Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs6g04390.1
CDS Infomation

gene=Cs6g04390
Sequence

ATGATGTCTGGTAATGCTTTTACAATACCCTCTTCCTTAGGAGGGTTTGTTCATCAAGAA
CAAAATCCCAACCCTAACCCTAAACCTAATCAGGCTGCCAGTAAAAAGAAGAGGAATTTA
CCGGGAACTCCAGATCCAGATGCTGAGGTTATTGCTCTATCCCCAAAGACACTCATGGCA
ACCAACAGATTCATATGTGAAATATGCAATAAGGGTTTCCAAAGAGACCAAAACTTACAG
CTTCATCGAAGAGGACATAATCTTCCATGGAAGCTGAGGCAAAGAACCAACAAAGACGTC
ATCAAGAAGAAAGTTTATATCTGCCCAGAAAAGACTTGTGTTCATCACGAACCATCGAGG
GCTCTCGGTGATTTGACGGGTATAAAGAAGCATTTTAGCAGAAAACATGGAGAAAAGAAA
TGGAAGTGTGAGAAATGTTCAAAGAAATATGCAGTTCAATCTGACTGGAAAGCTCACTCC
AAGACTTGTGGCACCCGAGAGTATAAGTGTGATTGTGGCACTTTATTTTCCAGAAAAGAT
AGCTTCATTACGCACAGAGCTTTTTGTGACGCCTTAGCCGAAGAGAGCACAAGACTCGCT
TCATCAGTAGTTGCTGCTGCTTCAAATCTGAATTTCAGAACTGATCATACCGTAAATCTG
CCTCAGGGTGTACCCCAAGATGTTGCTGGCAGCATTTCTCAATTTGGATCCGGCTTTGCA
GGTTTGGCTGAGATGGTGCAAATCGGTTCAGTCAGTAATAATCTGTTTGGCTCGTCATCC
TCAAATATGGGTAATTTTGGTCATCAGTTTCAAGGCTTTCACAAGAGCATGGCTGGTGCT
ACTACAAATTCAAAAAGTGCAAATCTCACATTATTATCGGAATTAAAAGAAGAAACTTCT
TGTCTTTATAATTCTGATAGTACTCATGAAAACAAGCAATTAAAACCAGTGGCTGTCGGG
CCAATGTCAGCGACGGCGCTCTTGCAGAAAGCAGCTCAAATGGGTTCTACAAGAAGCAAT
AATAACCCAATTACTTCAATTTTCGGAAACGGCAGCGGCTTCAATAATGTGATGAGCTCT
TCTTCATCTTCGTCGAATGCAACAAGCTACAACAATAATACCTCTCTTCACAATACTAAT
CTCTCGGGATCAGCAGTTACTTTAGCCACAAGTGATGGAGTAATGGGTAGTTCAAATTTG
AGATCCATGAACACAACAACAACAGCAGCAGCAGTGGCAACAAGTGATACGCTTAATCAG
CTGATGATGATGCAAACAAGAGGAGATCAACAAAATGAACAACAACAACAAGTTCAATTG
AAGCTAACGAGAGATTTCCTTGGCATGACTAGCGGTAATCAGGTTCAATCCGTTCGTCCA
TTTCTGCCACAAGAGCTTGCAAATTTTGCCTCAAATATTGGATCAGTATCACCAATTGGC
TTAAGTCAATTCACTAGCAATAACTGA

Peptide Sequence

PEP ID

Cs6g04390.1
PEP Infomation
Sequence

MMSGNAFTIPSSLGGFVHQEQNPNPNPKPNQAASKKKRNLPGTPDPDAEVIALSPKTLMA
TNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSR
ALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKD
SFITHRAFCDALAEESTRLASSVVAAASNLNFRTDHTVNLPQGVPQDVAGSISQFGSGFA
GLAEMVQIGSVSNNLFGSSSSNMGNFGHQFQGFHKSMAGATTNSKSANLTLLSELKEETS
CLYNSDSTHENKQLKPVAVGPMSATALLQKAAQMGSTRSNNNPITSIFGNGSGFNNVMSS
SSSSSNATSYNNNTSLHNTNLSGSAVTLATSDGVMGSSNLRSMNTTTTAAAVATSDTLNQ
LMMMQTRGDQQNEQQQQVQLKLTRDFLGMTSGNQVQSVRPFLPQELANFASNIGSVSPIG
LSQFTSNN*

