Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31840.1
CDS Infomation

gene=Cs5g31840
Sequence

ATGCCGATGGCGGCAGGGCTAGCATCGGAGGCGGATCGAGCGGCAGCAGCGGTGGGGCCG
GTGCAATCTCCACCGGTAGTGATGATGTCGGACGCGTTCGCCAAGGACGCGATCATCGCG
TGGTTCCGGGGAGAATTTGCGGCGGCGAACGCAATAATCGACGCTCTGTGCGGACACCTC
GCGGAGGTGAGAGGCGGCGGAGGGATAGGATCGGGATACGAGAAGGTTTTCGCGGCAATT
CATCGGAGGAGGATGAACTGGATCTCGGTGCTGCAGATGCAGAAGTACCACTCGATCGCT
GAGGTGACGCTCGAATTACGGAACGTGACCGAAAAGATGGTGGAAGAGAAGAAAGACGAC
GGTGAGAAAAAGGTTGACGAACTTAAGGAGTGTTTGGATAGTGAGAAATCCACGGAAAAT
GGCGAGAAAATGACAGAAAGTGAAAAAAAGTGTGAAGTTGAAGAAGAGACTGCGGTGGAA
GAAGATGATTCTCCTAACAGTGATATTACTGATTCAGGATCTCAAGAAATGCAGCCCATT
ACTGAAAATGTTGAGATATGTTCAAACCACGAAGAATGTGATGCACGGCGATCCCAAATC
AAGTTGACAAAAGGTTTTGCAGCCAAGGAGCAAGTGAAAGGCCATATGGTGAATGTTGTG
AAAGGGTTGAAGTTATATGAGGATGTGTTTACTGATTCAGAGCTCTCTATGTTAACTGAT
TATGTCAATGAACTTCGGCTGGCTGGCCAGAGCGGAGAACTGTCAGGTGAGACCTTTATT
TTATTCAACAAGCAGATGAAGGGAAACAGGAGAGAGCTCATTCGGTTTGGCATTCCTATT
TTCAGACACATAAAAGAGGAGGCCACAAGTAACAATGAAATTGGTAATCTAGAACCAATT
CCAGCTCTTCTTCAATCAGTCATTGATCACCTGGTTCAGTGGCAACTAATACCAGAGTAC
AAAAAACCCAATGGTTGCATCATTAACTTCTTTGATGAGGCAGAATATTCACAACCTTTT
CTGAAACCACCTCATCTGGACCAACCTATATCTACGCTTCTCCTGTCTGATTCAGCAATG
GCTTTTGGACGTAGTCTTGTTTGTGATAATGATGGGAACTATAAGGGGCAACTCATGCTT
TCACTGAAAGAAGGGTCACTCGTAGTGATGAGAGGAAACAGTGCTGACACAGCAAGGCAC
GTTATGTGCCCATCTCCAAACAAAAGAATCAGCATCACATTCTTCAGAGTCCGACCTGAG
TCCAACCAGAGCCAGTCTCCACCAACTACTCCAACTGGTACTATGAACGGCGCAATGGCT
CTGTGGCAACCAGGTGTCCCAAGTCCATATTCAGTGCCCAATGGCGCTCCAAGTGGCTAT
GAAGCAATGGATATGACGCCCAAATGGGGAGTACTTCGTGCCCCTGTGGTCATGTTAGCT
CCAGTGCGTCCTATGGCTTTGAGCCCTGGAAGAATGCCTCATGGTGGTACGGGGGTTTTC
TTGCCCTGGGCTGTGGGATCAAGAAAACCTGCCAAGCATCTTCCACCTCGTGCTCAGAAA
GGACGATTTCTTGCACTACCTTCCTCAGTTGTAGCAGAGTCTGCTCCTGAATCTGCCGTC
AGCGTTGAAGCTAAAGAGGTATGA

Peptide Sequence

PEP ID

Cs5g31840.1
PEP Infomation
Sequence

MPMAAGLASEADRAAAAVGPVQSPPVVMMSDAFAKDAIIAWFRGEFAAANAIIDALCGHL
AEVRGGGGIGSGYEKVFAAIHRRRMNWISVLQMQKYHSIAEVTLELRNVTEKMVEEKKDD
GEKKVDELKECLDSEKSTENGEKMTESEKKCEVEEETAVEEDDSPNSDITDSGSQEMQPI
TENVEICSNHEECDARRSQIKLTKGFAAKEQVKGHMVNVVKGLKLYEDVFTDSELSMLTD
YVNELRLAGQSGELSGETFILFNKQMKGNRRELIRFGIPIFRHIKEEATSNNEIGNLEPI
PALLQSVIDHLVQWQLIPEYKKPNGCIINFFDEAEYSQPFLKPPHLDQPISTLLLSDSAM
AFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVMCPSPNKRISITFFRVRPE
SNQSQSPPTTPTGTMNGAMALWQPGVPSPYSVPNGAPSGYEAMDMTPKWGVLRAPVVMLA
PVRPMALSPGRMPHGGTGVFLPWAVGSRKPAKHLPPRAQKGRFLALPSSVVAESAPESAV
SVEAKEV*

