Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs8g05300.1
CDS Infomation

gene=Cs8g05300
Sequence

ATGGTCATCGAAACACAAAAAAATAACAAAGTTGCATTCACTAATAATTCTAGTCTATCA
TCGTATTTGATTCGGAAGTTGAATATGGGCAGTGAAATCCCTCAGCTTCACGTTTTTTTC
TTTCCATTCATGGCTCACGGCCACATGATTCCAATTGTGGACATGGCGAAGTTGTTTGCA
ACTCGTGGGGTGAAAGCAAGTGTCATCACAACTCCAGCCAATGCTCCTTACGTCTCCAAA
TCAGTAGAAAGAGCCAATGAATTGGGCATCGAAATGGATGTGAAGACCATCAAGTTCCCT
TCTGTGGAGGCCGGTTTGCCAGAGGGATGTGAAAATCTTGACGCAATCACTAATGAAGTG
AACAAGGGATTGATTGTCAAGTTTTTCGGGGCCACAATGAAGCTCCAAGAACCTCTTGAG
CAGCTCTTGCAAGAACATAAACCAGATTGTTTGGTGGCTGATACGTTCTTTCCTTGGGCT
ACTGATGCTGCTGCCAAGTTTGGGATTCCCAGGTTGGTGTTTCATGGTACTAGTTTCTTT
TCTTTGTGTGCATCAAATTGCCTGGCGCTATATGAGCCACACAAGAAAGTTTCATCGGAT
TCAGAGCCATTTGTGATGCCTCATTTTCCTGGTGAGATCAAGCTGACGAGAAACCAATTG
CCAGATTTTGTAAAACAGGATATGGGAGATAATGACTTCAGCAGGTTGTTGAAAGCAATC
GATGACTCAGACTTAAGGAGCTATGGTGTTGCCGTGAACAGCTTTTATGAGCTGGAGCCT
GCTTATGCTGATCATTACAGGAAGGCTTTGGGAAGGAGGGCATGGCATATTGGCCCTGTT
TCGTTATGCAATAGGAATTTTGAAGATAAAGCTTTGAGGGGAAAGCAAGCCTCTATTGAT
GAACTGGAGTGCTTGAAGTGGTTGAATTCAAAGCAACCCTATTCTGTTGTTTACGTTTGC
TTTGGAAGCCTGGCCAACTTTACTTCTGCTCAGCTAATGGAGATTGCAACGGGCCTGGAA
GCTTCAGGGAGAAATTTCATTTGGGTTGTGAGCAAAAACAAGAATGATGGCGGTGAAGGA
GGAAATGAAGATTGGTTGCCTGAAGGATTTGAGAAGAGAATGGAGGGAAAAGGGCTAATC
ATTAGAGGATGGGCGCCACAGGTTTTGATACTTGATCACGAAGCTGTTGGAGGATTTGTG
ACCCATTGCGGATGGAATTCAACTCTTGAAGCGGTGGCTGCTGGGGTACCTCTGGTGACA
TGGCCCGTCGCCGCGGAGCAATTTTACAATGAAAAGATGGTGAATGAAATTCTCAAGATT
GGCGTTGGTGTTGGAATCCAGAAATGGTGCAGAATTGTGGGGGATTTTGTGAAGAGAGAG
ACAATAGAAAAGGCCGTGAATGAGATAATGGTGGGCGATAGGGCAGAAGAAATGAGAAGC
AGAGCCAAGGCTTTGGGGAAGATGGCAAAAAGAGCTGTTGAAAATGGCGGTTCATCGTAC
TCTGATTTGAGTGCTCTTATTGAGGAGTTGCGTTTAAGTCGCCATCAAAGCAGCTAA

Peptide Sequence

PEP ID

Cs8g05300.1
PEP Infomation
Sequence

MVIETQKNNKVAFTNNSSLSSYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFA
TRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLDAITNEV
NKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFF
SLCASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAI
DDSDLRSYGVAVNSFYELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASID
ELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEG
GNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVT
WPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRS
RAKALGKMAKRAVENGGSSYSDLSALIEELRLSRHQSS*

