAGCAAATGGCATTGAACCACCAAAACGACCCAGTAGTTCGCGA
CCCAGTAAAACTTCATCTGCATGCTCACCTGCAGAACGTACCAAAATTGAGATTCTCCTC
TGCAAGCTCACATCTGGAAGTCCTGAGGATCAGCGATCTGCTGCAGGTGAAATCCGCCTT
CTTGCCAAGCGGAATGCAGATAATCGTGTGGCAATTGCTGAAGCTGGTGCAATCCCTCTC
CTTGTAGGCCTTCTCTCAACTCCTGATTCTCGTACCCAAGAACATGCAGTAACAGCTCTA
CTTAACCTTTCCATCTGTGAAGATAACAAAGGAAGCATTGTCTCATCTGGAGCAGTTCCT
AGTATAGTTCATGTGCTCAGGATAGGGAGCATGGAGGCTCGAGAAAATGCGGCAGCTACC
CTCTTTAGCCTTTCAGTTATTGATGAAAATAAGGTTACAATTGGTGCTTCTGGGGCCATC
CCACCACTTGTGACACTGCTGAGCGAAGGTACCCAGAGAGGAAAGAAGGATGCAGCAACT
GCACTCTTCAATTTGTGCATTTACCAAGGGAACAAGGGAAAGGCAGTGAGGGCTGGAGTT
GTGCCTACACTGATGCATTTGCTCACAGAACCTGGAGGTGGAATGGTGGATGAAGCACTG
GCCATCCTGGCCATACTGTCTAGCCACCCTGAAGGGAAGGCGGCCATTGGGGCTGCTGAG
GCAGTGCCAGTTTTGGTGGAGGTTATTGGGAATGGATCTCCCAGGAACAGAGAGAATGCA
GCTGCTGTCTTGGTACATCTCTGTGCCGGAGACCAACAATATCTAGCAGAGGCTAAGGAA
CTTGGGGTGATGGGCCCTCTGGTGGATTTGGCACAAAACGGCACAGACAGGGGTAAGCGA
AAAGCTGCACAGCTGCTTGAACGTATGAGCAGGTTTATTGAGCAGCAAAAGCAAGCTCAG
GTTCAAACTGAGTCTCAGTCTCAGATACAGGAGGCAAGGCTACCATCAAATGCTGCTGAC
AGCTGAGGGTTTTTGTTTTTCCCGATTTGTTCATTTGATCATTTTGTTTTCTATTTTGTG
TATTGAAAAAGAGGCAGCGATGCTGCGGGGGAGGGGTGGAAGATCACCCGTCCAATCTGT
AAGTTATTCATTTGTTTGTGTGAAATGGGGACAAACACCCACGAGATAACTCACAAAGTC
ATCAAATCGAAAAATTGGGGGAGGAGGAAAAGACTGAGATGCAGTATTGTGATATGTACC
ATTGTAACATGTACAACTGTGATCATCCTCAAGTTTTAGTGAAGAGATGTTTCCTGTATT
CAAGCCAATTTATATACGATGTCGATACCAAATTTTACGTGCCCAGCTTTAGCTTTCAAT
GGAGAGAGGATTTTT