Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs8g16850.3
CDS Infomation

gene=Cs8g16850
Sequence

ATGGGTTCTGTGTTTCAAGTAGATCCAGATGCAGAAGTGATAGCTTTATCTCCAAAATCT
CTCATGGCCACAAATCGATTCCTATGTGAAATTTGCAACAAGGGTTTCCAAAGAGACCAG
AATTTGCAGCTTCACAGAAGAGGCCACAATCTGCCATGGAAGCTGAAGCAAAGAACAAAC
AAAGAAGTAAGAAAGAAGGTGTATATTTGCCCAGAAAAAAGCTGCGTGCATCATGATCCA
TCAAGAGCCCTAGGTGACCTCACTGGAATAAAGAAGCACTTCAGCAGAAAACATGGGGAA
AAGAAATGGAAGTGTGAGAAATGTTCAAAGAAATATGCAGTTCAATCAGATTGGAAAGCT
CATAGTAAGATTTGCGGCACTCGAGAGTATAGATGCGACTGTGGCACTCTCTTTTCCAGG
AAGGACAGTTTTATCACACACAGGGCCTTTTGTGACGCTTTAGCTGAAGAAAGTGCAAGG
TTCACTACAATTTCATCCACAAACCCTCAAGCTGCCGCTGCAATCCCCCAATTTTCCTCA
GTCTTTAGGCAGCAACAACAATCGGCTCCTGGATCCGAGCTTGCAGGTAATAATGTTATT
GCAGATGGGCAGAAGCCGAGACTACCGCTGTGGCTAGACCAAGCCAATAATTCAAATGCC
ATGTTAACACCAATTGGCTCATCGTCAACAGGCTTGCCTGAATTGTCACAAATGGTGTCA
CCAATGAATATGTTTGGATCTTTGTCACAAATGCAATGGTTTTCAGGTGGTGCCAATCTT
TCAATGTCGTCGTCATCATCATTGCCACGGGGAATACCAAAAGAGGAAGAAGAAAACAAA
GCTTATAATTTGTCCGAGTCCATGACTTCTTTGTATCCGAGTAACCAGAGCGGCCAGCAG
CAGCAGCAACAACAACAACAACAACAACAAGGACTAGCTCACATGTCAGCTACTGCCCTC
TTGCAAAAAGCAGCACAAATGGGTTCTACAAGAAGCAATGCGAACAACAGTACTGGGTTT
GGGCTAATGAGCACTTCATTCAACTCGTTCAACCAAACCGACAAGAACGAATTGCACAAG
TTTTTCAAGCAACCAAATCAGCAAGTTGCTGATAATGATCAGAACTTGAATGAATTAATT
ATGAATTCATTTTCTTGTCCAACCAATATGGGAGCCGTAGCCGGGTCATCAAACGCAAGT
TTGTTAATGGCCAACGCAAAGAATGCAAGCAATGAAGCTGAGAGAAGGCTCACAAGAGAT
TTTCTTGGCGTTGGAGTGGAATCGAGCAGGCCACTTTCTCAACAAGAGCTAGCAAAGTTC
ATGAATTTGAGCAGCCAGTACGGTGGAAACCCACATCATCGAAGCTAG

Peptide Sequence

PEP ID

Cs8g16850.3
PEP Infomation
Sequence

MGSVFQVDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTN
KEVRKKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKA
HSKICGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARFTTISSTNPQAAAAIPQFSS
VFRQQQQSAPGSELAGNNVIADGQKPRLPLWLDQANNSNAMLTPIGSSSTGLPELSQMVS
PMNMFGSLSQMQWFSGGANLSMSSSSSLPRGIPKEEEENKAYNLSESMTSLYPSNQSGQQ
QQQQQQQQQQGLAHMSATALLQKAAQMGSTRSNANNSTGFGLMSTSFNSFNQTDKNELHK
FFKQPNQQVADNDQNLNELIMNSFSCPTNMGAVAGSSNASLLMANAKNASNEAERRLTRD
FLGVGVESSRPLSQQELAKFMNLSSQYGGNPHHRS*