Transcript Sequence

Transcript ID

Cs6g04390.1
Transcript Infomation

gene=Cs6g04390 CDS=329-1795
Sequence

TAAGAAGAGCTTACAAAATAAGAGCAGATAATACTCTTCTTGAGATAGCAGCAATCATAA
GTTGTTGGAGTTTTCTTTTGAAATTGATCAAAACAAAACCAGATCTCTGTAACAAGAGTC
CGAAATATATTTTTGTTTTTAGATTAAAATTTTGAGTTTTTTTTTTCCTCCTTTCCTTCT
CTTTTCTTGTCTTTTGGCTTGAATCTCAGAGTCATCAGAATTTGAATATATATATATATA
TATACCAAACATTTATCAGCTTCTGTTTGGAGGAAAAAAAAAAGCACAAAACAAAACCCT
TAGTTTTTTGCACTTTGATAGCTTGCAAATGATGTCTGGTAATGCTTTTACAATACCCTC
TTCCTTAGGAGGGTTTGTTCATCAAGAACAAAATCCCAACCCTAACCCTAAACCTAATCA
GGCTGCCAGTAAAAAGAAGAGGAATTTACCGGGAACTCCAGATCCAGATGCTGAGGTTAT
TGCTCTATCCCCAAAGACACTCATGGCAACCAACAGATTCATATGTGAAATATGCAATAA
GGGTTTCCAAAGAGACCAAAACTTACAGCTTCATCGAAGAGGACATAATCTTCCATGGAA
GCTGAGGCAAAGAACCAACAAAGACGTCATCAAGAAGAAAGTTTATATCTGCCCAGAAAA
GACTTGTGTTCATCACGAACCATCGAGGGCTCTCGGTGATTTGACGGGTATAAAGAAGCA
TTTTAGCAGAAAACATGGAGAAAAGAAATGGAAGTGTGAGAAATGTTCAAAGAAATATGC
AGTTCAATCTGACTGGAAAGCTCACTCCAAGACTTGTGGCACCCGAGAGTATAAGTGTGA
TTGTGGCACTTTATTTTCCAGAAAAGATAGCTTCATTACGCACAGAGCTTTTTGTGACGC
CTTAGCCGAAGAGAGCACAAGACTCGCTTCATCAGTAGTTGCTGCTGCTTCAAATCTGAA
TTTCAGAACTGATCATACCGTAAATCTGCCTCAGGGTGTACCCCAAGATGTTGCTGGCAG
CATTTCTCAATTTGGATCCGGCTTTGCAGGTTTGGCTGAGATGGTGCAAATCGGTTCAGT
CAGTAATAATCTGTTTGGCTCGTCATCCTCAAATATGGGTAATTTTGGTCATCAGTTTCA
AGGCTTTCACAAGAGCATGGCTGGTGCTACTACAAATTCAAAAAGTGCAAATCTCACATT
ATTATCGGAATTAAAAGAAGAAACTTCTTGTCTTTATAATTCTGATAGTACTCATGAAAA
CAAGCAATTAAAACCAGTGGCTGTCGGGCCAATGTCAGCGACGGCGCTCTTGCAGAAAGC
AGCTCAAATGGGTTCTACAAGAAGCAATAATAACCCAATTACTTCAATTTTCGGAAACGG
CAGCGGCTTCAATAATGTGATGAGCTCTTCTTCATCTTCGTCGAATGCAACAAGCTACAA
CAATAATACCTCTCTTCACAATACTAATCTCTCGGGATCAGCAGTTACTTTAGCCACAAG
TGATGGAGTAATGGGTAGTTCAAATTTGAGATCCATGAACACAACAACAACAGCAGCAGC
AGTGGCAACAAGTGATACGCTTAATCAGCTGATGATGATGCAAACAAGAGGAGATCAACA
AAATGAACAACAACAACAAGTTCAATTGAAGCTAACGAGAGATTTCCTTGGCATGACTAG
CGGTAATCAGGTTCAATCCGTTCGTCCATTTCTGCCACAAGAGCTTGCAAATTTTGCCTC
AAATATTGGATCAGTATCACCAATTGGCTTAAGTCAATTCACTAGCAATAACTGAGATAA
AAACTTGTGAATGACGAGTGGGGCGCCGGTGGGGTTACTTAGCACTTAGAAGTGACCAAA
CAAACACTGAGCGAAGTTCAAGTGATGCATGATGTTGTATCGTACTCTCACTGTTGTTTT
CTTTCTCGTGTCTTAAAGCCTTTTAATTTTTATCGTATTTTGGTTCTACCTTTTTCATCT
TTATTGGAATTGAACAGCTAGCACAGAAAACTACGTAGCATTTGGTTGACCGTCAGTCAA
ACTTAAG