Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs8g01600.1
CDS Infomation

gene=Cs8g01600
Sequence

ATGGCTCTCAATCTTCGCCAAAAACAAACTGAATGCATAACTCGAATGCTGAATCTAAAC
CAGCCTGTGAATGCCACGGGGACAGCAAATGAAGAGGTTTATAAAATCTTGATCTATGAT
AGGTTTTGTCAGAATATTTTGTCACCCTTGATCCATGTTAAGGATCTTCGAAAACATGGG
GTGACCCTTTATTTCCTCATTGATAAAGATCGTAAACCTGTTCACGACGTGCCTGCTGTG
TACTTTGTTCAAGCAAGCCAGCAGAATATACAGAGAATTATAGCCGATGCTTCTGCTTCG
CTTTATGATAGTTTTCACTTGAACTTTTCATCCTCAATACCTCGTGCACTTCTTGAGGAT
TTGGCATCAGGGATGTTGAATTCGGATTCGATTCAGAGGATCTCAAAGGTCCATGATCAG
TATTTGGATTTTGTGACTTTAGAGGATAATTTGTTTTCGTTGGCACAGAAGAGTAGTTAT
GTTCAATTGAATGATCCAAAGGCAGGGGATAGAGAGATTGAGGAGATTATCGAGAGGATT
GTCAATGGGTTGTTTTGTGTATTGGCTACTCTTGGGGTGGTGCCAATTATAAGGTGTCCG
CGCAGTGGTCCTGCAGAGATGGTTGCTTCGGCGTTGGATCAGAAGTTGAGGGATCATTTG
TTGTCTAAGAACAACTTGTTTTCAGAAGGTGGGAATTTTGCGAGCTCATTTCAGCGTCCA
ATTCTTTGTATTTTCGATAGGAATTTTGAGCTTTCTGTTGGGATACAGCATGACTTTAGG
TATCGACCACTTGTGCATGACGTGCTTGGATTGAAGCTTAATAGGTTGAGTGTGCAGGGA
GAAAAGGGTGGTATGAAGTCATTTGAGTTAGATAGTGCAGACCCATTTTGGGTGGCAAAT
GGGTGGTTGGAATTTCCTGAAGTTGCAGTGGAGATTGAGACCCAACTGAACAAGTATAAA
AAGGATGTTGAGGAGGTGAATAAAAGAACAGGAGGAAACGATGGGGCTGAGTTTGATGGG
ACTGACTTAATTGGAAACACAAAGCATTTGATGAATGCTGTGAACTCGCTACCTGAATTG
ACTGAGAGGAAGCAGGTGATTGATAAGCACACAAACATTGCAACTGTGCTGTTGGGTGAG
ATAAAGGAAAGATCTCTTGATTCCTATGCTAAAAAGGAAAATGACATGATGATCAGAGGA
GGCATTGATCGAAGTGAACTAATGGGTGTGCTTAAAGGGAAAGGCAGTAAGATGGACAAA
TTGCGGTTTGCAATTATCTATCTGATTTCTTCGGAAACCATCAATCAATCAGAAGTGGAA
GCAGTGGAAGCAGCTCTGAGGGAGTCTGAGGTTGATATTAGTGCATTTCAGTATGTGAAG
AAGATCAAGTCATTGAATGTCTCATTGGCATCAGCAAATTCTGCAAGTAGAAATAACATA
GTTGATTGGGCCGAGAAACTATATGGGCAGTCAATCAGTGCTGTGACAGCTGGTGTGAAG
AATTTATTATCTAATGACAGGCAATTGGCACTGACAAGGACAGTGGAAGCTTTGGTGGAG
GGGAGGCCAAATCCTGAAATTGACTCGTACCTCATGTTTGATCCTCGTGCTCCCAAGTCA
AGCTCCGGTAGCAACCATCTGAAGGGACCATTTAAAGAAGCTATTGTGTTCATGATTGGT
GGTGGCAACTACATGGAATATGGCAGCTTGCAAGAGCTTGCGAAGCGTCAGCAGCCTGTG
AAGCATGTTATATACGGAACAACAGAAATTCTCACAGGAGATGAGTTTGTTGAGCAGCTT
GCACTGTTGGGCCAGAAGATGGGATTGGGAAACACTGTTGCCCCATCAACCCATTAA

Peptide Sequence

PEP ID

Cs8g01600.1
PEP Infomation
Sequence

MALNLRQKQTECITRMLNLNQPVNATGTANEEVYKILIYDRFCQNILSPLIHVKDLRKHG
VTLYFLIDKDRKPVHDVPAVYFVQASQQNIQRIIADASASLYDSFHLNFSSSIPRALLED
LASGMLNSDSIQRISKVHDQYLDFVTLEDNLFSLAQKSSYVQLNDPKAGDREIEEIIERI
VNGLFCVLATLGVVPIIRCPRSGPAEMVASALDQKLRDHLLSKNNLFSEGGNFASSFQRP
ILCIFDRNFELSVGIQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMKSFELDSADPFWVAN
GWLEFPEVAVEIETQLNKYKKDVEEVNKRTGGNDGAEFDGTDLIGNTKHLMNAVNSLPEL
TERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDK
LRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKSLNVSLASANSASRNNI
VDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKS
SSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQL
ALLGQKMGLGNTVAPSTH*