Transcript Sequence

Transcript ID

Cs8g16850.3
Transcript Infomation

gene=Cs8g16850 CDS=681-2048
Sequence

TTCCTCTACCACACACACACACACACACACATATATATTATATTTATATAATAATATAGA
CGGTGGTCCAGGTGAGTCTATGGCTGACTGACTTCGAGAGAAGCCGTGTAAGATAAGGAG
AGAGTGAGAGAAGAGAGAGAAAGATAGAGAGGGAGAATATTCTCTCAAGGTTGCTTTCTT
TTTGGTGTTTTCTTCTGAGTTTCAAAGCAAACTGATGAAGAATTTTTTTTTTTGGTTGGG
CAACAAGAGTCTAATTTCTTGAACTAGAACAAAGTTTTGATTTAGATTCGTTTGTTCTAG
GGAGCAAGAGCAACAAAATTTGAGAGAATTATTTCTTTTGGACTGTTTTTCTTTATAAGC
TCTCTCTGTGTTGTTTTTTCTTTGTTTTGGTAGCTACTGCTGCTACTACTGCTTTCAGTT
TATTGTTTAGCTCTTCTTGTTTTAGATATATAGCCTGGGACAAAACCATCCATTACTTTT
GAGTTCCACTTACGAAATGATGTCTCAAGATCATGGACTCTCAGTTCCCTCCACTCTTAA
AGGGTTTGTTCAGGAACCAAATTCAAACCCTAACCCTAACCCTAGTTCAAATCAACTGAA
GAGGAAGAGAAATTTACCAGGAACACCAGGTAACAATTACTATCTTGATATCTCATCTTC
TGATCCTTATACTTTGGTTGATGGGTTCTGTGTTTCAAGTAGATCCAGATGCAGAAGTGA
TAGCTTTATCTCCAAAATCTCTCATGGCCACAAATCGATTCCTATGTGAAATTTGCAACA
AGGGTTTCCAAAGAGACCAGAATTTGCAGCTTCACAGAAGAGGCCACAATCTGCCATGGA
AGCTGAAGCAAAGAACAAACAAAGAAGTAAGAAAGAAGGTGTATATTTGCCCAGAAAAAA
GCTGCGTGCATCATGATCCATCAAGAGCCCTAGGTGACCTCACTGGAATAAAGAAGCACT
TCAGCAGAAAACATGGGGAAAAGAAATGGAAGTGTGAGAAATGTTCAAAGAAATATGCAG
TTCAATCAGATTGGAAAGCTCATAGTAAGATTTGCGGCACTCGAGAGTATAGATGCGACT
GTGGCACTCTCTTTTCCAGGAAGGACAGTTTTATCACACACAGGGCCTTTTGTGACGCTT
TAGCTGAAGAAAGTGCAAGGTTCACTACAATTTCATCCACAAACCCTCAAGCTGCCGCTG
CAATCCCCCAATTTTCCTCAGTCTTTAGGCAGCAACAACAATCGGCTCCTGGATCCGAGC
TTGCAGGTAATAATGTTATTGCAGATGGGCAGAAGCCGAGACTACCGCTGTGGCTAGACC
AAGCCAATAATTCAAATGCCATGTTAACACCAATTGGCTCATCGTCAACAGGCTTGCCTG
AATTGTCACAAATGGTGTCACCAATGAATATGTTTGGATCTTTGTCACAAATGCAATGGT
TTTCAGGTGGTGCCAATCTTTCAATGTCGTCGTCATCATCATTGCCACGGGGAATACCAA
AAGAGGAAGAAGAAAACAAAGCTTATAATTTGTCCGAGTCCATGACTTCTTTGTATCCGA
GTAACCAGAGCGGCCAGCAGCAGCAGCAACAACAACAACAACAACAACAAGGACTAGCTC
ACATGTCAGCTACTGCCCTCTTGCAAAAAGCAGCACAAATGGGTTCTACAAGAAGCAATG
CGAACAACAGTACTGGGTTTGGGCTAATGAGCACTTCATTCAACTCGTTCAACCAAACCG
ACAAGAACGAATTGCACAAGTTTTTCAAGCAACCAAATCAGCAAGTTGCTGATAATGATC
AGAACTTGAATGAATTAATTATGAATTCATTTTCTTGTCCAACCAATATGGGAGCCGTAG
CCGGGTCATCAAACGCAAGTTTGTTAATGGCCAACGCAAAGAATGCAAGCAATGAAGCTG
AGAGAAGGCTCACAAGAGATTTTCTTGGCGTTGGAGTGGAATCGAGCAGGCCACTTTCTC
AACAAGAGCTAGCAAAGTTCATGAATTTGAGCAGCCAGTACGGTGGAAACCCACATCATC
GAAGCTAGGTATTTTAAAAGGTATAGCATATTTAGGACAATGATGAAGGCTTTTTAGAGC
CGAGTTGCACTCAAGAGGAAGCGAAAGCAGCAAAGCGAGTCAACTCAGCAAAGAGAGGAG
AGTGAGTGAGTGAGTAGGGGCAAGTCAAGTGGGCCCCTATTATGCATGTAGTTGTAATAT
TTTTACCTTTTTTTTCTTTCTTTATTATTATAACGTCGTTGATCGAACCAAGATCGATCG
TGTTGAAACACATGGTCGTGACCACTTGTTGTCTTGTTCTTTTCTCTAATTCTTAGTCCT
TAAATTTGCCTTTTCAAATTTTCTCACTGATTGTACTGTCGCAGCTGTGACCAATTTTGG
TTGTGGGATTTGAAGATTCAAATC