Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs6g05890.1
CDS Infomation

gene=Cs6g05890
Sequence

ATGGCTGGTAAAGGAGAAGGTCCAGCAATCGGCATTGACTTGGGCACGACTTACTCGTGC
GTTGGTGTGTGGCAACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACG
ACACCGTCTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCTAAGAAC
CAGGTCGCCATGAATCCTATCAATACCGTCTTTGATGCAAAGAGGTTGATTGGTCGTAGA
TTCAGTGACGCAACTGTCCAGAGTGACACTAAGTTGTGGCCATTCAAGGTTATAGCTGGT
GCTGGTGATAAGCCTATGATTGTGGTCACATACAAGGGTGAAGAGAAACAATTCGCTGCA
GAAGAGATCTCTTCCATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGA
TCTACAGTCAAGAATGCAGTGGTCACTGTCCCTGCTTACTTCAATGACTCTCAGCGTCAG
GCTACTAAGGATGCCGGTGTTATCGCCGGTCTTAATGTCATGCGTATCATCAATGAGCCC
ACAGCTGCAGCCATTGCCTATGGTCTTGACAAGAAGGCTACAAGTGTCGGCGAGAAGAAC
GTCTTGATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAG
GGTATCTTTGAAGTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGAT
AACAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGACATTAGT
GGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAGAGCTAAGAGGACTCTC
TCATCAACCGCCCAGACCACCATTGAGATTGACTCGCTTTACGAGGGTATTGACTTCTAC
TCCCCCATCACCCGTGCCAGATTTGAGGAACTTAACATGGATCTGTTCAGAAAATGCATG
GAGCCAGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCTCAGTCCATGATGTT
GTTCTTGTCGGAGGATCTACTAGGATTCCCAAAGTCCAGCAGCTTTTGCAAGATTTCTTT
AATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGCT
GTGCAAGCTGCTATCTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGATCTTCTGCTATTG
GATGTCACACCTCTCTCCCTTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATT
CCAAGGAACACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAAC
CAACCTGGTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCAGGGACAATAAC
TTGTTGGGTAAATTTGAGCTCTCTGGTATTCCCCCAGCTCCTAGGGGTGTTCCTCAAATC
ACTGTGTGCTTCGACATCGATGCCAATGGTATCCTGAACGTGTCTGCCGAGGACAAGACC
ACTGGTCAAAAGAACAAGATCACCATCACTAATGACAAAGGAAGACTTTCAAAGGATGAA
ATTGAGAAGATGGTTCAAGAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAG
AAGGTTGAGGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGAAG
GACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATTGAAGATGCGATC
GACCAGGCCATCCAATGGTTGGACAGCAACCAGCTTGCAGAGGCTGATGAGTTTGAGGAC
AAGATGAAGGAATTGGAGAGCATCTGCAACCCCATCATTGCAAAGATGTACCAGGGTGCC
GGTGGTGACATGGGTGGTGCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGC
CCCAAGATTGAGGAGGTCGACTAA

Peptide Sequence

PEP ID

Cs6g05890.1
PEP Infomation
Sequence

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAA
EEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
SPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFED
KMKELESICNPIIAKMYQGAGGDMGGAMDDDVPAGGSGAGPKIEEVD*

Transcript Sequence

Transcript ID

Cs6g05890.1
Transcript Infomation

gene=Cs6g05890 CDS=234-2177
Sequence

CGTCAATGTTTCCTTAGATCTGACGGTTTCCGAGACTCTAGGGGTTCGAACATTCTGGAA
TTCTAACCCTAAGCTTATAAAAACCGGCTCTTCTTCACTTTGTCCGCCACTTGAAACCCT
AGCTCTCTGTAGTTTTCTGTTTTCTAGATTTGCTTTTTTTGTTTTTTTGTTTTTTTGTTT
TCGCCCTCCTTTGAATTCTTCTTCGTCGACATAACAAAGAGAAAGCTGTAGGCATGGCTG
GTAAAGGAGAAGGTCCAGCAATCGGCATTGACTTGGGCACGACTTACTCGTGCGTTGGTG
TGTGGCAACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACGACACCGT
CTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCTAAGAACCAGGTCG
CCATGAATCCTATCAATACCGTCTTTGATGCAAAGAGGTTGATTGGTCGTAGATTCAGTG
ACGCAACTGTCCAGAGTGACACTAAGTTGTGGCCATTCAAGGTTATAGCTGGTGCTGGTG
ATAAGCCTATGATTGTGGTCACATACAAGGGTGAAGAGAAACAATTCGCTGCAGAAGAGA
TCTCTTCCATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGATCTACAG
TCAAGAATGCAGTGGTCACTGTCCCTGCTTACTTCAATGACTCTCAGCGTCAGGCTACTA
AGGATGCCGGTGTTATCGCCGGTCTTAATGTCATGCGTATCATCAATGAGCCCACAGCTG
CAGCCATTGCCTATGGTCTTGACAAGAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGA
TCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCT
TTGAAGTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAGAA
TGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGACATTAGTGGTAACC
CCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAGAGCTAAGAGGACTCTCTCATCAA
CCGCCCAGACCACCATTGAGATTGACTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
TCACCCGTGCCAGATTTGAGGAACTTAACATGGATCTGTTCAGAAAATGCATGGAGCCAG
TTGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCTCAGTCCATGATGTTGTTCTTG
TCGGAGGATCTACTAGGATTCCCAAAGTCCAGCAGCTTTTGCAAGATTTCTTTAATGGGA
AGGAGCTTTGCAAGAGCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGCTGTGCAAG
CTGCTATCTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCA
CACCTCTCTCCCTTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGA
ACACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAACCAACCTG
GTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GTAAATTTGAGCTCTCTGGTATTCCCCCAGCTCCTAGGGGTGTTCCTCAAATCACTGTGT
GCTTCGACATCGATGCCAATGGTATCCTGAACGTGTCTGCCGAGGACAAGACCACTGGTC
AAAAGAACAAGATCACCATCACTAATGACAAAGGAAGACTTTCAAAGGATGAAATTGAGA
AGATGGTTCAAGAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAGAAGGTTG
AGGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGAAGGACGAGA
AGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATTGAAGATGCGATCGACCAGG
CCATCCAATGGTTGGACAGCAACCAGCTTGCAGAGGCTGATGAGTTTGAGGACAAGATGA
AGGAATTGGAGAGCATCTGCAACCCCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTG
ACATGGGTGGTGCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCCCCAAGA
TTGAGGAGGTCGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTGTCTGTTGAGGGTTAAG
TTGGTAGGGTGATTAGATGTTTCGGAATTTTAATTTTATTTTCATGTTTTGACTTTTGGG
TTTTGATTGATCTTTTACAAGTCTGTTCAAAGCCCATTGCAAGTGTTCTCTATGTTTTCT
CAATATACTTTTTTTCATCTATTGCGGACATATATATTGTTGGACGCAGGGACTAGAACA
ACCCTGCTTGCTTATTCAATACTTTGAAACTTTTCTTACTAATTTATATTTAACTGCATG
AACTCTCCGACCCAAGTATGAGAATGGACGTGTAACGGTACGACGACAAAAATTTTTCAT
CTCTGTATATTATTACAGAAGCTGGCAATTTGACAAGATCAATTTATCTGATGCAACATA
ATACGAATAGACTAATGAGTAT