Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31400.3
CDS Infomation

gene=Cs5g31400
Sequence

ATGGATGCTCCGCCGCCGAGTAGCCGTCTTCAAAGTATTCTCCAGGAGGCGGTGCAATCC
GTTCAGTGGACTTACAGCCTCTTTTGGCAAATCTGTCCTCAGCAAGGGATCTTAATATGG
GGAGATGGGTATTATAATGGAGCAATCAAGACTAGGAAAACAGTGCAGCCAATGGAGGTT
AGTGCTGAGGAGGCGTCTCTACAAAGAAGCCAGCAGCTAAGAGAGTTATACGAGTCACTT
TCCGCCGGAGAGACGAACCAGCCAACAAGGAGGCCATCTGCGGCTTTGTCGCCGGAGGAC
TTGACGGAGTCCGAATGGTTCTATTTGATGTGTGTTTCCTTCTCGTTTCCTTCCGGAGTT
GGGTTACCAGGAAAGGCATACGCAAGGCAGCAGCATGTATGGCTTACCGGAGCAAATGAG
GTCGACAGCAAAACTTTCTCTAGAGCAATTCTTGCCAAGACTGTGGTATGCATTCCTTTT
CTTGACGGAGTTGTTGAACTTGGCACAACAGAAAAGGTCCCGGAGGACCTTGCATTGGTT
CAACATGTGAAGAGCCTCTTCATTGATGACCACCAAGGCCACCTTCACCCACCAAAACCA
GCTCTCTCCGAGCACTCAACCTCAAATCCTGACACGTCATCCTGCCACCTGCGTTTTCAC
TCACAATCTATGTCCCCCATGTGCGCAGCTGTAAACGATGACCCGCCAGTCAACGCCAAC
CAAGGAGAAGAGGATGACGAAGAAGAAGACGACGACGACGACGACGAAGAGCAGGATCAG
TCCGACTCTGAAGCTGAAACGGGACGTAACAGCCGCCAAGGTGCAGCTGATCAAATCCCT
GAAGCCGTTGTCCCACCTGTACCGGAACCCAGTGAGCTTATGCAACTGGATATGTCCGAG
GATATCCGGCTCGGCTCGCCCGATGATGGTTCTAATAATTTGGACTCAGATTTTCATTTG
CTCGCAGTTAGCCAAGGAGTGAACCCGGCAGATGATCAACAGCAGCGAGGTGACTCGCAC
AGAGCCGAGTCGAGCCGGACATGGCCAATGGCATTACAGGAACCGGTTATGATAGGTAGC
AGTCTTCAACTACCTCCTTCAGGTTCAGGTCAAATTCCACCGGAAGAAGAATTGACGCCA
GAGGATACTCATTACTCGCAAACAATATCTACCATTCTTCAGAAGCAGCCAACTCGTTGG
GCCGAATCATCATACGTCACCTACTCCAGCACCCAATCAGCATTTGCCAAGTGGACAGAC
CGATCAGATCATCTCCTAGCCGTCCCCGTCCCTGTTGAAGGCACGTCACAGTGGGTATTG
AAGTACGTTTTGTTTACCGTACCATATCTGCACAGCAAATACCGTGACGAAAACTCACCA
AAGTTAGGTGACGTGGGTGGTGACCCAGCCTCGAGGTTCCGCAAAGGGACAGGGACCCCA
CAAGATGAGATGAGCGCCAACCACGTGCTGGCTGAGCGTCGCCGCCGAGAGAAACTCAAC
GAGAGGTTCATTATTTTGAGGTCGCTAGTCCCGTTCGTGACCAAAATGGACAAGGCCTCT
ATATTAGGTGACACTATTGAGTACGTGAAACAATTACGTAAAAAGATTCAGGACCTTGAG
TCCCGCAACATCAACAACCAAATATTGGAGGGTGATCAACGGTCAAGATCGGCGGATGGC
TCCAAAGATCAAAGAGTTTTGGACCGGAATGCACGGGTGGGTTCGGGGAAGAGGAAGCTG
AGGAAAGTGGAGGGAAGTGGTGGTGGTGCCAAACCGAAGAGCGTTGACTCACCGCCGCCC
CCGGTGGCTACATCTGTACAGGTTTCAATAATAGAGAGTGACGCATTGGTGGAGCTGCAA
TGTGGGAACAAAGAAGGGCTGTTGCTCGACATTATGCAAATGCTGAGGGAGCTGTTGATT
GAAGTTACTGCAGTTCAATCTTTTCTAACTAATGGAGTGTTTACAGCTCAGTTAAGGGCT
AAGGTGAAGGACAATGTAAACGGGAAGAAAGCAAGCATTGTGGAGGTTAAGAGGGCTATA
AATCAAATAATACCCCAGTATGTCAATTAA

Peptide Sequence

PEP ID

Cs5g31400.3
PEP Infomation
Sequence

MDAPPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEV
SAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGV
GLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALV
QHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNAN
QGEEDDEEEDDDDDDEEQDQSDSEAETGRNSRQGAADQIPEAVVPPVPEPSELMQLDMSE
DIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGS
SLQLPPSGSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTD
RSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTP
QDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE
SRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGAKPKSVDSPPP
PVATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRA
KVKDNVNGKKASIVEVKRAINQIIPQYVN*

