Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs6g16440.1
CDS Infomation

gene=Cs6g16440
Sequence

ATGGAAGAAGAACAAGAAGCACTGAACATTGACGCCTGCGAGGGAATGGACGTCGTCTTC
GAGAACTGCGGATCCTCGTCGAGGTTTTTCTCGCCGATAGTGTTTCTCGACGCGATATGG
AACATGGCTTTTGTTGTGGTGTCGGTGATTGTGCTTTTCTCAACTCTTAAAGAGAAACCC
GCCACTCCCTTGAGGGTTTGGGTTTCTGGCTATGCTCTGCAGTGCTTTTTGCATGTGGGT
TTTGTTTTTTTTGAGTATCGGAGGAAGAATTATTGCGGTCATCGTGTGGCCCTCGTTGTT
AACGGCCTTTCCCCCTCCCAAACTAGTCTCAGTGTTGTGAAAAGGTTGGGAGCGATGAAC
ACAATGATTTCGTCCATCTGGTGGGTGATTGGGTTCTACTGGATCGTCGTGGGGGGTCAA
GCATTGGTAAGGGATTCTCCTCGCCTGTACTGGGTAACTGTGGTCTTTCTAGCCTTTGAT
GTGTCCTTTGTAATCTTTTGCATCGGGATGGTATGTATCTTTTTCTTTGCTATCTTCTGT
TGCATTCCAATCGTAGCCCTTGTCTATGCTGTAGCAACTAGACAAGGTGCATCAGCAGAC
GATATTAGGAACCTTCCCAAGTATAGATACCGGTTGGCTAGTCATTTGAGGGCATCAAAT
AATAGTGAGAAGCAAGATGTCTTTGGGACAGAGACAGAAATGAGCAACAGTAACTCTACT
GATGAACTCGCGCTTCATCCTGAGGATTCTGATTGTTGCATTTGCCTTTCTCAATATGTA
GATGGGGCAGAGCTTTATACATTACCATGCAACCACCATTTTCATTGTGGATGCATCAGC
AAATGGCTTCGGATAAATGCGACTTGCCCTCTCTGCAAGTACAACATCCGAAGAGGCGAT
ACATTGGTGTGA

Peptide Sequence

PEP ID

Cs6g16440.1
PEP Infomation
Sequence

MEEEQEALNIDACEGMDVVFENCGSSSRFFSPIVFLDAIWNMAFVVVSVIVLFSTLKEKP
ATPLRVWVSGYALQCFLHVGFVFFEYRRKNYCGHRVALVVNGLSPSQTSLSVVKRLGAMN
TMISSIWWVIGFYWIVVGGQALVRDSPRLYWVTVVFLAFDVSFVIFCIGMVCIFFFAIFC
CIPIVALVYAVATRQGASADDIRNLPKYRYRLASHLRASNNSEKQDVFGTETEMSNSNST
DELALHPEDSDCCICLSQYVDGAELYTLPCNHHFHCGCISKWLRINATCPLCKYNIRRGD
TLV*

Transcript Sequence

Transcript ID

Cs6g16440.1
Transcript Infomation

gene=Cs6g16440 CDS=276-1187
Sequence

TTTGCGACATATCATTCACTTCGTTATCAACCAAAACAACCACAATTCCTCACATGCCTC
CTACCTTAACAATTAACAACCTCGCTGGACGGGACCCCACCCAATCATCAACCACTACCT
ACGTCGAAGGATAACGACGACGTTTCTCTATCGACTTTCCCAGACCTTCACTTCGCCAAA
TAATTCCATCACCAGGAGCTCTAGCTCAGCTCACACACAAAACACACTCTTATCAGTCAA
TCAATCAATCAAAATCAACCAAAGACTACCCAACAATGGAAGAAGAACAAGAAGCACTGA
ACATTGACGCCTGCGAGGGAATGGACGTCGTCTTCGAGAACTGCGGATCCTCGTCGAGGT
TTTTCTCGCCGATAGTGTTTCTCGACGCGATATGGAACATGGCTTTTGTTGTGGTGTCGG
TGATTGTGCTTTTCTCAACTCTTAAAGAGAAACCCGCCACTCCCTTGAGGGTTTGGGTTT
CTGGCTATGCTCTGCAGTGCTTTTTGCATGTGGGTTTTGTTTTTTTTGAGTATCGGAGGA
AGAATTATTGCGGTCATCGTGTGGCCCTCGTTGTTAACGGCCTTTCCCCCTCCCAAACTA
GTCTCAGTGTTGTGAAAAGGTTGGGAGCGATGAACACAATGATTTCGTCCATCTGGTGGG
TGATTGGGTTCTACTGGATCGTCGTGGGGGGTCAAGCATTGGTAAGGGATTCTCCTCGCC
TGTACTGGGTAACTGTGGTCTTTCTAGCCTTTGATGTGTCCTTTGTAATCTTTTGCATCG
GGATGGTATGTATCTTTTTCTTTGCTATCTTCTGTTGCATTCCAATCGTAGCCCTTGTCT
ATGCTGTAGCAACTAGACAAGGTGCATCAGCAGACGATATTAGGAACCTTCCCAAGTATA
GATACCGGTTGGCTAGTCATTTGAGGGCATCAAATAATAGTGAGAAGCAAGATGTCTTTG
GGACAGAGACAGAAATGAGCAACAGTAACTCTACTGATGAACTCGCGCTTCATCCTGAGG
ATTCTGATTGTTGCATTTGCCTTTCTCAATATGTAGATGGGGCAGAGCTTTATACATTAC
CATGCAACCACCATTTTCATTGTGGATGCATCAGCAAATGGCTTCGGATAAATGCGACTT
GCCCTCTCTGCAAGTACAACATCCGAAGAGGCGATACATTGGTGTGATCATCCCTCCTCC
GTTAGTTGAGAGGAGATCTCTAACTGAGGGAATACCAGAACAACCTATTCGGTTATCTTC
TTTTTGAGCAGCTATCTAATTCAGAAGAAGAAAAATGGAAAAAGGAAATAGTTCTTTATT
AGATGATTCCTTTCTTCTTAAAGTTTATATTTGTGAACCCTCTTTGTGTACAGAAATTTT
AATTTAATGTTGAAGCTTATTTTATGACAAGTGTATATTATGCTGTGTGGTTAAATAGGA
AAAACAGATTGGA