Transcript Sequence

Transcript ID

Cs8g05300.1
Transcript Infomation

gene=Cs8g05300 CDS=93-1649
Sequence

TCTTAGAATATTCCCAAGTCTTCGTCAGTTCTTGGTCTTCAATTATTGTGGTTTATATAT
TTTACGGCTTTCGTGAGTCCACACATACATAGATGGTCATCGAAACACAAAAAAATAACA
AAGTTGCATTCACTAATAATTCTAGTCTATCATCGTATTTGATTCGGAAGTTGAATATGG
GCAGTGAAATCCCTCAGCTTCACGTTTTTTTCTTTCCATTCATGGCTCACGGCCACATGA
TTCCAATTGTGGACATGGCGAAGTTGTTTGCAACTCGTGGGGTGAAAGCAAGTGTCATCA
CAACTCCAGCCAATGCTCCTTACGTCTCCAAATCAGTAGAAAGAGCCAATGAATTGGGCA
TCGAAATGGATGTGAAGACCATCAAGTTCCCTTCTGTGGAGGCCGGTTTGCCAGAGGGAT
GTGAAAATCTTGACGCAATCACTAATGAAGTGAACAAGGGATTGATTGTCAAGTTTTTCG
GGGCCACAATGAAGCTCCAAGAACCTCTTGAGCAGCTCTTGCAAGAACATAAACCAGATT
GTTTGGTGGCTGATACGTTCTTTCCTTGGGCTACTGATGCTGCTGCCAAGTTTGGGATTC
CCAGGTTGGTGTTTCATGGTACTAGTTTCTTTTCTTTGTGTGCATCAAATTGCCTGGCGC
TATATGAGCCACACAAGAAAGTTTCATCGGATTCAGAGCCATTTGTGATGCCTCATTTTC
CTGGTGAGATCAAGCTGACGAGAAACCAATTGCCAGATTTTGTAAAACAGGATATGGGAG
ATAATGACTTCAGCAGGTTGTTGAAAGCAATCGATGACTCAGACTTAAGGAGCTATGGTG
TTGCCGTGAACAGCTTTTATGAGCTGGAGCCTGCTTATGCTGATCATTACAGGAAGGCTT
TGGGAAGGAGGGCATGGCATATTGGCCCTGTTTCGTTATGCAATAGGAATTTTGAAGATA
AAGCTTTGAGGGGAAAGCAAGCCTCTATTGATGAACTGGAGTGCTTGAAGTGGTTGAATT
CAAAGCAACCCTATTCTGTTGTTTACGTTTGCTTTGGAAGCCTGGCCAACTTTACTTCTG
CTCAGCTAATGGAGATTGCAACGGGCCTGGAAGCTTCAGGGAGAAATTTCATTTGGGTTG
TGAGCAAAAACAAGAATGATGGCGGTGAAGGAGGAAATGAAGATTGGTTGCCTGAAGGAT
TTGAGAAGAGAATGGAGGGAAAAGGGCTAATCATTAGAGGATGGGCGCCACAGGTTTTGA
TACTTGATCACGAAGCTGTTGGAGGATTTGTGACCCATTGCGGATGGAATTCAACTCTTG
AAGCGGTGGCTGCTGGGGTACCTCTGGTGACATGGCCCGTCGCCGCGGAGCAATTTTACA
ATGAAAAGATGGTGAATGAAATTCTCAAGATTGGCGTTGGTGTTGGAATCCAGAAATGGT
GCAGAATTGTGGGGGATTTTGTGAAGAGAGAGACAATAGAAAAGGCCGTGAATGAGATAA
TGGTGGGCGATAGGGCAGAAGAAATGAGAAGCAGAGCCAAGGCTTTGGGGAAGATGGCAA
AAAGAGCTGTTGAAAATGGCGGTTCATCGTACTCTGATTTGAGTGCTCTTATTGAGGAGT
TGCGTTTAAGTCGCCATCAAAGCAGCTAAACTTACACAAAGCTAGATATATCATAATAGC
ATGTTTGATTGTCTTTGTTCTTGATCCTGTCGTATTGGGGTGATTCCCAATTGGTTGGTT
GGATTGAGCCTTGAACAGCTTGTTAGCATTTGATTTGTTGGCGACTTTTGCAACAGAAGG
AGAAAATCACGACTTGGCGAAGTCATCTGGTTGGTGACTACAAAGTATGAATCTTTCGAC
TGGATATATGTATGTATATGAATATATTTTCATACGTCCAGTTATGGATGAATTTTGATG
TCAAATACTCTTCCCGCAAGTTTGGTGAAATAATTTTCAACCATTTTTATTTAGTTTCAA
GTAAATTTATTTGGCTTCCTGCTTAAAATTTTGAGAGTGGTGGAAAAATCAGTTTGGTTT
TTCCCTACCTCTTTAACTTTTTTCAACAATAGGCGATTGATGGCCAACCGATCCAATTAC
AGGTTTTTTGAAAAAAAAAAAATCAACATATGAAATAATATTTAACTTATTTGCTCATGA
TAAATCTTTCTGTCAATTAACAG