Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31960.1
CDS Infomation

gene=Cs5g31960
Sequence

ATGAGTATAAGAAGCTATTTTGGCATTAGAAAATCCAGTTTTTTGCTTGTACACCCAGAG
TTACCTGCTTTTACATGTTGGAGACCCCAGTTAGAATCTTTATCAACTTTTGGAATCACT
GGTAATCATGGAGGTGCGATTAGGTTGATTGCAAGGTCCCGGTACTCATTTGCCGATAGA
AATGTGGATGCATCTGTGCGCAATCCCAGCACTGTTCGTTTGGGTCGGAAGCAAGGAGGT
TCCTCATCTTTGTACAGTCGTCCTAGTATATTAGAGATGAAGAATGAGAGGATGGCAAAT
CGTGCCAAGGTCTATGATTTCTTGCAGGGCATTGGTATTGTTCCTGATGAGCTTGATGGG
TTAGAACTTCCTGTGACAGTTGAGGTTATGAGGGAACGTGTGGATTTCCTTCACAATTTA
GGGCTAACAATTGAAGACATAAACAACTACCCGCTGGTTCTTGGCTGCAGTGTGAAAAAG
AATATGATACCTGTGCTTGACTACCTTGGCAAATTAGGTGTTAGGAAATCCACTTTCACA
GAGTTCTTGAGAAGATACCCTCAAGTCCTCCACTCTAGTGTTGTTGTAGACCTTGCTCCA
GTGGTCAAGTATCTGCAAGGCTTGGATATCAAGCCGAATGATATTCCTCGGGTTCTTGAG
AGATATCCGGAAGTGTTGGGATTCAAACTTGAGGGGACCATGAGCACATCAGTGGCTTAT
TTGGTAGGAATTGGAGTGTCAAGAAGAGAAATTGGAGGTGTTTTAACTAGATACCCGGAT
ATTTTGGGCATGCGAGTAGGCCGGGTGATCAAACCTTTTGTGGAATATCTTGAAAGTTTG
GGTATTCCAAGATTAGCTGTAGCTAGATTGATAGAGAAGAAGCCTTACATTCTGGGATTT
GGATTAGAGGAGAGGGTGAAACCAAATGTTGAATCCCTTCTAGAGTTTAGTGTTAGAAAA
GAAGCACTTCCTGTAGTAGTGGCACAGTATCCTGAAATTATAGGAATAGACCTGAAACCT
AAGCTTCTTGGTCAGCAGAGTTTACTCAATTCAGCTATTGACTCAAGTTCCAAGGATTTT
GGCAGCATTGTTGAGAAGATGCCTCAAGTTGTGAATGCAAGTAATTCTGCTGTTACAAGG
CATGTGGATTTCCTAAAAAGCTGTGGATTCTTCTTGCAGCAAGTGAGACAGATAGTAGTG
GAGTGTCCCCAAGTGCTTGCATTGAATCTGGATATTATGAAATTGAGCTTTGATTACTTC
CAAAGGGAGATGCAAAGGCCTCTGGATGATTTGGTTGTTTTCCCAGCTTTCTTTACTTAT
GGTCTGGAGTCTACAATTAAGCCAAGACACAAAATGATCGCAAGGAAGGGTTTGCAATGT
TCCCTGTCATGGCTTCTTAACTGTTCTGATGAGAAGTTTAAGGAGCGGATGAACTATGAC
ACTATCGACCTGGAAGAGATGGATGCAATGCCATCATTTGACATGAATACACTGATGGAA
CAAAGGAGTGATGAGTCAGCTTCTGAATATGAGGAAGACAGTGATGATGAGTATGCCTGA

Peptide Sequence

PEP ID

Cs5g31960.1
PEP Infomation
Sequence

MSIRSYFGIRKSSFLLVHPELPAFTCWRPQLESLSTFGITGNHGGAIRLIARSRYSFADR
NVDASVRNPSTVRLGRKQGGSSSLYSRPSILEMKNERMANRAKVYDFLQGIGIVPDELDG
LELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFT
EFLRRYPQVLHSSVVVDLAPVVKYLQGLDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAY
LVGIGVSRREIGGVLTRYPDILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKKPYILGF
GLEERVKPNVESLLEFSVRKEALPVVVAQYPEIIGIDLKPKLLGQQSLLNSAIDSSSKDF
GSIVEKMPQVVNASNSAVTRHVDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYF
QREMQRPLDDLVVFPAFFTYGLESTIKPRHKMIARKGLQCSLSWLLNCSDEKFKERMNYD
TIDLEEMDAMPSFDMNTLMEQRSDESASEYEEDSDDEYA*

