Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31770.1
CDS Infomation

gene=Cs5g31770
Sequence

ATGGCTTCGGTGGTTCTTAGAAACCCTAACTCCAAGAGAATTGTGCCGTTTTCATCCCAA
ATCTACTCTTGCTGCCGCGGCTCTCTCTCCATCTCCGACGCTTTCTCCGCAAATGAAACT
TCTGCTACTCGCTGCGGCCCCTCTGTTAACCCCTGGTGGAGATCCATGGCCACCTTCACT
CGCACAAAGCTTCACGTGAATGTGGGAACAATTGGACACGTTGATCATGGGAAGACTACA
CTTACTGCTGCGATTACCAAGGTGCTAGCAGAAGAAGGGAAAGCAAAAGCTATTGCCTTT
GATGAAATTGACAAGGCCCCTGAAGAGAAGAAGAGAGGAATTACTATTGCAACGGCCCAT
GTAGAGTATGAGACTGCTAAGCGTCACTATGCACATGTTGACTGTCCTGGACATGCTGAT
TATGTTAAAAACATGATTACTGGAGCTGCCCAAATGGACGGTGGTATTTTGGTTGTCTCT
GCTCCTGACGGGCCAATGCCGCAGACAAAGGAGCATATTCTTCTTGCACGTCAGGTTGGT
GTGCCCTCACTTGTGTGCTTCCTAAACAAAGTTGATCTTGTTGAAGATGAAGAGTTGTTG
GAGCTTGTGGAAATGGAGCTCCGAGAACTTCTTAGCTTCTACAAGTTCCCTGGTGACGAA
ATACCCATTATTAGAGGCTCTGCTACATCAGCTTTACAGGGTAAAAATGAAGAAATAGGC
AAAAAGGCTATTTTAAAATTGATGGACGCTGTAGATGAGTACATTCCTGATCCAGAACGT
CAACTTGACAAGCCTTTTCTCATGCCAATTGAAGACGTTTTTTCAATTCAGGGACGTGGA
ACTGTTGCAACTGGTCGTGTTGAACAAGGGACCATCAAAGTTGGTGAAGAAGTTGAGGTT
TTGGGGTTAACACAGGGTCCTTCTTTGAAAACCACCGTAACCGGTGTTGAGATGTTCAAG
AAGATCTTGGATCGAGGGGAAGCTGGTGACAATGTTGGTCTTCTTTTACGTGGTTTGAAA
CGAGAAGATGTGCAACGAGGACAAGTGATTGCCAAGCCAGGATCTGTAAAGACATACAAG
AAATTTGAGGCTGAGATTTATGTCCTCACAAAGGATGAAGGTGGACGCCATACTGCCTTT
TTCTCAAACTATAGACCACAGATTTATTTGAGGACTGCAGATGTCACTGGAAAAGTAGAA
TTGCTTGGAGACGTTAAGATGGTTATGCCTGGTGATAATGTGAATGCAGCTTTTGAGCTG
ATATCACCCTTGCCTCTTCAACAAGGACAAAGATTTGCCTTGAGAGAAGGAGGCAGAACA
GTTGGTGCAGGTGTAGTCTCAAAAGCGCCTCCCCCGCGGGCGGTACAGCAGACTCGGAAT
GGGGCAAGACTTTGTGAGGGTCCTCGGGACGCTCGGGGGGCAAAACGTGTAGAGCCCCGC
CCAAAAATAGTGCCCGCAAGTGCGGGGGCCAAAACGTCCCTGGAGACCCCGAGACAGGTG
GGCTATAGCCTTGGTGGGGGCGGCGGGGGTGGCCTTCGCGGCACTCAGAATGGGACGAGA
CTTTGGGAGGGTCGTGGACTTACAATTTTTGCCGATGTCAAACTCACCAGTCATCACTAG

Peptide Sequence

PEP ID

Cs5g31770.1
PEP Infomation
Sequence

MASVVLRNPNSKRIVPFSSQIYSCCRGSLSISDAFSANETSATRCGPSVNPWWRSMATFT
RTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH
VEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVG
VPSLVCFLNKVDLVEDEELLELVEMELRELLSFYKFPGDEIPIIRGSATSALQGKNEEIG
KKAILKLMDAVDEYIPDPERQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEV
LGLTQGPSLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKREDVQRGQVIAKPGSVKTYK
KFEAEIYVLTKDEGGRHTAFFSNYRPQIYLRTADVTGKVELLGDVKMVMPGDNVNAAFEL
ISPLPLQQGQRFALREGGRTVGAGVVSKAPPPRAVQQTRNGARLCEGPRDARGAKRVEPR
PKIVPASAGAKTSLETPRQVGYSLGGGGGGGLRGTQNGTRLWEGRGLTIFADVKLTSHH*