Transcript Sequence

Transcript ID

Cs5g31840.1
Transcript Infomation

gene=Cs5g31840 CDS=205-1848
Sequence

CCCCAAGCCCTCATTTTCCCCTTCCACTCTCTAAATCTCCACACAAGCCGATACTTTCCT
TTTATTTATTTATTTTCATTTTAACTGAGTTTTTGGTCCATAACCCAGCACGATACATCC
CGATATTTCGGAAACAAAATATTACCAGACCGAAAATAAAATATATAAAGTGAGCTCTTT
TTTCTCCAATCCTACTGACCAGTGATGCCGATGGCGGCAGGGCTAGCATCGGAGGCGGAT
CGAGCGGCAGCAGCGGTGGGGCCGGTGCAATCTCCACCGGTAGTGATGATGTCGGACGCG
TTCGCCAAGGACGCGATCATCGCGTGGTTCCGGGGAGAATTTGCGGCGGCGAACGCAATA
ATCGACGCTCTGTGCGGACACCTCGCGGAGGTGAGAGGCGGCGGAGGGATAGGATCGGGA
TACGAGAAGGTTTTCGCGGCAATTCATCGGAGGAGGATGAACTGGATCTCGGTGCTGCAG
ATGCAGAAGTACCACTCGATCGCTGAGGTGACGCTCGAATTACGGAACGTGACCGAAAAG
ATGGTGGAAGAGAAGAAAGACGACGGTGAGAAAAAGGTTGACGAACTTAAGGAGTGTTTG
GATAGTGAGAAATCCACGGAAAATGGCGAGAAAATGACAGAAAGTGAAAAAAAGTGTGAA
GTTGAAGAAGAGACTGCGGTGGAAGAAGATGATTCTCCTAACAGTGATATTACTGATTCA
GGATCTCAAGAAATGCAGCCCATTACTGAAAATGTTGAGATATGTTCAAACCACGAAGAA
TGTGATGCACGGCGATCCCAAATCAAGTTGACAAAAGGTTTTGCAGCCAAGGAGCAAGTG
AAAGGCCATATGGTGAATGTTGTGAAAGGGTTGAAGTTATATGAGGATGTGTTTACTGAT
TCAGAGCTCTCTATGTTAACTGATTATGTCAATGAACTTCGGCTGGCTGGCCAGAGCGGA
GAACTGTCAGGTGAGACCTTTATTTTATTCAACAAGCAGATGAAGGGAAACAGGAGAGAG
CTCATTCGGTTTGGCATTCCTATTTTCAGACACATAAAAGAGGAGGCCACAAGTAACAAT
GAAATTGGTAATCTAGAACCAATTCCAGCTCTTCTTCAATCAGTCATTGATCACCTGGTT
CAGTGGCAACTAATACCAGAGTACAAAAAACCCAATGGTTGCATCATTAACTTCTTTGAT
GAGGCAGAATATTCACAACCTTTTCTGAAACCACCTCATCTGGACCAACCTATATCTACG
CTTCTCCTGTCTGATTCAGCAATGGCTTTTGGACGTAGTCTTGTTTGTGATAATGATGGG
AACTATAAGGGGCAACTCATGCTTTCACTGAAAGAAGGGTCACTCGTAGTGATGAGAGGA
AACAGTGCTGACACAGCAAGGCACGTTATGTGCCCATCTCCAAACAAAAGAATCAGCATC
ACATTCTTCAGAGTCCGACCTGAGTCCAACCAGAGCCAGTCTCCACCAACTACTCCAACT
GGTACTATGAACGGCGCAATGGCTCTGTGGCAACCAGGTGTCCCAAGTCCATATTCAGTG
CCCAATGGCGCTCCAAGTGGCTATGAAGCAATGGATATGACGCCCAAATGGGGAGTACTT
CGTGCCCCTGTGGTCATGTTAGCTCCAGTGCGTCCTATGGCTTTGAGCCCTGGAAGAATG
CCTCATGGTGGTACGGGGGTTTTCTTGCCCTGGGCTGTGGGATCAAGAAAACCTGCCAAG
CATCTTCCACCTCGTGCTCAGAAAGGACGATTTCTTGCACTACCTTCCTCAGTTGTAGCA
GAGTCTGCTCCTGAATCTGCCGTCAGCGTTGAAGCTAAAGAGGTATGAAGTTAGCTCCAG
AAAGCCCTGAGGCTGCGGCAATGTGCGAAGAAAGTATCGTGCTTGTTCAATTCACACTCT
TAAGAAGCATCTCTCATTGTACAAACAGGCTCAAGTGCCGCTAGAGAAGTTGGTTTTTCT
TTTCATTTTTTGTTTTTGTTTTCCTCAGTAAGAATAGGTACTAGAGTTGGTCAGTGCACT
TTTTCTTGGATGCCAAACATGGCAGGATTTAGAGGTAGTTGAGCTCTAAGTCTTAAGGAG
TGTGAATTAGCTCTAAAGAGAGGCGGAATTTTTGTATTCGGTTCAGTTATTTATATCAAT
CTTATTTATCTAACAGATGGTATGACTTTCTAGTTGCACATGCTTAAGTTTCCTAATGAA
TCCACTTGGATATTTGCATAGGGTTTTGTAATTCTTGCTAGAAGGAAGAAAGCATGAGAA
GCAAACATTATAAAGTTAAAAACAGAAACGTTTATCTTTGAGAATGTTTTAGCCATAACC
AGCAAGTCACATATCTAGTTATATTGCTGTATGATGATGCTACATCAACTAAGTTGCAGT
CCTTGAATGGAATACTGTCTGATCTAATCTCCTCTTACTTAACCAAAATTTAAAATGTCC
ATGTACCTGCATCGTGTACTTAAATATTTATCTCCTGCACTAGCCGGAGAACATCTGAAA
CTCCCAATGCTG