Transcript Sequence

Transcript ID

Cs5g31960.1
Transcript Infomation

gene=Cs5g31960 CDS=215-1774
Sequence

CATTAATATCTTATCTTGACAGCAAAAGGCGAAAGGAAAAGAAATCCCACTGTAAACGGC
TGCAGAAAGGACACTTGAAAGCATACAACGGAGCTAATTAACAGTAAGAAACCTTAGCCA
TTTCCGAGTCAGGGCTTAACTTCCGGCTCCCCTCCGGTCACCGAATACAGTCATATTTAC
CGACCTCCTCGAACAGATTGTTGCTTTTAAGAACATGAGTATAAGAAGCTATTTTGGCAT
TAGAAAATCCAGTTTTTTGCTTGTACACCCAGAGTTACCTGCTTTTACATGTTGGAGACC
CCAGTTAGAATCTTTATCAACTTTTGGAATCACTGGTAATCATGGAGGTGCGATTAGGTT
GATTGCAAGGTCCCGGTACTCATTTGCCGATAGAAATGTGGATGCATCTGTGCGCAATCC
CAGCACTGTTCGTTTGGGTCGGAAGCAAGGAGGTTCCTCATCTTTGTACAGTCGTCCTAG
TATATTAGAGATGAAGAATGAGAGGATGGCAAATCGTGCCAAGGTCTATGATTTCTTGCA
GGGCATTGGTATTGTTCCTGATGAGCTTGATGGGTTAGAACTTCCTGTGACAGTTGAGGT
TATGAGGGAACGTGTGGATTTCCTTCACAATTTAGGGCTAACAATTGAAGACATAAACAA
CTACCCGCTGGTTCTTGGCTGCAGTGTGAAAAAGAATATGATACCTGTGCTTGACTACCT
TGGCAAATTAGGTGTTAGGAAATCCACTTTCACAGAGTTCTTGAGAAGATACCCTCAAGT
CCTCCACTCTAGTGTTGTTGTAGACCTTGCTCCAGTGGTCAAGTATCTGCAAGGCTTGGA
TATCAAGCCGAATGATATTCCTCGGGTTCTTGAGAGATATCCGGAAGTGTTGGGATTCAA
ACTTGAGGGGACCATGAGCACATCAGTGGCTTATTTGGTAGGAATTGGAGTGTCAAGAAG
AGAAATTGGAGGTGTTTTAACTAGATACCCGGATATTTTGGGCATGCGAGTAGGCCGGGT
GATCAAACCTTTTGTGGAATATCTTGAAAGTTTGGGTATTCCAAGATTAGCTGTAGCTAG
ATTGATAGAGAAGAAGCCTTACATTCTGGGATTTGGATTAGAGGAGAGGGTGAAACCAAA
TGTTGAATCCCTTCTAGAGTTTAGTGTTAGAAAAGAAGCACTTCCTGTAGTAGTGGCACA
GTATCCTGAAATTATAGGAATAGACCTGAAACCTAAGCTTCTTGGTCAGCAGAGTTTACT
CAATTCAGCTATTGACTCAAGTTCCAAGGATTTTGGCAGCATTGTTGAGAAGATGCCTCA
AGTTGTGAATGCAAGTAATTCTGCTGTTACAAGGCATGTGGATTTCCTAAAAAGCTGTGG
ATTCTTCTTGCAGCAAGTGAGACAGATAGTAGTGGAGTGTCCCCAAGTGCTTGCATTGAA
TCTGGATATTATGAAATTGAGCTTTGATTACTTCCAAAGGGAGATGCAAAGGCCTCTGGA
TGATTTGGTTGTTTTCCCAGCTTTCTTTACTTATGGTCTGGAGTCTACAATTAAGCCAAG
ACACAAAATGATCGCAAGGAAGGGTTTGCAATGTTCCCTGTCATGGCTTCTTAACTGTTC
TGATGAGAAGTTTAAGGAGCGGATGAACTATGACACTATCGACCTGGAAGAGATGGATGC
AATGCCATCATTTGACATGAATACACTGATGGAACAAAGGAGTGATGAGTCAGCTTCTGA
ATATGAGGAAGACAGTGATGATGAGTATGCCTGAACTTATGAATCTGCGATTCAGAGAAT
GCGGTCCAGTTGGTCTTTATTTGTAGAGCTTCTGGCTTAATTTATCAAAAAGGCATGCCT
TGCTAGACTGCGAGAAGATATACCTGGTTTGTGGAGATACTGATATGAATTTCTATGATG
TAATACTTTTTTTTTTATGCTGATAAGTAATTTCAAAGCATTGGCCTAGTTTTAGGCAAT
TTATGTATGTGCGTGTATATACATTGAAGATGATAGGCATTTAGGTATTCATGAAAATTT
CAATAATTCTATGTTAATATGTGATTTCATGAGTTTGGAACTCATGATTCT