Transcript Sequence

Transcript ID

Cs5g31770.1
Transcript Infomation

gene=Cs5g31770 CDS=1-1620
Sequence

ATGGCTTCGGTGGTTCTTAGAAACCCTAACTCCAAGAGAATTGTGCCGTTTTCATCCCAA
ATCTACTCTTGCTGCCGCGGCTCTCTCTCCATCTCCGACGCTTTCTCCGCAAATGAAACT
TCTGCTACTCGCTGCGGCCCCTCTGTTAACCCCTGGTGGAGATCCATGGCCACCTTCACT
CGCACAAAGCTTCACGTGAATGTGGGAACAATTGGACACGTTGATCATGGGAAGACTACA
CTTACTGCTGCGATTACCAAGGTGCTAGCAGAAGAAGGGAAAGCAAAAGCTATTGCCTTT
GATGAAATTGACAAGGCCCCTGAAGAGAAGAAGAGAGGAATTACTATTGCAACGGCCCAT
GTAGAGTATGAGACTGCTAAGCGTCACTATGCACATGTTGACTGTCCTGGACATGCTGAT
TATGTTAAAAACATGATTACTGGAGCTGCCCAAATGGACGGTGGTATTTTGGTTGTCTCT
GCTCCTGACGGGCCAATGCCGCAGACAAAGGAGCATATTCTTCTTGCACGTCAGGTTGGT
GTGCCCTCACTTGTGTGCTTCCTAAACAAAGTTGATCTTGTTGAAGATGAAGAGTTGTTG
GAGCTTGTGGAAATGGAGCTCCGAGAACTTCTTAGCTTCTACAAGTTCCCTGGTGACGAA
ATACCCATTATTAGAGGCTCTGCTACATCAGCTTTACAGGGTAAAAATGAAGAAATAGGC
AAAAAGGCTATTTTAAAATTGATGGACGCTGTAGATGAGTACATTCCTGATCCAGAACGT
CAACTTGACAAGCCTTTTCTCATGCCAATTGAAGACGTTTTTTCAATTCAGGGACGTGGA
ACTGTTGCAACTGGTCGTGTTGAACAAGGGACCATCAAAGTTGGTGAAGAAGTTGAGGTT
TTGGGGTTAACACAGGGTCCTTCTTTGAAAACCACCGTAACCGGTGTTGAGATGTTCAAG
AAGATCTTGGATCGAGGGGAAGCTGGTGACAATGTTGGTCTTCTTTTACGTGGTTTGAAA
CGAGAAGATGTGCAACGAGGACAAGTGATTGCCAAGCCAGGATCTGTAAAGACATACAAG
AAATTTGAGGCTGAGATTTATGTCCTCACAAAGGATGAAGGTGGACGCCATACTGCCTTT
TTCTCAAACTATAGACCACAGATTTATTTGAGGACTGCAGATGTCACTGGAAAAGTAGAA
TTGCTTGGAGACGTTAAGATGGTTATGCCTGGTGATAATGTGAATGCAGCTTTTGAGCTG
ATATCACCCTTGCCTCTTCAACAAGGACAAAGATTTGCCTTGAGAGAAGGAGGCAGAACA
GTTGGTGCAGGTGTAGTCTCAAAAGCGCCTCCCCCGCGGGCGGTACAGCAGACTCGGAAT
GGGGCAAGACTTTGTGAGGGTCCTCGGGACGCTCGGGGGGCAAAACGTGTAGAGCCCCGC
CCAAAAATAGTGCCCGCAAGTGCGGGGGCCAAAACGTCCCTGGAGACCCCGAGACAGGTG
GGCTATAGCCTTGGTGGGGGCGGCGGGGGTGGCCTTCGCGGCACTCAGAATGGGACGAGA
CTTTGGGAGGGTCGTGGACTTACAATTTTTGCCGATGTCAAACTCACCAGTCATCACTAG