Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs6g17530.1
CDS Infomation

gene=Cs6g17530
Sequence

ATGAAGAGAGATCACCAACACAGTTACGGTGGCGGTAGTGGAAGTGGAAAAGGCGATTAT
TCTTCGTCAACGGGAAATGCAAATAAGGCAAAGATGTGGGAGGAAGAGCAAGACACTGGC
GGCATGGACGAGTTATTGGAAGTTTTGGGTTACAAAGTACGATCTTCAGAGATGGCTGAT
GTTGCTCAGAAGCTTGAACAGCTGGAGATGGTGATGGGCACTGCTCAAGAAGACGGAATT
TCTCATCTTGCCACTGACACTGTTCACTACAACCCATCTGATGTTTCGGGCTGGGTTCAG
AGCATGCTCGAGGGGCTCAACAACACCGGATTCGATTCACAAGCTCGCCCAATTCAAGAT
CCTGCTGAATCATCCACCGTCAATTCGATCCTGGGGCAACAGACTAGTAATCAGTCGAGA
ATTTTCAACGATGACTCAGAATACGATCTCAGAGCAATTCCAGGCTCTGCTGCGTACCCA
CAACCTGATTCGGAAACCGAAAATAATAGGAACAAGAGAATGAGAGTTGAGATTAATACT
GCAAATACAAATACAATAATCCCTACAGAGTTAGCTCGTCCCGTGGTGGTCGACTCTCAA
GAAACCGGAGTCCAACTCGTCCACACACTCATGGCATGTGCGGAAGCAATCCAGCAAGAA
AACTTAAAAGTCGCGGATGCGCTTGTGAAGCACATAGGCTTACTGGCAGCAGCGCAAGCC
GGCGCCATGAGAAAGGTGGCTACTTATTTCGCGGAAGCATTGGCTCGAAGGATTTACAGA
ATTTACCCACAAGATTGCCTTGATTCATCTTACAACGACATCCTTCAGATGCACTTCTAC
GAGACCTGCCCGTATCTCAAATTCGCTCACTTCACAGCTAATCAGGCCATTCTCGAAGCT
TTTAACAACGCCAATAGAGTCCACGTTATTGATTTTAGTCTTAAACAAGGCATGCAATGG
CCGGCTTTGATGCAAGCTCTGGCTTTAAGACCTGGCGGCCCGCCGGCTTTTCGTCTCACT
GGCATCGGCCCGCCGCAGCCGGACAACACCGACGCGTTGCAACAAGTGGGTTGGAAACTG
GCTCAGTTGGCTGACACTATTGGGGTTGAGTTCGAGTTCCGTGGGTTTGTCTGTAACAGT
TTAGCCGATCTTGAACCGGATATGCTTGATATCCGGCCGCCGGAAGTCGAAACCGTGGCT
GTGAATTCGGTCTTTGAGCTTCATCGCCTCTTGGCTCGCCCCGGTGGAATTGAAAAAGTT
GTTTCTTCCATTAAAGCAATGAGGCCCAAGATTATTACAATAGTCGAACAAGAGGCGAAC
CACAACAGCCCGGTTTTTCTAGACCGGTTCACCGAAGCCTTGCATTATTACTCGAGTTTG
TTCGACTCGTTGGAGGGGTCTGGGTTGACTCCACCGAGTCAAGACCAAGTGATGTCCGAG
GTGTACTTAGGGAGACAGATATGTAACATCGTTGCTTGTGATGGAACCGATAGGAACGAG
CGACACGAGACGTTGACTCAGTGGCGAACTCGGCTGGGTTCGGCCGGGTTCGAGCCGGTT
CACCTGGGTTCAAATGCGTATAAACAAGCCAGTATGTTGCTGGCTTTGTTTGCTGGTGGC
GACGGGTATAGAGTTGAGGAGAATAATGGTTGTCTGATGCTTGGGTGGCACACACGGCCG
CTCATTGCCACCTCGGCCTGGCAACTCGCCAAGTCCACTCTCGTGAGTTGA

Peptide Sequence

PEP ID

Cs6g17530.1
PEP Infomation
Sequence

MKRDHQHSYGGGSGSGKGDYSSSTGNANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMAD
VAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLEGLNNTGFDSQARPIQD
PAESSTVNSILGQQTSNQSRIFNDDSEYDLRAIPGSAAYPQPDSETENNRNKRMRVEINT
ANTNTIIPTELARPVVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQA
GAMRKVATYFAEALARRIYRIYPQDCLDSSYNDILQMHFYETCPYLKFAHFTANQAILEA
FNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKL
AQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKV
VSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSE
VYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGG
DGYRVEENNGCLMLGWHTRPLIATSAWQLAKSTLVS*