Transcript Sequence

Transcript ID

Cs8g01600.1
Transcript Infomation

gene=Cs8g01600 CDS=176-2032
Sequence

CTCCACCATTTTCAACCTTTGCTTTTCCCATTTTGCCCATCTGCATCTACTCGAGTACTC
GACCGCTTCTTCAATTCCATTTCACCATCCTAAAGCCTTCAATTTTACAAAAGCTTCAAA
CGCTTGGAGAATAAAAAGCAACTGAACAAAAATTTAGCAAAGTGTTTACATCACCATGGC
TCTCAATCTTCGCCAAAAACAAACTGAATGCATAACTCGAATGCTGAATCTAAACCAGCC
TGTGAATGCCACGGGGACAGCAAATGAAGAGGTTTATAAAATCTTGATCTATGATAGGTT
TTGTCAGAATATTTTGTCACCCTTGATCCATGTTAAGGATCTTCGAAAACATGGGGTGAC
CCTTTATTTCCTCATTGATAAAGATCGTAAACCTGTTCACGACGTGCCTGCTGTGTACTT
TGTTCAAGCAAGCCAGCAGAATATACAGAGAATTATAGCCGATGCTTCTGCTTCGCTTTA
TGATAGTTTTCACTTGAACTTTTCATCCTCAATACCTCGTGCACTTCTTGAGGATTTGGC
ATCAGGGATGTTGAATTCGGATTCGATTCAGAGGATCTCAAAGGTCCATGATCAGTATTT
GGATTTTGTGACTTTAGAGGATAATTTGTTTTCGTTGGCACAGAAGAGTAGTTATGTTCA
ATTGAATGATCCAAAGGCAGGGGATAGAGAGATTGAGGAGATTATCGAGAGGATTGTCAA
TGGGTTGTTTTGTGTATTGGCTACTCTTGGGGTGGTGCCAATTATAAGGTGTCCGCGCAG
TGGTCCTGCAGAGATGGTTGCTTCGGCGTTGGATCAGAAGTTGAGGGATCATTTGTTGTC
TAAGAACAACTTGTTTTCAGAAGGTGGGAATTTTGCGAGCTCATTTCAGCGTCCAATTCT
TTGTATTTTCGATAGGAATTTTGAGCTTTCTGTTGGGATACAGCATGACTTTAGGTATCG
ACCACTTGTGCATGACGTGCTTGGATTGAAGCTTAATAGGTTGAGTGTGCAGGGAGAAAA
GGGTGGTATGAAGTCATTTGAGTTAGATAGTGCAGACCCATTTTGGGTGGCAAATGGGTG
GTTGGAATTTCCTGAAGTTGCAGTGGAGATTGAGACCCAACTGAACAAGTATAAAAAGGA
TGTTGAGGAGGTGAATAAAAGAACAGGAGGAAACGATGGGGCTGAGTTTGATGGGACTGA
CTTAATTGGAAACACAAAGCATTTGATGAATGCTGTGAACTCGCTACCTGAATTGACTGA
GAGGAAGCAGGTGATTGATAAGCACACAAACATTGCAACTGTGCTGTTGGGTGAGATAAA
GGAAAGATCTCTTGATTCCTATGCTAAAAAGGAAAATGACATGATGATCAGAGGAGGCAT
TGATCGAAGTGAACTAATGGGTGTGCTTAAAGGGAAAGGCAGTAAGATGGACAAATTGCG
GTTTGCAATTATCTATCTGATTTCTTCGGAAACCATCAATCAATCAGAAGTGGAAGCAGT
GGAAGCAGCTCTGAGGGAGTCTGAGGTTGATATTAGTGCATTTCAGTATGTGAAGAAGAT
CAAGTCATTGAATGTCTCATTGGCATCAGCAAATTCTGCAAGTAGAAATAACATAGTTGA
TTGGGCCGAGAAACTATATGGGCAGTCAATCAGTGCTGTGACAGCTGGTGTGAAGAATTT
ATTATCTAATGACAGGCAATTGGCACTGACAAGGACAGTGGAAGCTTTGGTGGAGGGGAG
GCCAAATCCTGAAATTGACTCGTACCTCATGTTTGATCCTCGTGCTCCCAAGTCAAGCTC
CGGTAGCAACCATCTGAAGGGACCATTTAAAGAAGCTATTGTGTTCATGATTGGTGGTGG
CAACTACATGGAATATGGCAGCTTGCAAGAGCTTGCGAAGCGTCAGCAGCCTGTGAAGCA
TGTTATATACGGAACAACAGAAATTCTCACAGGAGATGAGTTTGTTGAGCAGCTTGCACT
GTTGGGCCAGAAGATGGGATTGGGAAACACTGTTGCCCCATCAACCCATTAAATACAGAT
ATATCATAGATGTTCTTTCTTGTAAGACTTTCATTTGGTGATTTTATGCTTATAAGGAGG
CACACTGGGAATTGATGCCGAGGCAGGTTTTGGAGCTGAATATTTGTGAAGGAACGCGAT
GGGGTTGGTGTGTGTGCTTGTTTATTGGTTATATTGGCCCCTGAGTGTTTTAAGTGAGAC
TCAAAACATACCGTTCTTTTGACAATGTAGAAGAATGTTTTTAGCTTAATAGCAATTAGG
CATCTTCTTTGAAGTAAGCTTCTGTTGTTGGAATGTACCTGTTTCATTTTGCACTGTAAT
TGAAACCTTAACCTCAGAGAATTATTTTGTTAATGCTATCCACATCAATATATGAGTGTT
GTTCAGTTTCAC