Transcript Sequence

Transcript ID

Cs5g31400.3
Transcript Infomation

gene=Cs5g31400 CDS=302-2371
Sequence

TTCTATATGCATGTTACCTTCTCTTATCTTCTCTTCTATTCTTGAAGTCTTTCTTATAGC
TGCTAGCTAACCCTCCTTTCTCGTTTTCAGTTCCGATTAATCAAAGGCTTTGAACTGTAG
CTCGATCAGATCCTGATGTGACCGCTTTCTGCGTATTTACTTTCCTCATAAAACTCCCAA
GTGTTCTTCTCTTTCCCTTTCCCTTTTTTCATTCCCATTGGTGTCATAGTTAATTGAATC
CTAAGAAAGTAATTAAAAAAGAAGCAGAGAATCTCTGGCGGTGAATACAGTCGGTAAAGG
AATGGATGCTCCGCCGCCGAGTAGCCGTCTTCAAAGTATTCTCCAGGAGGCGGTGCAATC
CGTTCAGTGGACTTACAGCCTCTTTTGGCAAATCTGTCCTCAGCAAGGGATCTTAATATG
GGGAGATGGGTATTATAATGGAGCAATCAAGACTAGGAAAACAGTGCAGCCAATGGAGGT
TAGTGCTGAGGAGGCGTCTCTACAAAGAAGCCAGCAGCTAAGAGAGTTATACGAGTCACT
TTCCGCCGGAGAGACGAACCAGCCAACAAGGAGGCCATCTGCGGCTTTGTCGCCGGAGGA
CTTGACGGAGTCCGAATGGTTCTATTTGATGTGTGTTTCCTTCTCGTTTCCTTCCGGAGT
TGGGTTACCAGGAAAGGCATACGCAAGGCAGCAGCATGTATGGCTTACCGGAGCAAATGA
GGTCGACAGCAAAACTTTCTCTAGAGCAATTCTTGCCAAGACTGTGGTATGCATTCCTTT
TCTTGACGGAGTTGTTGAACTTGGCACAACAGAAAAGGTCCCGGAGGACCTTGCATTGGT
TCAACATGTGAAGAGCCTCTTCATTGATGACCACCAAGGCCACCTTCACCCACCAAAACC
AGCTCTCTCCGAGCACTCAACCTCAAATCCTGACACGTCATCCTGCCACCTGCGTTTTCA
CTCACAATCTATGTCCCCCATGTGCGCAGCTGTAAACGATGACCCGCCAGTCAACGCCAA
CCAAGGAGAAGAGGATGACGAAGAAGAAGACGACGACGACGACGACGAAGAGCAGGATCA
GTCCGACTCTGAAGCTGAAACGGGACGTAACAGCCGCCAAGGTGCAGCTGATCAAATCCC
TGAAGCCGTTGTCCCACCTGTACCGGAACCCAGTGAGCTTATGCAACTGGATATGTCCGA
GGATATCCGGCTCGGCTCGCCCGATGATGGTTCTAATAATTTGGACTCAGATTTTCATTT
GCTCGCAGTTAGCCAAGGAGTGAACCCGGCAGATGATCAACAGCAGCGAGGTGACTCGCA
CAGAGCCGAGTCGAGCCGGACATGGCCAATGGCATTACAGGAACCGGTTATGATAGGTAG
CAGTCTTCAACTACCTCCTTCAGGTTCAGGTCAAATTCCACCGGAAGAAGAATTGACGCC
AGAGGATACTCATTACTCGCAAACAATATCTACCATTCTTCAGAAGCAGCCAACTCGTTG
GGCCGAATCATCATACGTCACCTACTCCAGCACCCAATCAGCATTTGCCAAGTGGACAGA
CCGATCAGATCATCTCCTAGCCGTCCCCGTCCCTGTTGAAGGCACGTCACAGTGGGTATT
GAAGTACGTTTTGTTTACCGTACCATATCTGCACAGCAAATACCGTGACGAAAACTCACC
AAAGTTAGGTGACGTGGGTGGTGACCCAGCCTCGAGGTTCCGCAAAGGGACAGGGACCCC
ACAAGATGAGATGAGCGCCAACCACGTGCTGGCTGAGCGTCGCCGCCGAGAGAAACTCAA
CGAGAGGTTCATTATTTTGAGGTCGCTAGTCCCGTTCGTGACCAAAATGGACAAGGCCTC
TATATTAGGTGACACTATTGAGTACGTGAAACAATTACGTAAAAAGATTCAGGACCTTGA
GTCCCGCAACATCAACAACCAAATATTGGAGGGTGATCAACGGTCAAGATCGGCGGATGG
CTCCAAAGATCAAAGAGTTTTGGACCGGAATGCACGGGTGGGTTCGGGGAAGAGGAAGCT
GAGGAAAGTGGAGGGAAGTGGTGGTGGTGCCAAACCGAAGAGCGTTGACTCACCGCCGCC
CCCGGTGGCTACATCTGTACAGGTTTCAATAATAGAGAGTGACGCATTGGTGGAGCTGCA
ATGTGGGAACAAAGAAGGGCTGTTGCTCGACATTATGCAAATGCTGAGGGAGCTGTTGAT
TGAAGTTACTGCAGTTCAATCTTTTCTAACTAATGGAGTGTTTACAGCTCAGTTAAGGGC
TAAGGTGAAGGACAATGTAAACGGGAAGAAAGCAAGCATTGTGGAGGTTAAGAGGGCTAT
AAATCAAATAATACCCCAGTATGTCAATTAACTCACTCATAGCTATTTGTGAATTTTGTT
CAGGTGCTACTGACGAATTGTAATAATTTGGATAGCTGGGTAGATTTTTATAATAATAAT
AATAC