Transcript Sequence

Transcript ID

Cs6g17530.1
Transcript Infomation

gene=Cs6g17530 CDS=715-2445
Sequence

ATATGCCTAAATAGTAAATACATAAATAGAGAGCGTGTAGACGCGCCCAGTTAAGGGGAG
TTGAATTAGCACAAAACACTCCTGTAACTCAAAATTGGCAGCTGGACCCCACGTCTCATT
CTCATTTCCCAAAAACCCTTAATCGATCAACGTGAGGCCACCAGATTTTCTAATTTGTGG
GTCTTTGGTATACACGAGCAGTAGTACATTATCATCAACAACAGCATCAGCAGCAGCATC
TTTTTTAGCATTGCGGTGCTGCTACGGCTCTTTTGATGATGCTTTTAAATGCTTGCCGGA
GCTAATTTTCACAAACCACCTTTTCTTTATTTATTTACAAAAAAAAAAATTTAAAATATA
TTAACGTAACTTCATAACCCAAAAACAAATTTTTAAAAATAATAATAATACAAATAAAAT
AAAGTCCCATTATTATGGCCTTCGTTGTTCCTTATCTCTTCCACTCGCAACCCTCCCTGT
TGCTTCATTGGACCTCCCACCCATAACATTCCTTTTCTTTCATCATTTCCTCCTAAAACC
CTTTTCAAAAAATGCAAAAATTTTCTCCAATATAAGCCCCCACTTCCCTCTCGTGGCCAA
ATTCTAGTATCTTTCCTCTACTCCTCTTCTTTTTCTTTCAGAATCAAAGAACCCAACAAA
AGAGAACCCTCAACAAAAAGAAGAGAAGAAAAAAAAAGGAAAAATCTCATCATCATGAAG
AGAGATCACCAACACAGTTACGGTGGCGGTAGTGGAAGTGGAAAAGGCGATTATTCTTCG
TCAACGGGAAATGCAAATAAGGCAAAGATGTGGGAGGAAGAGCAAGACACTGGCGGCATG
GACGAGTTATTGGAAGTTTTGGGTTACAAAGTACGATCTTCAGAGATGGCTGATGTTGCT
CAGAAGCTTGAACAGCTGGAGATGGTGATGGGCACTGCTCAAGAAGACGGAATTTCTCAT
CTTGCCACTGACACTGTTCACTACAACCCATCTGATGTTTCGGGCTGGGTTCAGAGCATG
CTCGAGGGGCTCAACAACACCGGATTCGATTCACAAGCTCGCCCAATTCAAGATCCTGCT
GAATCATCCACCGTCAATTCGATCCTGGGGCAACAGACTAGTAATCAGTCGAGAATTTTC
AACGATGACTCAGAATACGATCTCAGAGCAATTCCAGGCTCTGCTGCGTACCCACAACCT
GATTCGGAAACCGAAAATAATAGGAACAAGAGAATGAGAGTTGAGATTAATACTGCAAAT
ACAAATACAATAATCCCTACAGAGTTAGCTCGTCCCGTGGTGGTCGACTCTCAAGAAACC
GGAGTCCAACTCGTCCACACACTCATGGCATGTGCGGAAGCAATCCAGCAAGAAAACTTA
AAAGTCGCGGATGCGCTTGTGAAGCACATAGGCTTACTGGCAGCAGCGCAAGCCGGCGCC
ATGAGAAAGGTGGCTACTTATTTCGCGGAAGCATTGGCTCGAAGGATTTACAGAATTTAC
CCACAAGATTGCCTTGATTCATCTTACAACGACATCCTTCAGATGCACTTCTACGAGACC
TGCCCGTATCTCAAATTCGCTCACTTCACAGCTAATCAGGCCATTCTCGAAGCTTTTAAC
AACGCCAATAGAGTCCACGTTATTGATTTTAGTCTTAAACAAGGCATGCAATGGCCGGCT
TTGATGCAAGCTCTGGCTTTAAGACCTGGCGGCCCGCCGGCTTTTCGTCTCACTGGCATC
GGCCCGCCGCAGCCGGACAACACCGACGCGTTGCAACAAGTGGGTTGGAAACTGGCTCAG
TTGGCTGACACTATTGGGGTTGAGTTCGAGTTCCGTGGGTTTGTCTGTAACAGTTTAGCC
GATCTTGAACCGGATATGCTTGATATCCGGCCGCCGGAAGTCGAAACCGTGGCTGTGAAT
TCGGTCTTTGAGCTTCATCGCCTCTTGGCTCGCCCCGGTGGAATTGAAAAAGTTGTTTCT
TCCATTAAAGCAATGAGGCCCAAGATTATTACAATAGTCGAACAAGAGGCGAACCACAAC
AGCCCGGTTTTTCTAGACCGGTTCACCGAAGCCTTGCATTATTACTCGAGTTTGTTCGAC
TCGTTGGAGGGGTCTGGGTTGACTCCACCGAGTCAAGACCAAGTGATGTCCGAGGTGTAC
TTAGGGAGACAGATATGTAACATCGTTGCTTGTGATGGAACCGATAGGAACGAGCGACAC
GAGACGTTGACTCAGTGGCGAACTCGGCTGGGTTCGGCCGGGTTCGAGCCGGTTCACCTG
GGTTCAAATGCGTATAAACAAGCCAGTATGTTGCTGGCTTTGTTTGCTGGTGGCGACGGG
TATAGAGTTGAGGAGAATAATGGTTGTCTGATGCTTGGGTGGCACACACGGCCGCTCATT
GCCACCTCGGCCTGGCAACTCGCCAAGTCCACTCTCGTGAGTTGAGTGAGCGAGTGAGAG
AGGAGGTTGAATACTTGGAGAGTTGGAACGAACAAATCCCCAGGCCAAGTATGTAATTTT
AGTTATTGTTGTTTCTCCCGTTAATTTTGATTTAATTTTTGTTTAACTGGTTGGATGATG
ACCTTTGCAATGTAATCTTCTTAGATTTTGAGGTGCGATCAAAATGAGGATGGATGTGTA
TTTTTTTTTTTTTTTTTTTTTTAACTTTTTAATAAAATGAGATCATCATTCTCAATCACG
TACGC